RNA–Protein interactions for RNA: ENST00000533089.5

TGFBR3-210, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 1 (best)

Gene TGFBR3, Length 6,455 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-210ENST00000533089 SNAPC2Q13487 334 aa7.15□□□□□ -1.26
TGFBR3-210ENST00000533089 LRP8Q14114 963 aa7.15□□□□□ -1.26
TGFBR3-210ENST00000533089 SPDYE7PQ495Y7 208 aa7.15□□□□□ -1.26
TGFBR3-210ENST00000533089 PPP2R2DQ66LE6 453 aa7.15□□□□□ -1.26
TGFBR3-210ENST00000533089 RAD9BQ6WBX8 426 aa7.15□□□□□ -1.26
TGFBR3-210ENST00000533089 ZNF574Q6ZN55 896 aaPredicted RBP7.15□□□□□ -1.26
TGFBR3-210ENST00000533089 UNC13DQ70J99 1090 aa7.15□□□□□ -1.26
TGFBR3-210ENST00000533089 DDIASQ8IXT1 998 aa7.15□□□□□ -1.26
TGFBR3-210ENST00000533089 UXS1Q8NBZ7 420 aa7.15□□□□□ -1.26
TGFBR3-210ENST00000533089 PTPRN2Q92932 1015 aa7.15□□□□□ -1.26
TGFBR3-210ENST00000533089 ATXN7L3BQ96GX2 97 aa7.15□□□□□ -1.26
TGFBR3-210ENST00000533089 PARK7Q99497 189 aaKnown RBP7.15□□□□□ -1.26
TGFBR3-210ENST00000533089 COPS4Q9BT78 406 aa7.15□□□□□ -1.26
TGFBR3-210ENST00000533089 MUC3BQ9H195 1237 aa7.15□□□□□ -1.26
TGFBR3-210ENST00000533089 AIPL1Q9NZN9 384 aa7.15□□□□□ -1.26
TGFBR3-210ENST00000533089 ZNF70Q9UC06 446 aaPredicted RBP7.15□□□□□ -1.26
TGFBR3-210ENST00000533089 RAB19A4D1S5 217 aa7.15□□□□□ -1.26
TGFBR3-210ENST00000533089 FBP2O00757 339 aa7.15□□□□□ -1.26
TGFBR3-210ENST00000533089 CLUP10909 449 aa7.15□□□□□ -1.26
TGFBR3-210ENST00000533089 MAPK12P53778 367 aa7.15□□□□□ -1.26
TGFBR3-210ENST00000533089 RCAN1P53805 252 aa7.15□□□□□ -1.26
TGFBR3-210ENST00000533089 CDK17Q00537 523 aa7.15□□□□□ -1.26
TGFBR3-210ENST00000533089 COASYQ13057 564 aa7.15□□□□□ -1.26
TGFBR3-210ENST00000533089 RESTQ13127 1097 aa7.15□□□□□ -1.26
TGFBR3-210ENST00000533089 LDLRAP1Q5SW96 308 aa7.15□□□□□ -1.26
TGFBR3-210ENST00000533089 GALNT18Q6P9A2 607 aa7.15□□□□□ -1.26
TGFBR3-210ENST00000533089 RRM2BQ7LG56 351 aa7.15□□□□□ -1.26
TGFBR3-210ENST00000533089 TBC1D19Q8N5T2 526 aa7.15□□□□□ -1.26
TGFBR3-210ENST00000533089 SPATA18Q8TC71 538 aa7.15□□□□□ -1.26
TGFBR3-210ENST00000533089 SPIRE2Q8WWL2 714 aa7.15□□□□□ -1.26
TGFBR3-210ENST00000533089 FKBP14Q9NWM8 211 aa7.15□□□□□ -1.26
TGFBR3-210ENST00000533089 PRG3Q9Y2Y8 225 aaPredicted RBP7.15□□□□□ -1.26
TGFBR3-210ENST00000533089 SYNGAP1Q96PV0 1343 aa7.15□□□□□ -1.26
TGFBR3-210ENST00000533089 TFECO14948 347 aaPredicted RBP7.15□□□□□ -1.26
TGFBR3-210ENST00000533089 ZC3H11AO75152 810 aaKnown RBP eCLIP7.15□□□□□ -1.26
TGFBR3-210ENST00000533089 WFS1O76024 890 aa7.15□□□□□ -1.26
TGFBR3-210ENST00000533089 ZNF3P17036 446 aa7.15□□□□□ -1.26
TGFBR3-210ENST00000533089 OXCT1P55809 520 aa7.15□□□□□ -1.26
TGFBR3-210ENST00000533089 ROR1Q01973 937 aa7.15□□□□□ -1.26
TGFBR3-210ENST00000533089 SLC29A2Q14542 456 aa7.15□□□□□ -1.26
TGFBR3-210ENST00000533089 MAPRE2Q15555 327 aa7.15□□□□□ -1.26
TGFBR3-210ENST00000533089 TCHHL1Q5QJ38 904 aaPredicted RBP7.15□□□□□ -1.26
TGFBR3-210ENST00000533089 ARL6IP4Q66PJ3 421 aaKnown RBP7.15□□□□□ -1.26
TGFBR3-210ENST00000533089 KRT77Q7Z794 578 aa7.15□□□□□ -1.26
TGFBR3-210ENST00000533089 ZBED8Q8IZ13 594 aa7.15□□□□□ -1.26
TGFBR3-210ENST00000533089 PMEPA1Q969W9 287 aa7.15□□□□□ -1.26
TGFBR3-210ENST00000533089 SNF8Q96H20 258 aa7.15□□□□□ -1.26
TGFBR3-210ENST00000533089 TRIM62Q9BVG3 475 aa7.15□□□□□ -1.26
TGFBR3-210ENST00000533089 KATNAL1Q9BW62 490 aa7.15□□□□□ -1.26
TGFBR3-210ENST00000533089 COQ3Q9NZJ6 369 aa7.15□□□□□ -1.26
TGFBR3-210ENST00000533089 POFUT2Q9Y2G5 429 aa7.15□□□□□ -1.26
TGFBR3-210ENST00000533089 WDR19Q8NEZ3 1342 aa7.15□□□□□ -1.26
TGFBR3-210ENST00000533089 IFT172Q9UG01 1749 aa7.15□□□□□ -1.26
TGFBR3-210ENST00000533089 ATP9BO43861 1147 aa7.15□□□□□ -1.27
TGFBR3-210ENST00000533089 SIN3BO75182 1162 aa7.15□□□□□ -1.27
TGFBR3-210ENST00000533089 TOMM70O94826 608 aa7.15□□□□□ -1.27
TGFBR3-210ENST00000533089 CELF2O95319 508 aaKnown RBP7.15□□□□□ -1.27
TGFBR3-210ENST00000533089 NUP62P37198 522 aaPredicted RBP7.15□□□□□ -1.27
TGFBR3-210ENST00000533089 CASP4P49662 377 aa7.15□□□□□ -1.27
TGFBR3-210ENST00000533089 NLRP11P59045 1033 aaKnown RBP7.15□□□□□ -1.27
TGFBR3-210ENST00000533089 GPC5P78333 572 aa7.15□□□□□ -1.27
TGFBR3-210ENST00000533089 FOLH1Q04609 750 aa7.15□□□□□ -1.27
TGFBR3-210ENST00000533089 QPRTQ15274 297 aa7.15□□□□□ -1.27
TGFBR3-210ENST00000533089 TRIP4Q15650 581 aaPredicted RBP7.15□□□□□ -1.27
TGFBR3-210ENST00000533089 PRAMEF18Q5VWM3 479 aa7.15□□□□□ -1.27
TGFBR3-210ENST00000533089 ZNF746Q6NUN9 644 aaPredicted RBP7.15□□□□□ -1.27
TGFBR3-210ENST00000533089 CCDC137Q6PK04 289 aaKnown RBP7.15□□□□□ -1.27
TGFBR3-210ENST00000533089 C4orf22Q6V702 233 aa7.15□□□□□ -1.27
TGFBR3-210ENST00000533089 SMYD1Q8NB12 490 aa7.15□□□□□ -1.27
TGFBR3-210ENST00000533089 GTF3C2Q8WUA4 911 aaPredicted RBP7.15□□□□□ -1.27
TGFBR3-210ENST00000533089 PGBD4Q96DM1 585 aa7.15□□□□□ -1.27
TGFBR3-210ENST00000533089 RIBC2Q9H4K1 309 aa7.15□□□□□ -1.27
TGFBR3-210ENST00000533089 MYOZ2Q9NPC6 264 aa7.15□□□□□ -1.27
TGFBR3-210ENST00000533089 PCMTD2Q9NV79 361 aa7.15□□□□□ -1.27
TGFBR3-210ENST00000533089 TAGLN3Q9UI15 199 aa7.15□□□□□ -1.27
TGFBR3-210ENST00000533089 SNX6Q9UNH7 406 aa7.15□□□□□ -1.27
TGFBR3-210ENST00000533089 LRRC10BA6NIK2 292 aa7.15□□□□□ -1.27
TGFBR3-210ENST00000533089 MEI4A8MW99 385 aa7.15□□□□□ -1.27
TGFBR3-210ENST00000533089 ZNF879B4DU55 563 aa7.15□□□□□ -1.27
TGFBR3-210ENST00000533089 H0YJX3 145 aa7.15□□□□□ -1.27
TGFBR3-210ENST00000533089 ZNF197O14709 1029 aa7.15□□□□□ -1.27
TGFBR3-210ENST00000533089 ARIH2O95376 493 aa7.15□□□□□ -1.27
TGFBR3-210ENST00000533089 ANPEPP15144 967 aa7.15□□□□□ -1.27
TGFBR3-210ENST00000533089 ATF6P18850 670 aa7.15□□□□□ -1.27
TGFBR3-210ENST00000533089 MYBPC1Q00872 1141 aa7.15□□□□□ -1.27
TGFBR3-210ENST00000533089 PFKFB3Q16875 520 aaPredicted RBP7.15□□□□□ -1.27
TGFBR3-210ENST00000533089 C21orf62-AS1Q17RA5 79 aa7.15□□□□□ -1.27
TGFBR3-210ENST00000533089 QRICH1Q2TAL8 776 aa7.15□□□□□ -1.27
TGFBR3-210ENST00000533089 METTL21CQ5VZV1 264 aa7.15□□□□□ -1.27
TGFBR3-210ENST00000533089 KRT39Q6A163 491 aa7.15□□□□□ -1.27
TGFBR3-210ENST00000533089 C11orf88Q6PI97 169 aa7.15□□□□□ -1.27
TGFBR3-210ENST00000533089 TBC1D10CQ8IV04 446 aa7.15□□□□□ -1.27
TGFBR3-210ENST00000533089 CYP4X1Q8N118 509 aa7.15□□□□□ -1.27
TGFBR3-210ENST00000533089 GPD1LQ8N335 351 aa7.15□□□□□ -1.27
TGFBR3-210ENST00000533089 FAM45AQ8TCE6 357 aa7.15□□□□□ -1.27
TGFBR3-210ENST00000533089 HELQQ8TDG4 1101 aa7.15□□□□□ -1.27
TGFBR3-210ENST00000533089 UCMAQ8WVF2 138 aa7.15□□□□□ -1.27
TGFBR3-210ENST00000533089 USP13Q92995 863 aaPredicted RBP7.15□□□□□ -1.27
TGFBR3-210ENST00000533089 TBCCD1Q9NVR7 557 aa7.15□□□□□ -1.27
TGFBR3-210ENST00000533089 AGO2Q9UKV8 859 aaKnown RBP7.15□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms