RNA–Protein interactions for RNA: ENST00000533455.5

CTSB-228, Transcript of cathepsin B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTSB, Length 2,009 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-228ENST00000533455 TTC1Q99614 292 aa17.18■□□□□ 0.34
CTSB-228ENST00000533455 SNRNP25Q9BV90 132 aaKnown RBP17.18■□□□□ 0.34
CTSB-228ENST00000533455 TRIM4Q9C037 500 aa17.18■□□□□ 0.34
CTSB-228ENST00000533455 FAM124BQ9H5Z6 455 aaPredicted RBP17.18■□□□□ 0.34
CTSB-228ENST00000533455 HOXC10Q9NYD6 342 aa17.18■□□□□ 0.34
CTSB-228ENST00000533455 MAD1L1Q9Y6D9 718 aa17.18■□□□□ 0.34
CTSB-228ENST00000533455 B4GALT5O43286 388 aa17.17■□□□□ 0.34
CTSB-228ENST00000533455 GLRA3O75311 464 aa17.17■□□□□ 0.34
CTSB-228ENST00000533455 FGF3P11487 239 aaPredicted RBP17.17■□□□□ 0.34
CTSB-228ENST00000533455 BTKQ06187 659 aa17.17■□□□□ 0.34
CTSB-228ENST00000533455 CCNJLQ8IV13 435 aa17.17■□□□□ 0.34
CTSB-228ENST00000533455 FAM172AQ8WUF8 416 aa17.17■□□□□ 0.34
CTSB-228ENST00000533455 PDGFDQ9GZP0 370 aaPredicted RBP17.17■□□□□ 0.34
CTSB-228ENST00000533455 FAM96AQ9H5X1 160 aa17.17■□□□□ 0.34
CTSB-228ENST00000533455 CPSF2Q9P2I0 782 aaKnown RBP17.17■□□□□ 0.34
CTSB-228ENST00000533455 ITGA11Q9UKX5 1188 aa17.17■□□□□ 0.34
CTSB-228ENST00000533455 EMCNQ9ULC0 261 aa17.17■□□□□ 0.34
CTSB-228ENST00000533455 DNAJC16Q9Y2G8 782 aa17.17■□□□□ 0.34
CTSB-228ENST00000533455 MEI4A8MW99 385 aa17.16■□□□□ 0.34
CTSB-228ENST00000533455 LACTBL1A8MY62 500 aa17.16■□□□□ 0.34
CTSB-228ENST00000533455 LGR5O75473 907 aa17.16■□□□□ 0.34
CTSB-228ENST00000533455 USP1O94782 785 aa17.16■□□□□ 0.34
CTSB-228ENST00000533455 ALDH1A2O94788 518 aa17.16■□□□□ 0.34
CTSB-228ENST00000533455 BAG2O95816 211 aa17.16■□□□□ 0.34
CTSB-228ENST00000533455 PIM1P11309 404 aaPredicted RBP17.16■□□□□ 0.34
CTSB-228ENST00000533455 SEMA5AQ13591 1074 aa17.16■□□□□ 0.34
CTSB-228ENST00000533455 CA9Q16790 459 aa17.16■□□□□ 0.34
CTSB-228ENST00000533455 JADE1Q6IE81 842 aa17.16■□□□□ 0.34
CTSB-228ENST00000533455 ACAD11Q709F0 780 aa17.16■□□□□ 0.34
CTSB-228ENST00000533455 DEFB132Q7Z7B7 95 aa17.16■□□□□ 0.34
CTSB-228ENST00000533455 DHDDSQ86SQ9 333 aa17.16■□□□□ 0.34
CTSB-228ENST00000533455 NCAPG2Q86XI2 1143 aa17.16■□□□□ 0.34
CTSB-228ENST00000533455 TUBGCP5Q96RT8 1024 aa17.16■□□□□ 0.34
CTSB-228ENST00000533455 WRNIP1Q96S55 665 aa17.16■□□□□ 0.34
CTSB-228ENST00000533455 TRIM56Q9BRZ2 755 aaKnown RBP17.16■□□□□ 0.34
CTSB-228ENST00000533455 NRDE2Q9H7Z3 1164 aa17.16■□□□□ 0.34
CTSB-228ENST00000533455 DNAJC28Q9NX36 388 aa17.16■□□□□ 0.34
CTSB-228ENST00000533455 KIAA1257Q9ULG3 409 aa17.16■□□□□ 0.34
CTSB-228ENST00000533455 BARX2Q9UMQ3 279 aaPredicted RBP17.16■□□□□ 0.34
CTSB-228ENST00000533455 SCN4AP35499 1836 aa17.16■□□□□ 0.34
CTSB-228ENST00000533455 PFKMP08237 780 aa17.16■□□□□ 0.34
CTSB-228ENST00000533455 TGFB3P10600 412 aa17.16■□□□□ 0.34
CTSB-228ENST00000533455 MYL4P12829 197 aa17.16■□□□□ 0.34
CTSB-228ENST00000533455 ALOX15P16050 662 aaPredicted RBP17.16■□□□□ 0.34
CTSB-228ENST00000533455 XIAPP98170 497 aa17.16■□□□□ 0.34
CTSB-228ENST00000533455 PDE1BQ01064 536 aa17.16■□□□□ 0.34
CTSB-228ENST00000533455 MBTD1Q05BQ5 628 aa17.16■□□□□ 0.34
CTSB-228ENST00000533455 MAP1SQ66K74 1059 aaPredicted RBP17.16■□□□□ 0.34
CTSB-228ENST00000533455 PGM2L1Q6PCE3 622 aa17.16■□□□□ 0.34
CTSB-228ENST00000533455 RAPH1Q70E73 1250 aa17.16■□□□□ 0.34
CTSB-228ENST00000533455 PDSS2Q86YH6 399 aa17.16■□□□□ 0.34
CTSB-228ENST00000533455 TMEM130Q8N3G9 435 aa17.16■□□□□ 0.34
CTSB-228ENST00000533455 GSTCDQ8NEC7 633 aa17.16■□□□□ 0.34
CTSB-228ENST00000533455 PPP1R14CQ8TAE6 165 aa17.16■□□□□ 0.34
CTSB-228ENST00000533455 AFG1LQ8WV93 481 aa17.16■□□□□ 0.34
CTSB-228ENST00000533455 JADE3Q92613 823 aa17.16■□□□□ 0.34
CTSB-228ENST00000533455 APOL6Q9BWW8 343 aa17.16■□□□□ 0.34
CTSB-228ENST00000533455 HACL1Q9UJ83 578 aa17.16■□□□□ 0.34
CTSB-228ENST00000533455 TBC1D30Q9Y2I9 924 aa17.16■□□□□ 0.34
CTSB-228ENST00000533455 INO80B-WBP1J3KQ70 363 aa17.15■□□□□ 0.34
CTSB-228ENST00000533455 ITM2AO43736 263 aa17.15■□□□□ 0.34
CTSB-228ENST00000533455 TOP3BO95985 862 aaKnown RBP17.15■□□□□ 0.34
CTSB-228ENST00000533455 SLC1A6P48664 564 aa17.15■□□□□ 0.34
CTSB-228ENST00000533455 CDK7P50613 346 aa17.15■□□□□ 0.34
CTSB-228ENST00000533455 POLE2P56282 527 aa17.15■□□□□ 0.34
CTSB-228ENST00000533455 NIPAL4Q0D2K0 466 aa17.15■□□□□ 0.34
CTSB-228ENST00000533455 TMEM132AQ24JP5 1023 aa17.15■□□□□ 0.34
CTSB-228ENST00000533455 SCYL2Q6P3W7 929 aa17.15■□□□□ 0.34
CTSB-228ENST00000533455 OLFML1Q6UWY5 402 aa17.15■□□□□ 0.34
CTSB-228ENST00000533455 CDR2LQ86X02 465 aaPredicted RBP17.15■□□□□ 0.34
CTSB-228ENST00000533455 TTC39CQ8N584 583 aa17.15■□□□□ 0.34
CTSB-228ENST00000533455 SLC25A41Q8N5S1 370 aa17.15■□□□□ 0.34
CTSB-228ENST00000533455 OR6Y1Q8NGX8 325 aa17.15■□□□□ 0.34
CTSB-228ENST00000533455 NCSTNQ92542 709 aa17.15■□□□□ 0.34
CTSB-228ENST00000533455 QKIQ96PU8 341 aaKnown RBP eCLIP17.15■□□□□ 0.34
CTSB-228ENST00000533455 INO80BQ9C086 356 aaPredicted RBP17.15■□□□□ 0.34
CTSB-228ENST00000533455 NGRNQ9NPE2 291 aaKnown RBP17.15■□□□□ 0.34
CTSB-228ENST00000533455 TSPAN16Q9UKR8 245 aa17.15■□□□□ 0.34
CTSB-228ENST00000533455 APOBEC2Q9Y235 224 aaKnown RBP17.15■□□□□ 0.34
CTSB-228ENST00000533455 GPR25O00155 361 aa17.14■□□□□ 0.34
CTSB-228ENST00000533455 PIK3R2O00459 728 aa17.14■□□□□ 0.34
CTSB-228ENST00000533455 PLIN3O60664 434 aa17.14■□□□□ 0.34
CTSB-228ENST00000533455 LYPLA1O75608 230 aaPredicted RBP17.14■□□□□ 0.34
CTSB-228ENST00000533455 GRAP2O75791 330 aa17.14■□□□□ 0.34
CTSB-228ENST00000533455 SERPINE1P05121 402 aa17.14■□□□□ 0.34
CTSB-228ENST00000533455 CYP2F1P24903 491 aa17.14■□□□□ 0.34
CTSB-228ENST00000533455 SDC4P31431 198 aa17.14■□□□□ 0.34
CTSB-228ENST00000533455 COPAP53621 1224 aa17.14■□□□□ 0.34
CTSB-228ENST00000533455 RPL26P61254 145 aaKnown RBP17.14■□□□□ 0.34
CTSB-228ENST00000533455 RPL10AP62906 217 aaKnown RBP17.14■□□□□ 0.34
CTSB-228ENST00000533455 SLC25A3Q00325 362 aa17.14■□□□□ 0.34
CTSB-228ENST00000533455 NAB1Q13506 487 aa17.14■□□□□ 0.34
CTSB-228ENST00000533455 STILQ15468 1287 aa17.14■□□□□ 0.34
CTSB-228ENST00000533455 N4BP2L1Q5TBK1 243 aaPredicted RBP17.14■□□□□ 0.34
CTSB-228ENST00000533455 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.14■□□□□ 0.342e-23■□□□□ 11.3
CTSB-228ENST00000533455 VCX3BQ9H321 246 aa17.14■□□□□ 0.34
CTSB-228ENST00000533455 STK32BQ9NY57 414 aa17.14■□□□□ 0.34
CTSB-228ENST00000533455 SOWAHBA6NEL2 793 aa17.14■□□□□ 0.33
CTSB-228ENST00000533455 MAP3K6O95382 1288 aa17.14■□□□□ 0.33
CTSB-228ENST00000533455 STAU1O95793 577 aaKnown RBP17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms