RNA–Protein interactions for RNA: ENST00000533909.5

CAPN1-227, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 573 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-227ENST00000533909 GBP1P32455 592 aa13.94□□□□□ -0.18
CAPN1-227ENST00000533909 JAM2P57087 298 aa13.94□□□□□ -0.18
CAPN1-227ENST00000533909 ZNF445P59923 1031 aa13.94□□□□□ -0.18
CAPN1-227ENST00000533909 CDR2Q01850 454 aa13.94□□□□□ -0.18
CAPN1-227ENST00000533909 C10orf76Q5T2E6 689 aa13.94□□□□□ -0.18
CAPN1-227ENST00000533909 TRIM72Q6ZMU5 477 aa13.94□□□□□ -0.18
CAPN1-227ENST00000533909 MAMSTRQ6ZN01 415 aa13.94□□□□□ -0.18
CAPN1-227ENST00000533909 FAM183BPQ6ZVS7 135 aa13.94□□□□□ -0.18
CAPN1-227ENST00000533909 BEND5Q7L4P6 421 aa13.94□□□□□ -0.18
CAPN1-227ENST00000533909 C12orf40Q86WS4 652 aa13.94□□□□□ -0.18
CAPN1-227ENST00000533909 SLC20A1Q8WUM9 679 aa13.94□□□□□ -0.18
CAPN1-227ENST00000533909 C18orf8Q96DM3 657 aa13.94□□□□□ -0.18
CAPN1-227ENST00000533909 ASNSD1Q9NWL6 643 aa13.94□□□□□ -0.18
CAPN1-227ENST00000533909 PLK2Q9NYY3 685 aa13.94□□□□□ -0.18
CAPN1-227ENST00000533909 TJP2Q9UDY2 1190 aa13.94□□□□□ -0.18
CAPN1-227ENST00000533909 SLC12A6Q9UHW9 1150 aa13.94□□□□□ -0.18
CAPN1-227ENST00000533909 PCDHGA2Q9Y5H1 932 aa13.94□□□□□ -0.18
CAPN1-227ENST00000533909 R4GN57 208 aa13.94□□□□□ -0.18
CAPN1-227ENST00000533909 SYNJ2BP-COX16A0A087WUM0 186 aa13.93□□□□□ -0.18
CAPN1-227ENST00000533909 TEX33O43247 280 aa13.93□□□□□ -0.18
CAPN1-227ENST00000533909 CACNG3O60359 315 aa13.93□□□□□ -0.18
CAPN1-227ENST00000533909 TSPAN3O60637 253 aa13.93□□□□□ -0.18
CAPN1-227ENST00000533909 MOCS2O96007 188 aaPredicted RBP13.93□□□□□ -0.18
CAPN1-227ENST00000533909 TPM3P06753 285 aa13.93□□□□□ -0.18
CAPN1-227ENST00000533909 FERP16591 822 aa13.93□□□□□ -0.18
CAPN1-227ENST00000533909 TNFRSF4P43489 277 aa13.93□□□□□ -0.18
CAPN1-227ENST00000533909 DGKGP49619 791 aa13.93□□□□□ -0.18
CAPN1-227ENST00000533909 RNASE9P60153 205 aaKnown RBP13.93□□□□□ -0.18
CAPN1-227ENST00000533909 SLC6A3Q01959 620 aa13.93□□□□□ -0.18
CAPN1-227ENST00000533909 RING1Q06587 406 aa13.93□□□□□ -0.18
CAPN1-227ENST00000533909 NNTQ13423 1086 aa13.93□□□□□ -0.18
CAPN1-227ENST00000533909 GAS6Q14393 721 aa13.93□□□□□ -0.18
CAPN1-227ENST00000533909 TAF5Q15542 800 aa13.93□□□□□ -0.18
CAPN1-227ENST00000533909 GAB4Q2WGN9 574 aa13.93□□□□□ -0.18
CAPN1-227ENST00000533909 PTPN20Q4JDL3 420 aa13.93□□□□□ -0.18
CAPN1-227ENST00000533909 MPPE1Q53F39 396 aa13.93□□□□□ -0.18
CAPN1-227ENST00000533909 ADGRF1Q5T601 910 aa13.93□□□□□ -0.18
CAPN1-227ENST00000533909 FAM102AQ5T9C2 384 aaPredicted RBP13.93□□□□□ -0.18
CAPN1-227ENST00000533909 SYPL2Q5VXT5 272 aa13.93□□□□□ -0.18
CAPN1-227ENST00000533909 NAA35Q5VZE5 725 aa13.93□□□□□ -0.18
CAPN1-227ENST00000533909 HEATR6Q6AI08 1181 aaKnown RBP13.93□□□□□ -0.18
CAPN1-227ENST00000533909 TAC4Q86UU9 113 aa13.93□□□□□ -0.18
CAPN1-227ENST00000533909 CCDC117Q8IWD4 279 aaPredicted RBP13.93□□□□□ -0.18
CAPN1-227ENST00000533909 MAML2Q8IZL2 1156 aaPredicted RBP13.93□□□□□ -0.18
CAPN1-227ENST00000533909 CPXM2Q8N436 756 aa13.93□□□□□ -0.18
CAPN1-227ENST00000533909 CPA5Q8WXQ8 436 aa13.93□□□□□ -0.18
CAPN1-227ENST00000533909 TSPY26PQ9H489 355 aa13.93□□□□□ -0.18
CAPN1-227ENST00000533909 DDIT4Q9NX09 232 aa13.93□□□□□ -0.18
CAPN1-227ENST00000533909 ZSCAN32Q9NX65 697 aa13.93□□□□□ -0.18
CAPN1-227ENST00000533909 COX16Q9P0S2 106 aa13.93□□□□□ -0.18
CAPN1-227ENST00000533909 NOCTQ9UK39 431 aaKnown RBP13.93□□□□□ -0.18
CAPN1-227ENST00000533909 TLR6Q9Y2C9 796 aa13.93□□□□□ -0.18
CAPN1-227ENST00000533909 MYOFQ9NZM1 2061 aa13.92□□□□□ -0.18
CAPN1-227ENST00000533909 A0A1B0GTH6 734 aa13.92□□□□□ -0.18
CAPN1-227ENST00000533909 A0A1W2PQC6 194 aa13.92□□□□□ -0.18
CAPN1-227ENST00000533909 CHURC1-FNTBB4DL54 471 aa13.92□□□□□ -0.18
CAPN1-227ENST00000533909 GOLGA8SH3BPF8 625 aa13.92□□□□□ -0.18
CAPN1-227ENST00000533909 DAB1O75553 588 aa13.92□□□□□ -0.18
CAPN1-227ENST00000533909 TRUB2O95900 331 aaKnown RBP13.92□□□□□ -0.18
CAPN1-227ENST00000533909 FYNP06241 537 aa13.92□□□□□ -0.18
CAPN1-227ENST00000533909 SLC2A3P11169 496 aa13.92□□□□□ -0.18
CAPN1-227ENST00000533909 CDH5P33151 784 aaPredicted RBP13.92□□□□□ -0.18
CAPN1-227ENST00000533909 NBL1P41271 181 aa13.92□□□□□ -0.18
CAPN1-227ENST00000533909 NSFP46459 744 aaKnown RBP13.92□□□□□ -0.18
CAPN1-227ENST00000533909 UBASH3AP57075 661 aa13.92□□□□□ -0.18
CAPN1-227ENST00000533909 MRPS21P82921 87 aaKnown RBP13.92□□□□□ -0.18
CAPN1-227ENST00000533909 FANCCQ00597 558 aa13.92□□□□□ -0.18
CAPN1-227ENST00000533909 SDE2Q6IQ49 451 aa13.92□□□□□ -0.18
CAPN1-227ENST00000533909 OLFML1Q6UWY5 402 aa13.92□□□□□ -0.18
CAPN1-227ENST00000533909 SND1Q7KZF4 910 aaKnown RBP eCLIP13.92□□□□□ -0.18
CAPN1-227ENST00000533909 SLC26A9Q7LBE3 791 aa13.92□□□□□ -0.18
CAPN1-227ENST00000533909 TRMT11Q7Z4G4 463 aaKnown RBP13.92□□□□□ -0.18
CAPN1-227ENST00000533909 ETFBKMTQ8IXQ9 262 aa13.92□□□□□ -0.18
CAPN1-227ENST00000533909 DEFB106AQ8N104 65 aa13.92□□□□□ -0.18
CAPN1-227ENST00000533909 TERB1Q8NA31 727 aa13.92□□□□□ -0.18
CAPN1-227ENST00000533909 DDX1Q92499 740 aaKnown RBP13.92□□□□□ -0.18
CAPN1-227ENST00000533909 NKD2Q969F2 451 aaPredicted RBP13.92□□□□□ -0.18
CAPN1-227ENST00000533909 TMA16Q96EY4 203 aaKnown RBP13.92□□□□□ -0.18
CAPN1-227ENST00000533909 SEMA4AQ9H3S1 761 aa13.92□□□□□ -0.18
CAPN1-227ENST00000533909 STAP1Q9ULZ2 295 aa13.92□□□□□ -0.18
CAPN1-227ENST00000533909 K7EQS6 105 aa13.91□□□□□ -0.18
CAPN1-227ENST00000533909 ACSL4O60488 711 aa13.91□□□□□ -0.18
CAPN1-227ENST00000533909 PAPSS2O95340 614 aaPredicted RBP13.91□□□□□ -0.18
CAPN1-227ENST00000533909 KLF8O95600 359 aaPredicted RBP13.91□□□□□ -0.18
CAPN1-227ENST00000533909 PENKP01210 267 aaPredicted RBP13.91□□□□□ -0.18
CAPN1-227ENST00000533909 ABCB4P21439 1286 aa13.91□□□□□ -0.18
CAPN1-227ENST00000533909 TIE1P35590 1138 aa13.91□□□□□ -0.18
CAPN1-227ENST00000533909 NOMO3P69849 1222 aa13.91□□□□□ -0.18
CAPN1-227ENST00000533909 NME3Q13232 169 aa13.91□□□□□ -0.18
CAPN1-227ENST00000533909 DMC1Q14565 340 aa13.91□□□□□ -0.18
CAPN1-227ENST00000533909 NFKBIBQ15653 356 aa13.91□□□□□ -0.18
CAPN1-227ENST00000533909 PKN3Q6P5Z2 889 aa13.91□□□□□ -0.18
CAPN1-227ENST00000533909 SYT13Q7L8C5 426 aa13.91□□□□□ -0.18
CAPN1-227ENST00000533909 CCDC33Q8N5R6 958 aa13.91□□□□□ -0.18
CAPN1-227ENST00000533909 ALLCQ8N6M5 410 aa13.91□□□□□ -0.18
CAPN1-227ENST00000533909 ATP6V0D2Q8N8Y2 350 aa13.91□□□□□ -0.18
CAPN1-227ENST00000533909 USP33Q8TEY7 942 aa13.91□□□□□ -0.18
CAPN1-227ENST00000533909 EZH1Q92800 747 aaPredicted RBP13.91□□□□□ -0.18
CAPN1-227ENST00000533909 PIWIL1Q96J94 861 aaKnown RBP13.91□□□□□ -0.18
CAPN1-227ENST00000533909 NAP1L5Q96NT1 182 aaPredicted RBP13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms