RNA–Protein interactions for RNA: ENST00000533123.5

SMPD1-208, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 2,211 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-208ENST00000533123 NUDT5Q9UKK9 219 aa19.24■□□□□ 0.67
SMPD1-208ENST00000533123 UTP11Q9Y3A2 253 aaKnown RBP19.24■□□□□ 0.67
SMPD1-208ENST00000533123 LRRD1A4D1F6 860 aa19.23■□□□□ 0.67
SMPD1-208ENST00000533123 RFPL2O75678 378 aa19.23■□□□□ 0.67
SMPD1-208ENST00000533123 MIPP30301 263 aa19.23■□□□□ 0.67
SMPD1-208ENST00000533123 PLD1Q13393 1074 aa19.23■□□□□ 0.67
SMPD1-208ENST00000533123 DHX34Q14147 1143 aaKnown RBP19.23■□□□□ 0.67
SMPD1-208ENST00000533123 HLTFQ14527 1009 aaKnown RBP eCLIP19.23■□□□□ 0.67
SMPD1-208ENST00000533123 ADAM32Q8TC27 787 aa19.23■□□□□ 0.67
SMPD1-208ENST00000533123 TBCBQ99426 244 aa19.23■□□□□ 0.67
SMPD1-208ENST00000533123 NEUROG2Q9H2A3 272 aa19.23■□□□□ 0.67
SMPD1-208ENST00000533123 ABCC13Q9NSE7 274 aa19.23■□□□□ 0.67
SMPD1-208ENST00000533123 CALCOCO1Q9P1Z2 691 aa19.23■□□□□ 0.67
SMPD1-208ENST00000533123 ERICH4A6NGS2 130 aa19.23■□□□□ 0.67
SMPD1-208ENST00000533123 DPYSL4O14531 572 aa19.23■□□□□ 0.67
SMPD1-208ENST00000533123 SLC25A52Q3SY17 297 aa19.23■□□□□ 0.67
SMPD1-208ENST00000533123 PPM1LQ5SGD2 360 aa19.23■□□□□ 0.67
SMPD1-208ENST00000533123 SPOCD1Q6ZMY3 1216 aa19.23■□□□□ 0.67
SMPD1-208ENST00000533123 CCDC105Q8IYK2 499 aa19.23■□□□□ 0.67
SMPD1-208ENST00000533123 FAM172AQ8WUF8 416 aa19.23■□□□□ 0.67
SMPD1-208ENST00000533123 MRPL38Q96DV4 380 aaKnown RBP19.23■□□□□ 0.67
SMPD1-208ENST00000533123 RBM41Q96IZ5 413 aaKnown RBP19.23■□□□□ 0.67
SMPD1-208ENST00000533123 PEBP4Q96S96 227 aa19.23■□□□□ 0.67
SMPD1-208ENST00000533123 LRRC19Q9H756 370 aa19.23■□□□□ 0.67
SMPD1-208ENST00000533123 CCL16O15467 120 aa19.22■□□□□ 0.67
SMPD1-208ENST00000533123 RNF8O76064 485 aa19.22■□□□□ 0.67
SMPD1-208ENST00000533123 PTPN9P43378 593 aa19.22■□□□□ 0.67
SMPD1-208ENST00000533123 SULT1E1P49888 294 aa19.22■□□□□ 0.67
SMPD1-208ENST00000533123 ATXN1P54253 815 aaKnown RBP19.22■□□□□ 0.67
SMPD1-208ENST00000533123 EMBQ6PCB8 327 aa19.22■□□□□ 0.67
SMPD1-208ENST00000533123 POLNQ7Z5Q5 900 aa19.22■□□□□ 0.67
SMPD1-208ENST00000533123 SEC14L1Q92503 715 aa19.22■□□□□ 0.67
SMPD1-208ENST00000533123 MYRFLQ96LU7 910 aa19.22■□□□□ 0.67
SMPD1-208ENST00000533123 ZNF512Q96ME7 567 aaPredicted RBP19.22■□□□□ 0.67
SMPD1-208ENST00000533123 TLR8Q9NR97 1041 aaKnown RBP19.22■□□□□ 0.67
SMPD1-208ENST00000533123 STAP1Q9ULZ2 295 aa19.22■□□□□ 0.67
SMPD1-208ENST00000533123 COL4A4P53420 1690 aaPredicted RBP19.22■□□□□ 0.67
SMPD1-208ENST00000533123 SYNJ2BP-COX16A0A087WUM0 186 aa19.21■□□□□ 0.67
SMPD1-208ENST00000533123 A0A1W2PPC1 479 aa19.21■□□□□ 0.67
SMPD1-208ENST00000533123 C3orf70A6NLC5 250 aaPredicted RBP19.21■□□□□ 0.67
SMPD1-208ENST00000533123 CUL1Q13616 776 aa19.21■□□□□ 0.67
SMPD1-208ENST00000533123 ODF2Q5BJF6 829 aa19.21■□□□□ 0.67
SMPD1-208ENST00000533123 NT5C3BQ969T7 300 aa19.21■□□□□ 0.67
SMPD1-208ENST00000533123 NPY6RQ99463 290 aa19.21■□□□□ 0.67
SMPD1-208ENST00000533123 ERP44Q9BS26 406 aa19.21■□□□□ 0.67
SMPD1-208ENST00000533123 DCLK3Q9C098 648 aa19.21■□□□□ 0.67
SMPD1-208ENST00000533123 DDX56Q9NY93 547 aaKnown RBP19.21■□□□□ 0.67
SMPD1-208ENST00000533123 COX16Q9P0S2 106 aa19.21■□□□□ 0.67
SMPD1-208ENST00000533123 HPCAL4Q9UM19 191 aa19.21■□□□□ 0.67
SMPD1-208ENST00000533123 USP18Q9UMW8 372 aa19.21■□□□□ 0.67
SMPD1-208ENST00000533123 PRRC2BQ5JSZ5 2229 aaKnown RBP19.21■□□□□ 0.67
SMPD1-208ENST00000533123 DOCK6Q96HP0 2047 aa19.21■□□□□ 0.67
SMPD1-208ENST00000533123 EYSQ5T1H1 3165 aa19.21■□□□□ 0.67
SMPD1-208ENST00000533123 XIRP2A4UGR9 3374 aa19.21■□□□□ 0.67
SMPD1-208ENST00000533123 FAM187AA6NFU0 413 aa19.21■□□□□ 0.67
SMPD1-208ENST00000533123 M0QYT0 321 aa19.21■□□□□ 0.67
SMPD1-208ENST00000533123 FNTAP49354 379 aa19.21■□□□□ 0.67
SMPD1-208ENST00000533123 HDAC4P56524 1084 aa19.21■□□□□ 0.67
SMPD1-208ENST00000533123 ACAP1Q15027 740 aa19.21■□□□□ 0.67
SMPD1-208ENST00000533123 DUSP6Q16828 381 aa19.21■□□□□ 0.67
SMPD1-208ENST00000533123 HADHQ16836 314 aaKnown RBP19.21■□□□□ 0.67
SMPD1-208ENST00000533123 ZNF697Q5TEC3 545 aa19.21■□□□□ 0.67
SMPD1-208ENST00000533123 OTUD1Q5VV17 481 aaPredicted RBP19.21■□□□□ 0.67
SMPD1-208ENST00000533123 ITIH5Q86UX2 942 aa19.21■□□□□ 0.67
SMPD1-208ENST00000533123 ARHGAP18Q8N392 663 aa19.21■□□□□ 0.67
SMPD1-208ENST00000533123 CENPIQ92674 756 aaPredicted RBP19.21■□□□□ 0.67
SMPD1-208ENST00000533123 CAVIN3Q969G5 261 aa19.21■□□□□ 0.67
SMPD1-208ENST00000533123 TRMT2BQ96GJ1 504 aaKnown RBP19.21■□□□□ 0.67
SMPD1-208ENST00000533123 RAB17Q9H0T7 212 aa19.21■□□□□ 0.67
SMPD1-208ENST00000533123 ZNF334Q9HCZ1 680 aaPredicted RBP19.21■□□□□ 0.67
SMPD1-208ENST00000533123 C1RP00736 705 aa19.2■□□□□ 0.66
SMPD1-208ENST00000533123 KRT7P08729 469 aa19.2■□□□□ 0.66
SMPD1-208ENST00000533123 CD48P09326 243 aa19.2■□□□□ 0.66
SMPD1-208ENST00000533123 CDKN2BP42772 138 aa19.2■□□□□ 0.66
SMPD1-208ENST00000533123 NME3Q13232 169 aa19.2■□□□□ 0.66
SMPD1-208ENST00000533123 DUPD1Q68J44 220 aa19.2■□□□□ 0.66
SMPD1-208ENST00000533123 SCYL2Q6P3W7 929 aa19.2■□□□□ 0.66
SMPD1-208ENST00000533123 CYP4V2Q6ZWL3 525 aaPredicted RBP19.2■□□□□ 0.66
SMPD1-208ENST00000533123 TSEN2Q8NCE0 465 aaKnown RBP19.2■□□□□ 0.66
SMPD1-208ENST00000533123 HSPH1Q92598 858 aa19.2■□□□□ 0.66
SMPD1-208ENST00000533123 TRIM62Q9BVG3 475 aa19.2■□□□□ 0.66
SMPD1-208ENST00000533123 PRDM12Q9H4Q4 367 aa19.2■□□□□ 0.66
SMPD1-208ENST00000533123 IGFLR1Q9H665 355 aa19.2■□□□□ 0.66
SMPD1-208ENST00000533123 ASB3Q9Y575 518 aa19.2■□□□□ 0.66
SMPD1-208ENST00000533123 hCG_1818297A0A087WSY0 165 aa19.2■□□□□ 0.66
SMPD1-208ENST00000533123 TRUB2O95900 331 aaKnown RBP19.2■□□□□ 0.66
SMPD1-208ENST00000533123 TBX18O95935 607 aa19.2■□□□□ 0.66
SMPD1-208ENST00000533123 ZDHHC11BP0C7U3 371 aa19.2■□□□□ 0.66
SMPD1-208ENST00000533123 RARGP13631 454 aa19.2■□□□□ 0.66
SMPD1-208ENST00000533123 DESP17661 470 aa19.2■□□□□ 0.66
SMPD1-208ENST00000533123 PSEN1P49768 467 aa19.2■□□□□ 0.66
SMPD1-208ENST00000533123 BEND5Q7L4P6 421 aa19.2■□□□□ 0.66
SMPD1-208ENST00000533123 HS6ST3Q8IZP7 471 aa19.2■□□□□ 0.66
SMPD1-208ENST00000533123 RNF139Q8WU17 664 aa19.2■□□□□ 0.66
SMPD1-208ENST00000533123 MAIP1Q8WWC4 291 aa19.2■□□□□ 0.66
SMPD1-208ENST00000533123 TTYH1Q9H313 450 aaPredicted RBP19.2■□□□□ 0.66
SMPD1-208ENST00000533123 MTPAPQ9NVV4 582 aaKnown RBP eCLIP19.2■□□□□ 0.66
SMPD1-208ENST00000533123 SFMBT1Q9UHJ3 866 aa19.2■□□□□ 0.66
SMPD1-208ENST00000533123 SNX24Q9Y343 169 aa19.2■□□□□ 0.66
SMPD1-208ENST00000533123 PCK1P35558 622 aa19.19■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms