RNA–Protein interactions for RNA: ENST00000533115.5

SSSCA1-207, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3

Gene SSSCA1, Length 1,077 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-207ENST00000533115 ALDH1A2O94788 518 aa31.59■■■□□ 2.65
SSSCA1-207ENST00000533115 LATS1O95835 1130 aa31.59■■■□□ 2.65
SSSCA1-207ENST00000533115 MBD3O95983 291 aa31.59■■■□□ 2.65
SSSCA1-207ENST00000533115 NCAM1P13591 858 aa31.59■■■□□ 2.65
SSSCA1-207ENST00000533115 TGM1P22735 817 aa31.59■■■□□ 2.65
SSSCA1-207ENST00000533115 PTK2Q05397 1052 aa31.59■■■□□ 2.65
SSSCA1-207ENST00000533115 KCNMA1Q12791 1236 aa31.59■■■□□ 2.65
SSSCA1-207ENST00000533115 SASS6Q6UVJ0 657 aa31.59■■■□□ 2.65
SSSCA1-207ENST00000533115 KBTBD6Q86V97 674 aa31.59■■■□□ 2.65
SSSCA1-207ENST00000533115 TPSD1Q9BZJ3 242 aa31.59■■■□□ 2.65
SSSCA1-207ENST00000533115 STOML2Q9UJZ1 356 aa31.59■■■□□ 2.65
SSSCA1-207ENST00000533115 PCDHGC3Q9UN70 934 aa31.59■■■□□ 2.65
SSSCA1-207ENST00000533115 SLC27A6Q9Y2P4 619 aa31.59■■■□□ 2.65
SSSCA1-207ENST00000533115 E5RJQ4 531 aa31.58■■■□□ 2.65
SSSCA1-207ENST00000533115 FYNP06241 537 aa31.58■■■□□ 2.65
SSSCA1-207ENST00000533115 PDCLQ13371 301 aa31.58■■■□□ 2.65
SSSCA1-207ENST00000533115 EGFLAMQ63HQ2 1017 aa31.58■■■□□ 2.65
SSSCA1-207ENST00000533115 MDGA1Q8NFP4 955 aa31.58■■■□□ 2.65
SSSCA1-207ENST00000533115 DDI1Q8WTU0 396 aa31.58■■■□□ 2.65
SSSCA1-207ENST00000533115 FAM149B1Q96BN6 582 aa31.58■■■□□ 2.65
SSSCA1-207ENST00000533115 PARD6AQ9NPB6 346 aa31.58■■■□□ 2.65
SSSCA1-207ENST00000533115 PAPSS1O43252 624 aaPredicted RBP31.57■■■□□ 2.64
SSSCA1-207ENST00000533115 LRP3O75074 770 aa31.57■■■□□ 2.64
SSSCA1-207ENST00000533115 IGLV3-27P01718 113 aa31.57■■■□□ 2.64
SSSCA1-207ENST00000533115 CLCN1P35523 988 aa31.57■■■□□ 2.64
SSSCA1-207ENST00000533115 SPEM2Q0P670 501 aa31.57■■■□□ 2.64
SSSCA1-207ENST00000533115 USP39Q53GS9 565 aaKnown RBP31.57■■■□□ 2.64
SSSCA1-207ENST00000533115 CDKAL1Q5VV42 579 aa31.57■■■□□ 2.64
SSSCA1-207ENST00000533115 ZC3H10Q96K80 434 aaKnown RBP31.57■■■□□ 2.64
SSSCA1-207ENST00000533115 ANO10Q9NW15 660 aa31.57■■■□□ 2.64
SSSCA1-207ENST00000533115 TAB2Q9NYJ8 693 aa31.57■■■□□ 2.64
SSSCA1-207ENST00000533115 USP18Q9UMW8 372 aa31.57■■■□□ 2.64
SSSCA1-207ENST00000533115 DMXL1Q9Y485 3027 aa31.57■■■□□ 2.64
SSSCA1-207ENST00000533115 SPAG17Q6Q759 2223 aa31.56■■■□□ 2.64
SSSCA1-207ENST00000533115 PNMA6AP0CW24 399 aaPredicted RBP31.56■■■□□ 2.64
SSSCA1-207ENST00000533115 NTSR1P30989 418 aa31.56■■■□□ 2.64
SSSCA1-207ENST00000533115 MPPE1Q53F39 396 aa31.56■■■□□ 2.64
SSSCA1-207ENST00000533115 ADGRF1Q5T601 910 aa31.56■■■□□ 2.64
SSSCA1-207ENST00000533115 KLHDC7AQ5VTJ3 777 aa31.56■■■□□ 2.64
SSSCA1-207ENST00000533115 NUGGCQ68CJ6 796 aa31.56■■■□□ 2.64
SSSCA1-207ENST00000533115 BEND5Q7L4P6 421 aa31.56■■■□□ 2.64
SSSCA1-207ENST00000533115 UNC45BQ8IWX7 931 aa31.56■■■□□ 2.64
SSSCA1-207ENST00000533115 FAM71AQ8IYT1 594 aa31.56■■■□□ 2.64
SSSCA1-207ENST00000533115 WDTC1Q8N5D0 677 aa31.56■■■□□ 2.64
SSSCA1-207ENST00000533115 DQX1Q8TE96 717 aaKnown RBP31.56■■■□□ 2.64
SSSCA1-207ENST00000533115 LOXL4Q96JB6 756 aa31.56■■■□□ 2.64
SSSCA1-207ENST00000533115 TRIM62Q9BVG3 475 aa31.56■■■□□ 2.64
SSSCA1-207ENST00000533115 NAALADL1Q9UQQ1 740 aa31.56■■■□□ 2.64
SSSCA1-207ENST00000533115 DCLK1O15075 740 aa31.55■■■□□ 2.64
SSSCA1-207ENST00000533115 TSPAN3O60637 253 aa31.55■■■□□ 2.64
SSSCA1-207ENST00000533115 TBX4P57082 545 aa31.55■■■□□ 2.64
SSSCA1-207ENST00000533115 ZNF445P59923 1031 aa31.55■■■□□ 2.64
SSSCA1-207ENST00000533115 RING1Q06587 406 aa31.55■■■□□ 2.64
SSSCA1-207ENST00000533115 PLK5Q496M5 336 aa31.55■■■□□ 2.64
SSSCA1-207ENST00000533115 CCDC183Q5T5S1 534 aa31.55■■■□□ 2.64
SSSCA1-207ENST00000533115 C11orf57Q6ZUT1 292 aaPredicted RBP31.55■■■□□ 2.64
SSSCA1-207ENST00000533115 SLC47A2Q86VL8 602 aa31.55■■■□□ 2.64
SSSCA1-207ENST00000533115 PASD1Q8IV76 773 aa31.55■■■□□ 2.64
SSSCA1-207ENST00000533115 LSM14BQ9BX40 385 aaKnown RBP31.55■■■□□ 2.64
SSSCA1-207ENST00000533115 SLC2A11Q9BYW1 496 aa31.55■■■□□ 2.64
SSSCA1-207ENST00000533115 LHX5Q9H2C1 402 aa31.55■■■□□ 2.64
SSSCA1-207ENST00000533115 FHOD1Q9Y613 1164 aa31.55■■■□□ 2.64
SSSCA1-207ENST00000533115 TCRBV21S2A2A0A5A6 115 aa31.54■■■□□ 2.64
SSSCA1-207ENST00000533115 GFRA2O00451 464 aa31.54■■■□□ 2.64
SSSCA1-207ENST00000533115 HOXB2P14652 356 aa31.54■■■□□ 2.64
SSSCA1-207ENST00000533115 KRT9P35527 623 aa31.54■■■□□ 2.64
SSSCA1-207ENST00000533115 WASP42768 502 aa31.54■■■□□ 2.64
SSSCA1-207ENST00000533115 ID4P47928 161 aa31.54■■■□□ 2.64
SSSCA1-207ENST00000533115 RAPGEF1Q13905 1077 aa31.54■■■□□ 2.64
SSSCA1-207ENST00000533115 DRAP1Q14919 205 aaPredicted RBP31.54■■■□□ 2.64
SSSCA1-207ENST00000533115 STX1AQ16623 288 aa31.54■■■□□ 2.64
SSSCA1-207ENST00000533115 SDE2Q6IQ49 451 aa31.54■■■□□ 2.64
SSSCA1-207ENST00000533115 CHPFQ8IZ52 775 aa31.54■■■□□ 2.64
SSSCA1-207ENST00000533115 PIWIL1Q96J94 861 aaKnown RBP31.54■■■□□ 2.64
SSSCA1-207ENST00000533115 SERPINB11Q96P15 392 aa31.54■■■□□ 2.64
SSSCA1-207ENST00000533115 ACOX2Q99424 681 aa31.54■■■□□ 2.64
SSSCA1-207ENST00000533115 BCCIPQ9P287 314 aaKnown RBP eCLIP31.54■■■□□ 2.64
SSSCA1-207ENST00000533115 CLEC4EQ9ULY5 219 aa31.54■■■□□ 2.64
SSSCA1-207ENST00000533115 INVSQ9Y283 1065 aa31.54■■■□□ 2.64
SSSCA1-207ENST00000533115 CAPN9O14815 690 aa31.53■■■□□ 2.64
SSSCA1-207ENST00000533115 BPIFB4P59827 614 aa31.53■■■□□ 2.64
SSSCA1-207ENST00000533115 KRT31Q15323 416 aa31.53■■■□□ 2.64
SSSCA1-207ENST00000533115 GEN1Q17RS7 908 aa31.53■■■□□ 2.64
SSSCA1-207ENST00000533115 OLIG1Q8TAK6 271 aa31.53■■■□□ 2.64
SSSCA1-207ENST00000533115 HMGB4Q8WW32 186 aa31.53■■■□□ 2.64
SSSCA1-207ENST00000533115 AZIN2Q96A70 460 aa31.53■■■□□ 2.64
SSSCA1-207ENST00000533115 TMA16Q96EY4 203 aaKnown RBP31.53■■■□□ 2.64
SSSCA1-207ENST00000533115 PPP1R13BQ96KQ4 1090 aa31.53■■■□□ 2.64
SSSCA1-207ENST00000533115 CPXM1Q96SM3 734 aa31.53■■■□□ 2.64
SSSCA1-207ENST00000533115 NAA15Q9BXJ9 866 aaKnown RBP31.53■■■□□ 2.64
SSSCA1-207ENST00000533115 DUSP15Q9H1R2 295 aaPredicted RBP31.53■■■□□ 2.64
SSSCA1-207ENST00000533115 VPS16Q9H269 839 aa31.53■■■□□ 2.64
SSSCA1-207ENST00000533115 POPDC2Q9HBU9 364 aa31.53■■■□□ 2.64
SSSCA1-207ENST00000533115 FANCLQ9NW38 375 aa31.53■■■□□ 2.64
SSSCA1-207ENST00000533115 TJP2Q9UDY2 1190 aa31.53■■■□□ 2.64
SSSCA1-207ENST00000533115 TLR6Q9Y2C9 796 aa31.53■■■□□ 2.64
SSSCA1-207ENST00000533115 SDK1Q7Z5N4 2213 aa31.52■■■□□ 2.64
SSSCA1-207ENST00000533115 EPN2O95208 641 aa31.52■■■□□ 2.64
SSSCA1-207ENST00000533115 HOXD9P28356 352 aaPredicted RBP31.52■■■□□ 2.64
SSSCA1-207ENST00000533115 SLC11A2P49281 568 aa31.52■■■□□ 2.64
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms