RNA–Protein interactions for RNA: ENST00000533482.5

RAD50-209, Transcript of RAD50 double strand break repair protein, humanhuman

TSL 1 (best)

Gene RAD50, Length 4,373 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAD50-209ENST00000533482 AP1ARQ63HQ0 302 aa12.78□□□□□ -0.36
RAD50-209ENST00000533482 ADGRA3Q8IWK6 1321 aa12.78□□□□□ -0.36
RAD50-209ENST00000533482 ULK4Q96C45 1275 aa12.78□□□□□ -0.36
RAD50-209ENST00000533482 SLC8A2Q9UPR5 921 aa12.78□□□□□ -0.36
RAD50-209ENST00000533482 KLHL2O95198 593 aa12.78□□□□□ -0.36
RAD50-209ENST00000533482 SETSIPP0DME0 302 aa12.78□□□□□ -0.36
RAD50-209ENST00000533482 RALBP11234 206 aa12.78□□□□□ -0.36
RAD50-209ENST00000533482 CD52P31358 61 aa12.78□□□□□ -0.36
RAD50-209ENST00000533482 MMP13P45452 471 aa12.78□□□□□ -0.36
RAD50-209ENST00000533482 MAP2K5Q13163 448 aa12.78□□□□□ -0.36
RAD50-209ENST00000533482 ANGPTL8Q6UXH0 198 aa12.78□□□□□ -0.36
RAD50-209ENST00000533482 LMCD1Q9NZU5 365 aa12.78□□□□□ -0.36
RAD50-209ENST00000533482 GLRA3O75311 464 aa12.78□□□□□ -0.36
RAD50-209ENST00000533482 ALDH1A3P47895 512 aa12.78□□□□□ -0.36
RAD50-209ENST00000533482 HARS2P49590 506 aaKnown RBP12.78□□□□□ -0.36
RAD50-209ENST00000533482 FLT3LGP49771 235 aa12.78□□□□□ -0.36
RAD50-209ENST00000533482 NUDT2P50583 147 aa12.78□□□□□ -0.36
RAD50-209ENST00000533482 COPAP53621 1224 aa12.78□□□□□ -0.36
RAD50-209ENST00000533482 MAPRE1Q15691 268 aaKnown RBP12.78□□□□□ -0.36
RAD50-209ENST00000533482 DCAF12L1Q5VU92 463 aa12.78□□□□□ -0.36
RAD50-209ENST00000533482 TMEM192Q8IY95 271 aa12.78□□□□□ -0.36
RAD50-209ENST00000533482 NUP93Q8N1F7 819 aa12.78□□□□□ -0.36
RAD50-209ENST00000533482 TFAP2BQ92481 460 aa12.78□□□□□ -0.36
RAD50-209ENST00000533482 CMTM5Q96DZ9 223 aa12.78□□□□□ -0.36
RAD50-209ENST00000533482 LRRC40Q9H9A6 602 aa12.78□□□□□ -0.36
RAD50-209ENST00000533482 LRRC4CQ9HCJ2 640 aa12.78□□□□□ -0.36
RAD50-209ENST00000533482 SDK1Q7Z5N4 2213 aa12.78□□□□□ -0.36
RAD50-209ENST00000533482 DNAJC6O75061 913 aa12.77□□□□□ -0.36
RAD50-209ENST00000533482 ARIH2O95376 493 aa12.77□□□□□ -0.36
RAD50-209ENST00000533482 CKMP06732 381 aa12.77□□□□□ -0.36
RAD50-209ENST00000533482 ELF3P78545 371 aaPredicted RBP12.77□□□□□ -0.36
RAD50-209ENST00000533482 MPP3Q13368 585 aa12.77□□□□□ -0.36
RAD50-209ENST00000533482 BBS12Q6ZW61 710 aa12.77□□□□□ -0.36
RAD50-209ENST00000533482 LATS2Q9NRM7 1088 aa12.77□□□□□ -0.36
RAD50-209ENST00000533482 ST3GAL5Q9UNP4 418 aa12.77□□□□□ -0.36
RAD50-209ENST00000533482 RUVBL2Q9Y230 463 aaKnown RBP12.77□□□□□ -0.36
RAD50-209ENST00000533482 ATP11BQ9Y2G3 1177 aa12.77□□□□□ -0.36
RAD50-209ENST00000533482 CDY1Q9Y6F8 540 aa12.77□□□□□ -0.36
RAD50-209ENST00000533482 LRP6O75581 1613 aa12.77□□□□□ -0.36
RAD50-209ENST00000533482 CNTNAP1P78357 1384 aa12.77□□□□□ -0.36
RAD50-209ENST00000533482 TPST1O60507 370 aa12.77□□□□□ -0.37
RAD50-209ENST00000533482 CD48P09326 243 aa12.77□□□□□ -0.37
RAD50-209ENST00000533482 ZCCHC18P0CG32 403 aa12.77□□□□□ -0.37
RAD50-209ENST00000533482 ERVK-10P10266 1014 aa12.77□□□□□ -0.37
RAD50-209ENST00000533482 CPA3P15088 417 aa12.77□□□□□ -0.37
RAD50-209ENST00000533482 KCNA3P22001 575 aa12.77□□□□□ -0.37
RAD50-209ENST00000533482 RTP1P59025 263 aa12.77□□□□□ -0.37
RAD50-209ENST00000533482 C1orf127Q8N9H9 656 aa12.77□□□□□ -0.37
RAD50-209ENST00000533482 MRPL45Q9BRJ2 306 aaKnown RBP12.77□□□□□ -0.37
RAD50-209ENST00000533482 ZCWPW1Q9H0M4 648 aa12.77□□□□□ -0.37
RAD50-209ENST00000533482 NT5MQ9NPB1 228 aa12.77□□□□□ -0.37
RAD50-209ENST00000533482 RBM22Q9NW64 420 aaKnown RBP eCLIP12.77□□□□□ -0.37
RAD50-209ENST00000533482 GON4LQ3T8J9 2241 aa12.77□□□□□ -0.37
RAD50-209ENST00000533482 TM9SF1O15321 606 aa12.77□□□□□ -0.37
RAD50-209ENST00000533482 SEC24DO94855 1032 aaPredicted RBP12.77□□□□□ -0.37
RAD50-209ENST00000533482 PTPN1P18031 435 aaKnown RBP12.77□□□□□ -0.37
RAD50-209ENST00000533482 NNMTP40261 264 aa12.77□□□□□ -0.37
RAD50-209ENST00000533482 HADHAP40939 763 aa12.77□□□□□ -0.37
RAD50-209ENST00000533482 ESRRGP62508 458 aa12.77□□□□□ -0.37
RAD50-209ENST00000533482 MTFR1Q15390 333 aa12.77□□□□□ -0.37
RAD50-209ENST00000533482 SLC39A12Q504Y0 691 aa12.77□□□□□ -0.37
RAD50-209ENST00000533482 RNF148Q8N7C7 305 aa12.77□□□□□ -0.37
RAD50-209ENST00000533482 SHCBP1Q8NEM2 672 aa12.77□□□□□ -0.37
RAD50-209ENST00000533482 C7orf43Q8WVR3 580 aa12.77□□□□□ -0.37
RAD50-209ENST00000533482 NCLNQ969V3 563 aa12.77□□□□□ -0.37
RAD50-209ENST00000533482 CCDC138Q96M89 665 aa12.77□□□□□ -0.37
RAD50-209ENST00000533482 LGMNQ99538 433 aa12.77□□□□□ -0.37
RAD50-209ENST00000533482 ILKAPQ9H0C8 392 aaPredicted RBP12.77□□□□□ -0.37
RAD50-209ENST00000533482 TELO2Q9Y4R8 837 aa12.77□□□□□ -0.37
RAD50-209ENST00000533482 NDUFS3O75489 264 aa12.76□□□□□ -0.37
RAD50-209ENST00000533482 SUPT7LO94864 414 aa12.76□□□□□ -0.37
RAD50-209ENST00000533482 ZNF143P52747 638 aaPredicted RBP12.76□□□□□ -0.37
RAD50-209ENST00000533482 PDAP1Q13442 181 aaKnown RBP12.76□□□□□ -0.37
RAD50-209ENST00000533482 CNGA3Q16281 694 aa12.76□□□□□ -0.37
RAD50-209ENST00000533482 POLNQ7Z5Q5 900 aa12.76□□□□□ -0.37
RAD50-209ENST00000533482 GPR152Q8TDT2 470 aa12.76□□□□□ -0.37
RAD50-209ENST00000533482 GIPC2Q8TF65 315 aa12.76□□□□□ -0.37
RAD50-209ENST00000533482 ZNF516Q92618 1163 aa12.76□□□□□ -0.37
RAD50-209ENST00000533482 RNF157Q96PX1 679 aa12.76□□□□□ -0.37
RAD50-209ENST00000533482 TBCBQ99426 244 aa12.76□□□□□ -0.37
RAD50-209ENST00000533482 MRPL46Q9H2W6 279 aaKnown RBP12.76□□□□□ -0.37
RAD50-209ENST00000533482 VANGL2Q9ULK5 521 aa12.76□□□□□ -0.37
RAD50-209ENST00000533482 TRIM17Q9Y577 477 aa12.76□□□□□ -0.37
RAD50-209ENST00000533482 FAM237BA0A1B0GVD1 139 aa12.76□□□□□ -0.37
RAD50-209ENST00000533482 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.76□□□□□ -0.37
RAD50-209ENST00000533482 TBKBP1A7MCY6 615 aa12.76□□□□□ -0.37
RAD50-209ENST00000533482 MEI4A8MW99 385 aa12.76□□□□□ -0.37
RAD50-209ENST00000533482 NT5C1B-RDH14C9J2C7 533 aa12.76□□□□□ -0.37
RAD50-209ENST00000533482 FZD9O00144 591 aa12.76□□□□□ -0.37
RAD50-209ENST00000533482 F9P00740 461 aa12.76□□□□□ -0.37
RAD50-209ENST00000533482 ALDH2P05091 517 aa12.76□□□□□ -0.37
RAD50-209ENST00000533482 PTPN4P29074 926 aa12.76□□□□□ -0.37
RAD50-209ENST00000533482 WEE1P30291 646 aa12.76□□□□□ -0.37
RAD50-209ENST00000533482 BRCC3P46736 316 aa12.76□□□□□ -0.37
RAD50-209ENST00000533482 NME5P56597 212 aa12.76□□□□□ -0.37
RAD50-209ENST00000533482 TAF5Q15542 800 aa12.76□□□□□ -0.37
RAD50-209ENST00000533482 DUSP28Q4G0W2 176 aa12.76□□□□□ -0.37
RAD50-209ENST00000533482 LRRC38Q5VT99 294 aa12.76□□□□□ -0.37
RAD50-209ENST00000533482 PLEKHA7Q6IQ23 1121 aa12.76□□□□□ -0.37
RAD50-209ENST00000533482 CENPKQ9BS16 269 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms