RNA–Protein interactions for RNA: ENST00000535659.6

CNN1-202, Transcript of calponin 1, humanhuman

TSL 2 BASIC

Gene CNN1, Length 1,527 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN1-202ENST00000535659 VIPR2P41587 438 aa16.21■□□□□ 0.19
CNN1-202ENST00000535659 CXCR3P49682 368 aa16.21■□□□□ 0.19
CNN1-202ENST00000535659 MESDQ14696 234 aa16.21■□□□□ 0.19
CNN1-202ENST00000535659 DDX42Q86XP3 938 aaKnown RBP eCLIP16.21■□□□□ 0.19
CNN1-202ENST00000535659 PLCD3Q8N3E9 789 aa16.21■□□□□ 0.19
CNN1-202ENST00000535659 RNF10Q8N5U6 811 aaKnown RBP16.21■□□□□ 0.19
CNN1-202ENST00000535659 NIPA2Q8N8Q9 360 aa16.21■□□□□ 0.19
CNN1-202ENST00000535659 SH3RF2Q8TEC5 729 aa16.21■□□□□ 0.19
CNN1-202ENST00000535659 RNF34Q969K3 372 aa16.21■□□□□ 0.19
CNN1-202ENST00000535659 E2F7Q96AV8 911 aa16.21■□□□□ 0.19
CNN1-202ENST00000535659 TRIM44Q96DX7 344 aaPredicted RBP16.21■□□□□ 0.19
CNN1-202ENST00000535659 SLC39A13Q96H72 371 aa16.21■□□□□ 0.19
CNN1-202ENST00000535659 RPGRIP1Q96KN7 1286 aa16.21■□□□□ 0.19
CNN1-202ENST00000535659 NCAPGQ9BPX3 1015 aa16.21■□□□□ 0.19
CNN1-202ENST00000535659 WDCPQ9H6R7 721 aa16.21■□□□□ 0.19
CNN1-202ENST00000535659 KIF9Q9HAQ2 790 aa16.21■□□□□ 0.19
CNN1-202ENST00000535659 ZFP14Q9HCL3 533 aa16.21■□□□□ 0.19
CNN1-202ENST00000535659 LZTFL1Q9NQ48 299 aa16.21■□□□□ 0.19
CNN1-202ENST00000535659 PIGVQ9NUD9 493 aa16.21■□□□□ 0.19
CNN1-202ENST00000535659 GUCA1BQ9UMX6 200 aa16.21■□□□□ 0.19
CNN1-202ENST00000535659 PAXBP1Q9Y5B6 917 aa16.21■□□□□ 0.19
CNN1-202ENST00000535659 DENND4AQ7Z401 1863 aa16.21■□□□□ 0.19
CNN1-202ENST00000535659 MACROD2A1Z1Q3 448 aa16.2■□□□□ 0.18
CNN1-202ENST00000535659 STC2O76061 302 aa16.2■□□□□ 0.18
CNN1-202ENST00000535659 PROSCO94903 275 aa16.2■□□□□ 0.18
CNN1-202ENST00000535659 IGLV3-27P01718 113 aa16.2■□□□□ 0.18
CNN1-202ENST00000535659 SLC2A3P11169 496 aa16.2■□□□□ 0.18
CNN1-202ENST00000535659 IL9P15248 144 aa16.2■□□□□ 0.18
CNN1-202ENST00000535659 TCF3P15923 654 aa16.2■□□□□ 0.18
CNN1-202ENST00000535659 SP100P23497 879 aaPredicted RBP16.2■□□□□ 0.18
CNN1-202ENST00000535659 CCR1P32246 355 aa16.2■□□□□ 0.18
CNN1-202ENST00000535659 KCNQ1P51787 676 aa16.2■□□□□ 0.18
CNN1-202ENST00000535659 HDAC4P56524 1084 aa16.2■□□□□ 0.18
CNN1-202ENST00000535659 RING1Q06587 406 aa16.2■□□□□ 0.18
CNN1-202ENST00000535659 IFI16Q16666 785 aaKnown RBP16.2■□□□□ 0.18
CNN1-202ENST00000535659 RAB6CQ53S08 254 aa16.2■□□□□ 0.18
CNN1-202ENST00000535659 ZC3H12AQ5D1E8 599 aaKnown RBP16.2■□□□□ 0.18
CNN1-202ENST00000535659 TANGO2Q6ICL3 276 aa16.2■□□□□ 0.18
CNN1-202ENST00000535659 UNC45BQ8IWX7 931 aa16.2■□□□□ 0.18
CNN1-202ENST00000535659 REXO1L1PQ8IX06 675 aa16.2■□□□□ 0.18
CNN1-202ENST00000535659 ARFGAP1Q8N6T3 406 aa16.2■□□□□ 0.18
CNN1-202ENST00000535659 TDRD5Q8NAT2 981 aaKnown RBP16.2■□□□□ 0.18
CNN1-202ENST00000535659 TPCN2Q8NHX9 752 aa16.2■□□□□ 0.18
CNN1-202ENST00000535659 ADAMTS19Q8TE59 1207 aa16.2■□□□□ 0.18
CNN1-202ENST00000535659 PLD4Q96BZ4 506 aa16.2■□□□□ 0.18
CNN1-202ENST00000535659 RAB6CQ9H0N0 254 aa16.2■□□□□ 0.18
CNN1-202ENST00000535659 OBP2AQ9NY56 170 aa16.2■□□□□ 0.18
CNN1-202ENST00000535659 CFAP97Q9P2B7 532 aa16.2■□□□□ 0.18
CNN1-202ENST00000535659 C2CD4DB7Z1M9 353 aa16.19■□□□□ 0.18
CNN1-202ENST00000535659 BUB1BO60566 1050 aaPredicted RBP16.19■□□□□ 0.18
CNN1-202ENST00000535659 IRF1P10914 325 aa16.19■□□□□ 0.18
CNN1-202ENST00000535659 FCARP24071 287 aa16.19■□□□□ 0.18
CNN1-202ENST00000535659 HARS2P49590 506 aaKnown RBP16.19■□□□□ 0.18
CNN1-202ENST00000535659 ATXN1P54253 815 aaKnown RBP16.19■□□□□ 0.18
CNN1-202ENST00000535659 PPP2R5DQ14738 602 aa16.19■□□□□ 0.18
CNN1-202ENST00000535659 ARHGAP29Q52LW3 1261 aa16.19■□□□□ 0.18
CNN1-202ENST00000535659 CC2D1AQ6P1N0 951 aaPredicted RBP16.19■□□□□ 0.18
CNN1-202ENST00000535659 SCYL2Q6P3W7 929 aa16.19■□□□□ 0.18
CNN1-202ENST00000535659 PARM1Q6UWI2 310 aa16.19■□□□□ 0.18
CNN1-202ENST00000535659 HTR3DQ70Z44 454 aa16.19■□□□□ 0.18
CNN1-202ENST00000535659 ZDHHC14Q8IZN3 488 aa16.19■□□□□ 0.18
CNN1-202ENST00000535659 TTC16Q8NEE8 873 aa16.19■□□□□ 0.18
CNN1-202ENST00000535659 ATXN2LQ8WWM7 1075 aaKnown RBP16.19■□□□□ 0.18
CNN1-202ENST00000535659 FCRL2Q96LA5 508 aaPredicted RBP16.19■□□□□ 0.18
CNN1-202ENST00000535659 LRRC3BQ96PB8 259 aa16.19■□□□□ 0.18
CNN1-202ENST00000535659 DCLK3Q9C098 648 aa16.19■□□□□ 0.18
CNN1-202ENST00000535659 TRMT1Q9NXH9 659 aaKnown RBP16.19■□□□□ 0.18
CNN1-202ENST00000535659 SLC12A6Q9UHW9 1150 aa16.19■□□□□ 0.18
CNN1-202ENST00000535659 SH3BP1Q9Y3L3 701 aa16.19■□□□□ 0.18
CNN1-202ENST00000535659 E2F8A0AVK6 867 aa16.19■□□□□ 0.18
CNN1-202ENST00000535659 TMEM110-MUSTN1A8MSY1 372 aa16.19■□□□□ 0.18
CNN1-202ENST00000535659 HEPACAM2A8MVW5 462 aa16.19■□□□□ 0.18
CNN1-202ENST00000535659 KCNU1A8MYU2 1149 aa16.19■□□□□ 0.18
CNN1-202ENST00000535659 ANHXE9PGG2 379 aa16.19■□□□□ 0.18
CNN1-202ENST00000535659 GREM1O60565 184 aa16.19■□□□□ 0.18
CNN1-202ENST00000535659 MAN1A1P33908 653 aa16.19■□□□□ 0.18
CNN1-202ENST00000535659 PCK1P35558 622 aa16.19■□□□□ 0.18
CNN1-202ENST00000535659 BRMS1LQ5PSV4 323 aa16.19■□□□□ 0.18
CNN1-202ENST00000535659 NUGGCQ68CJ6 796 aa16.19■□□□□ 0.18
CNN1-202ENST00000535659 MTSS1LQ765P7 747 aa16.19■□□□□ 0.18
CNN1-202ENST00000535659 FAM131BQ86XD5 332 aa16.19■□□□□ 0.18
CNN1-202ENST00000535659 ST13P5Q8NFI4 369 aaPredicted RBP16.19■□□□□ 0.18
CNN1-202ENST00000535659 FGF14Q92915 247 aa16.19■□□□□ 0.18
CNN1-202ENST00000535659 WBP2Q969T9 261 aa16.19■□□□□ 0.18
CNN1-202ENST00000535659 AZIN2Q96A70 460 aa16.19■□□□□ 0.18
CNN1-202ENST00000535659 ELSPBP1Q96BH3 223 aa16.19■□□□□ 0.18
CNN1-202ENST00000535659 RSPRY1Q96DX4 576 aa16.19■□□□□ 0.18
CNN1-202ENST00000535659 LIMD1Q9UGP4 676 aa16.19■□□□□ 0.18
CNN1-202ENST00000535659 ALG6Q9Y672 507 aa16.19■□□□□ 0.18
CNN1-202ENST00000535659 LRCH4O75427 683 aa16.18■□□□□ 0.18
CNN1-202ENST00000535659 ECI2O75521 394 aa16.18■□□□□ 0.18
CNN1-202ENST00000535659 MOCS3O95396 460 aa16.18■□□□□ 0.18
CNN1-202ENST00000535659 APOEP02649 317 aa16.18■□□□□ 0.18
CNN1-202ENST00000535659 KLKB1P03952 638 aa16.18■□□□□ 0.18
CNN1-202ENST00000535659 MIPP30301 263 aa16.18■□□□□ 0.18
CNN1-202ENST00000535659 SLC1A1P43005 524 aa16.18■□□□□ 0.18
CNN1-202ENST00000535659 MTA1Q13330 715 aa16.18■□□□□ 0.18
CNN1-202ENST00000535659 ZNF77Q15935 545 aa16.18■□□□□ 0.18
CNN1-202ENST00000535659 MFSD6LQ8IWD5 586 aa16.18■□□□□ 0.18
CNN1-202ENST00000535659 CCAR2Q8N163 923 aaKnown RBP16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms