RNA–Protein interactions for RNA: ENST00000535042.1

TMEM258-202, Transcript of transmembrane protein 258, humanhuman

TSL 3

Gene TMEM258, Length 921 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM258-202ENST00000535042 ARHGEF26Q96DR7 871 aa13.67□□□□□ -0.22
TMEM258-202ENST00000535042 P2RY11Q96G91 374 aa13.67□□□□□ -0.22
TMEM258-202ENST00000535042 TRIM7Q9C029 511 aa13.67□□□□□ -0.22
TMEM258-202ENST00000535042 EPHX3Q9H6B9 360 aa13.67□□□□□ -0.22
TMEM258-202ENST00000535042 FAM204AQ9H8W3 233 aa13.67□□□□□ -0.22
TMEM258-202ENST00000535042 TRPV5Q9NQA5 729 aa13.67□□□□□ -0.22
TMEM258-202ENST00000535042 HEBP1Q9NRV9 189 aa13.67□□□□□ -0.22
TMEM258-202ENST00000535042 DDIT4Q9NX09 232 aa13.67□□□□□ -0.22
TMEM258-202ENST00000535042 COX16Q9P0S2 106 aa13.67□□□□□ -0.22
TMEM258-202ENST00000535042 MYO1AQ9UBC5 1043 aa13.67□□□□□ -0.22
TMEM258-202ENST00000535042 LSM7Q9UK45 103 aaKnown RBP13.67□□□□□ -0.22
TMEM258-202ENST00000535042 TLR6Q9Y2C9 796 aa13.67□□□□□ -0.22
TMEM258-202ENST00000535042 KRBA1A5PL33 1030 aa13.66□□□□□ -0.22
TMEM258-202ENST00000535042 SOWAHDA6NJG2 315 aa13.66□□□□□ -0.22
TMEM258-202ENST00000535042 CYP17A1P05093 508 aa13.66□□□□□ -0.22
TMEM258-202ENST00000535042 PDGFRAP16234 1089 aa13.66□□□□□ -0.22
TMEM258-202ENST00000535042 SOX9P48436 509 aa13.66□□□□□ -0.22
TMEM258-202ENST00000535042 MRE11P49959 708 aa13.66□□□□□ -0.22
TMEM258-202ENST00000535042 KPNA1P52294 538 aaPredicted RBP13.66□□□□□ -0.22
TMEM258-202ENST00000535042 PFKPQ01813 784 aa13.66□□□□□ -0.22
TMEM258-202ENST00000535042 RING1Q06587 406 aa13.66□□□□□ -0.22
TMEM258-202ENST00000535042 NME3Q13232 169 aa13.66□□□□□ -0.22
TMEM258-202ENST00000535042 C15orf59Q2T9L4 293 aaPredicted RBP13.66□□□□□ -0.22
TMEM258-202ENST00000535042 SLC25A52Q3SY17 297 aa13.66□□□□□ -0.22
TMEM258-202ENST00000535042 SLC44A4Q53GD3 710 aa13.66□□□□□ -0.22
TMEM258-202ENST00000535042 RHBDF2Q6PJF5 856 aa13.66□□□□□ -0.22
TMEM258-202ENST00000535042 CHFRQ96EP1 664 aa13.66□□□□□ -0.22
TMEM258-202ENST00000535042 MCEEQ96PE7 176 aa13.66□□□□□ -0.22
TMEM258-202ENST00000535042 DCLK3Q9C098 648 aa13.66□□□□□ -0.22
TMEM258-202ENST00000535042 ECT2Q9H8V3 914 aa13.66□□□□□ -0.22
TMEM258-202ENST00000535042 ANLNQ9NQW6 1124 aa13.66□□□□□ -0.22
TMEM258-202ENST00000535042 PIGVQ9NUD9 493 aa13.66□□□□□ -0.22
TMEM258-202ENST00000535042 PARVAQ9NVD7 372 aa13.66□□□□□ -0.22
TMEM258-202ENST00000535042 RRN3Q9NYV6 651 aa13.66□□□□□ -0.22
TMEM258-202ENST00000535042 TBC1D14Q9P2M4 693 aa13.66□□□□□ -0.22
TMEM258-202ENST00000535042 WNT16Q9UBV4 365 aa13.66□□□□□ -0.22
TMEM258-202ENST00000535042 XPO7Q9UIA9 1087 aaKnown RBP13.66□□□□□ -0.22
TMEM258-202ENST00000535042 CA14Q9ULX7 337 aa13.66□□□□□ -0.22
TMEM258-202ENST00000535042 STAP1Q9ULZ2 295 aa13.66□□□□□ -0.22
TMEM258-202ENST00000535042 HELZP42694 1942 aaKnown RBP13.66□□□□□ -0.22
TMEM258-202ENST00000535042 COL4A3Q01955 1670 aa13.66□□□□□ -0.22
TMEM258-202ENST00000535042 TTC28Q96AY4 2481 aa13.65□□□□□ -0.22
TMEM258-202ENST00000535042 GOLGA6L7A0A1B0GV03 622 aa13.65□□□□□ -0.22
TMEM258-202ENST00000535042 ANKRD62A6NC57 917 aa13.65□□□□□ -0.22
TMEM258-202ENST00000535042 TMEM191CA6NGB0 347 aa13.65□□□□□ -0.22
TMEM258-202ENST00000535042 KCNU1A8MYU2 1149 aa13.65□□□□□ -0.22
TMEM258-202ENST00000535042 I6L893 689 aaPredicted RBP13.65□□□□□ -0.22
TMEM258-202ENST00000535042 SLC9A3R1O14745 358 aaPredicted RBP13.65□□□□□ -0.22
TMEM258-202ENST00000535042 ENDOD1O94919 500 aa13.65□□□□□ -0.22
TMEM258-202ENST00000535042 CYP1A2P05177 515 aa13.65□□□□□ -0.22
TMEM258-202ENST00000535042 MYBL1P10243 752 aa13.65□□□□□ -0.22
TMEM258-202ENST00000535042 ALADP13716 330 aa13.65□□□□□ -0.22
TMEM258-202ENST00000535042 GPD1P21695 349 aa13.65□□□□□ -0.22
TMEM258-202ENST00000535042 SDC4P31431 198 aa13.65□□□□□ -0.22
TMEM258-202ENST00000535042 PTPN9P43378 593 aa13.65□□□□□ -0.22
TMEM258-202ENST00000535042 HARS2P49590 506 aaKnown RBP13.65□□□□□ -0.22
TMEM258-202ENST00000535042 CXCR3P49682 368 aa13.65□□□□□ -0.22
TMEM258-202ENST00000535042 VCPP55072 806 aaKnown RBP13.65□□□□□ -0.22
TMEM258-202ENST00000535042 ATP11AP98196 1134 aa13.65□□□□□ -0.22
TMEM258-202ENST00000535042 DEUP1Q05D60 604 aa13.65□□□□□ -0.22
TMEM258-202ENST00000535042 SIGLEC14Q08ET2 396 aa13.65□□□□□ -0.22
TMEM258-202ENST00000535042 GSE1Q14687 1217 aa13.65□□□□□ -0.22
TMEM258-202ENST00000535042 DHCR24Q15392 516 aa13.65□□□□□ -0.22
TMEM258-202ENST00000535042 GAB4Q2WGN9 574 aa13.65□□□□□ -0.22
TMEM258-202ENST00000535042 ITPRIPL2Q3MIP1 535 aa13.65□□□□□ -0.22
TMEM258-202ENST00000535042 LY6G5CQ5SRR4 150 aa13.65□□□□□ -0.22
TMEM258-202ENST00000535042 NADSYN1Q6IA69 706 aa13.65□□□□□ -0.22
TMEM258-202ENST00000535042 RAD9BQ6WBX8 426 aa13.65□□□□□ -0.22
TMEM258-202ENST00000535042 TRIM67Q6ZTA4 783 aa13.65□□□□□ -0.22
TMEM258-202ENST00000535042 TMEM25Q86YD3 366 aa13.65□□□□□ -0.22
TMEM258-202ENST00000535042 TMTC1Q8IUR5 882 aa13.65□□□□□ -0.22
TMEM258-202ENST00000535042 FAM217AQ8IXS0 508 aa13.65□□□□□ -0.22
TMEM258-202ENST00000535042 CSGALNACT1Q8TDX6 532 aa13.65□□□□□ -0.22
TMEM258-202ENST00000535042 ATP2A3Q93084 1043 aa13.65□□□□□ -0.22
TMEM258-202ENST00000535042 OTUB2Q96DC9 234 aa13.65□□□□□ -0.22
TMEM258-202ENST00000535042 TRIM11Q96F44 468 aa13.65□□□□□ -0.22
TMEM258-202ENST00000535042 PGAP3Q96FM1 320 aaPredicted RBP13.65□□□□□ -0.22
TMEM258-202ENST00000535042 STOML2Q9UJZ1 356 aa13.65□□□□□ -0.22
TMEM258-202ENST00000535042 FBXL21Q9UKT6 434 aa13.65□□□□□ -0.22
TMEM258-202ENST00000535042 KIF26AQ9ULI4 1882 aaPredicted RBP13.65□□□□□ -0.22
TMEM258-202ENST00000535042 GFRA2O00451 464 aa13.64□□□□□ -0.23
TMEM258-202ENST00000535042 TRDMT1O14717 391 aaKnown RBP13.64□□□□□ -0.23
TMEM258-202ENST00000535042 CCP110O43303 1012 aa13.64□□□□□ -0.23
TMEM258-202ENST00000535042 ACSL4O60488 711 aa13.64□□□□□ -0.23
TMEM258-202ENST00000535042 LCA5LO95447 670 aa13.64□□□□□ -0.23
TMEM258-202ENST00000535042 NFATC1O95644 943 aa13.64□□□□□ -0.23
TMEM258-202ENST00000535042 MOCS2O96007 188 aaPredicted RBP13.64□□□□□ -0.23
TMEM258-202ENST00000535042 PDGFBP01127 241 aaPredicted RBP13.64□□□□□ -0.23
TMEM258-202ENST00000535042 H2AFZP0C0S5 128 aa13.64□□□□□ -0.23
TMEM258-202ENST00000535042 GBP1P32455 592 aa13.64□□□□□ -0.23
TMEM258-202ENST00000535042 ZNF143P52747 638 aaPredicted RBP13.64□□□□□ -0.23
TMEM258-202ENST00000535042 ZNF252P-AS1Q0IIN9 211 aa13.64□□□□□ -0.23
TMEM258-202ENST00000535042 MLF2Q15773 248 aaPredicted RBP13.64□□□□□ -0.23
TMEM258-202ENST00000535042 CDO1Q16878 200 aa13.64□□□□□ -0.23
TMEM258-202ENST00000535042 FAM133BQ5BKY9 247 aaKnown RBP13.64□□□□□ -0.23
TMEM258-202ENST00000535042 NUGGCQ68CJ6 796 aa13.64□□□□□ -0.23
TMEM258-202ENST00000535042 NAIF1Q69YI7 327 aaPredicted RBP13.64□□□□□ -0.23
TMEM258-202ENST00000535042 DCUN1D2Q6PH85 259 aa13.64□□□□□ -0.23
TMEM258-202ENST00000535042 TXNDC11Q6PKC3 985 aa13.64□□□□□ -0.23
TMEM258-202ENST00000535042 H2AFVQ71UI9 128 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms