RNA–Protein interactions for RNA: ENST00000532463.5

CTNND1-231, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,749 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-231ENST00000532463 SSR3Q9UNL2 185 aa8.32□□□□□ -1.08
CTNND1-231ENST00000532463 FDPSP14324 419 aaKnown RBP8.32□□□□□ -1.08
CTNND1-231ENST00000532463 IFNAR1P17181 557 aa8.32□□□□□ -1.08
CTNND1-231ENST00000532463 RPL5P46777 297 aaKnown RBP8.32□□□□□ -1.08
CTNND1-231ENST00000532463 RHEBQ15382 184 aa8.32□□□□□ -1.08
CTNND1-231ENST00000532463 RESP18Q5W5W9 173 aa8.32□□□□□ -1.08
CTNND1-231ENST00000532463 MTSS1LQ765P7 747 aa8.32□□□□□ -1.08
CTNND1-231ENST00000532463 CMTR2Q8IYT2 770 aaKnown RBP8.32□□□□□ -1.08
CTNND1-231ENST00000532463 SFRP1Q8N474 314 aa8.32□□□□□ -1.08
CTNND1-231ENST00000532463 TSPAN14Q8NG11 270 aa8.32□□□□□ -1.08
CTNND1-231ENST00000532463 FAR1Q8WVX9 515 aa8.32□□□□□ -1.08
CTNND1-231ENST00000532463 MUC3BQ9H195 1237 aa8.32□□□□□ -1.08
CTNND1-231ENST00000532463 FARSAQ9Y285 508 aaKnown RBP8.32□□□□□ -1.08
CTNND1-231ENST00000532463 TRIM64CA6NLI5 447 aa8.32□□□□□ -1.08
CTNND1-231ENST00000532463 USP27XA6NNY8 438 aa8.32□□□□□ -1.08
CTNND1-231ENST00000532463 TFECO14948 347 aaPredicted RBP8.32□□□□□ -1.08
CTNND1-231ENST00000532463 PLIN3O60664 434 aa8.32□□□□□ -1.08
CTNND1-231ENST00000532463 PDGFRAP16234 1089 aa8.32□□□□□ -1.08
CTNND1-231ENST00000532463 ME2P23368 584 aa8.32□□□□□ -1.08
CTNND1-231ENST00000532463 PSMC5P62195 406 aa8.32□□□□□ -1.08
CTNND1-231ENST00000532463 DEFA5Q01523 94 aa8.32□□□□□ -1.08
CTNND1-231ENST00000532463 MYBPC3Q14896 1274 aa8.32□□□□□ -1.08
CTNND1-231ENST00000532463 SYDE2Q5VT97 1194 aa8.32□□□□□ -1.08
CTNND1-231ENST00000532463 DEPDC4Q8N2C3 294 aa8.32□□□□□ -1.08
CTNND1-231ENST00000532463 TPD52L3Q96J77 140 aa8.32□□□□□ -1.08
CTNND1-231ENST00000532463 KCTD10Q9H3F6 313 aa8.32□□□□□ -1.08
CTNND1-231ENST00000532463 SH3GLB2Q9NR46 395 aa8.32□□□□□ -1.08
CTNND1-231ENST00000532463 ARHGAP31Q2M1Z3 1444 aa8.32□□□□□ -1.08
CTNND1-231ENST00000532463 LOC110117498-PIK3R3F6TDL0 507 aa8.32□□□□□ -1.08
CTNND1-231ENST00000532463 THEGLP0DJG4 465 aa8.32□□□□□ -1.08
CTNND1-231ENST00000532463 ERCC2P18074 760 aa8.32□□□□□ -1.08
CTNND1-231ENST00000532463 CNTFP26441 200 aa8.32□□□□□ -1.08
CTNND1-231ENST00000532463 FDFT1P37268 417 aa8.32□□□□□ -1.08
CTNND1-231ENST00000532463 ACADSBP45954 432 aa8.32□□□□□ -1.08
CTNND1-231ENST00000532463 RPP38P78345 283 aaKnown RBP8.32□□□□□ -1.08
CTNND1-231ENST00000532463 CBX3Q13185 183 aa8.32□□□□□ -1.08
CTNND1-231ENST00000532463 PLD1Q13393 1074 aa8.32□□□□□ -1.08
CTNND1-231ENST00000532463 HLA-DQA1Q5Y7H0 255 aa8.32□□□□□ -1.08
CTNND1-231ENST00000532463 AFTPHQ6ULP2 937 aa8.32□□□□□ -1.08
CTNND1-231ENST00000532463 ARMC8Q8IUR7 673 aa8.32□□□□□ -1.08
CTNND1-231ENST00000532463 HPS3Q969F9 1004 aa8.32□□□□□ -1.08
CTNND1-231ENST00000532463 EAF2Q96CJ1 260 aaPredicted RBP8.32□□□□□ -1.08
CTNND1-231ENST00000532463 TMEM237Q96Q45 408 aa8.32□□□□□ -1.08
CTNND1-231ENST00000532463 BTBD10Q9BSF8 475 aa8.32□□□□□ -1.08
CTNND1-231ENST00000532463 LYVE1Q9Y5Y7 322 aa8.32□□□□□ -1.08
CTNND1-231ENST00000532463 ABCA10Q8WWZ4 1543 aa8.32□□□□□ -1.08
CTNND1-231ENST00000532463 CHL1O00533 1208 aa8.32□□□□□ -1.08
CTNND1-231ENST00000532463 ATP5BP06576 529 aaKnown RBP8.32□□□□□ -1.08
CTNND1-231ENST00000532463 ERVK-10P10266 1014 aa8.32□□□□□ -1.08
CTNND1-231ENST00000532463 FAM160B2Q86V87 743 aa8.32□□□□□ -1.08
CTNND1-231ENST00000532463 SLC22A9Q8IVM8 553 aa8.32□□□□□ -1.08
CTNND1-231ENST00000532463 C10orf107Q8IVU9 208 aa8.32□□□□□ -1.08
CTNND1-231ENST00000532463 GPALPP1Q8IXQ4 340 aa8.32□□□□□ -1.08
CTNND1-231ENST00000532463 ITFG1Q8TB96 612 aa8.32□□□□□ -1.08
CTNND1-231ENST00000532463 CKAP2Q8WWK9 683 aa8.32□□□□□ -1.08
CTNND1-231ENST00000532463 ASB12Q8WXK4 309 aa8.32□□□□□ -1.08
CTNND1-231ENST00000532463 PRCCQ92733 491 aaPredicted RBP8.32□□□□□ -1.08
CTNND1-231ENST00000532463 APBB2Q92870 758 aa8.32□□□□□ -1.08
CTNND1-231ENST00000532463 USP7Q93009 1102 aa8.32□□□□□ -1.08
CTNND1-231ENST00000532463 ERMAPQ96PL5 475 aaPredicted RBP8.32□□□□□ -1.08
CTNND1-231ENST00000532463 LNPEPQ9UIQ6 1025 aa8.32□□□□□ -1.08
CTNND1-231ENST00000532463 NDUFAF1Q9Y375 327 aa8.32□□□□□ -1.08
CTNND1-231ENST00000532463 DHRS7Q9Y394 339 aa8.32□□□□□ -1.08
CTNND1-231ENST00000532463 PCDHB6Q9Y5E3 794 aa8.32□□□□□ -1.08
CTNND1-231ENST00000532463 AK5Q9Y6K8 562 aa8.32□□□□□ -1.08
CTNND1-231ENST00000532463 FLT4P35916 1363 aa8.31□□□□□ -1.08
CTNND1-231ENST00000532463 PPEF2O14830 753 aa8.31□□□□□ -1.08
CTNND1-231ENST00000532463 LARGE1O95461 756 aa8.31□□□□□ -1.08
CTNND1-231ENST00000532463 VCLP18206 1134 aa8.31□□□□□ -1.08
CTNND1-231ENST00000532463 GRK5P34947 590 aa8.31□□□□□ -1.08
CTNND1-231ENST00000532463 RPS8P62241 208 aaKnown RBP8.31□□□□□ -1.08
CTNND1-231ENST00000532463 SAMD4BQ5PRF9 694 aaKnown RBP8.31□□□□□ -1.08
CTNND1-231ENST00000532463 TDRD5Q8NAT2 981 aaKnown RBP8.31□□□□□ -1.08
CTNND1-231ENST00000532463 CCDC54Q8NEL0 328 aa8.31□□□□□ -1.08
CTNND1-231ENST00000532463 STK32AQ8WU08 396 aa8.31□□□□□ -1.08
CTNND1-231ENST00000532463 NMRK2Q9NPI5 230 aa8.31□□□□□ -1.08
CTNND1-231ENST00000532463 SNX7Q9UNH6 387 aa8.31□□□□□ -1.08
CTNND1-231ENST00000532463 C2orf81A6NN90 581 aa8.31□□□□□ -1.08
CTNND1-231ENST00000532463 MATN2O00339 956 aa8.31□□□□□ -1.08
CTNND1-231ENST00000532463 ASS1P00966 412 aaKnown RBP8.31□□□□□ -1.08
CTNND1-231ENST00000532463 STOMP27105 288 aa8.31□□□□□ -1.08
CTNND1-231ENST00000532463 CAV3P56539 151 aa8.31□□□□□ -1.08
CTNND1-231ENST00000532463 RIPK1Q13546 671 aa8.31□□□□□ -1.08
CTNND1-231ENST00000532463 SPIDRQ14159 915 aa8.31□□□□□ -1.08
CTNND1-231ENST00000532463 PTGES3Q15185 160 aaKnown RBP8.31□□□□□ -1.08
CTNND1-231ENST00000532463 DUOXA2Q1HG44 320 aa8.31□□□□□ -1.08
CTNND1-231ENST00000532463 C15orf59Q2T9L4 293 aaPredicted RBP8.31□□□□□ -1.08
CTNND1-231ENST00000532463 PLA2G4FQ68DD2 849 aa8.31□□□□□ -1.08
CTNND1-231ENST00000532463 FAM131AQ6UXB0 335 aa8.31□□□□□ -1.08
CTNND1-231ENST00000532463 KCTD1Q719H9 257 aa8.31□□□□□ -1.08
CTNND1-231ENST00000532463 CHERPQ8IWX8 916 aaKnown RBP8.31□□□□□ -1.08
CTNND1-231ENST00000532463 REXO1L1PQ8IX06 675 aa8.31□□□□□ -1.08
CTNND1-231ENST00000532463 SLC7A14Q8TBB6 771 aa8.31□□□□□ -1.08
CTNND1-231ENST00000532463 SLC38A2Q96QD8 506 aa8.31□□□□□ -1.08
CTNND1-231ENST00000532463 PFDN5Q99471 154 aa8.31□□□□□ -1.08
CTNND1-231ENST00000532463 HPF1Q9NWY4 346 aa8.31□□□□□ -1.08
CTNND1-231ENST00000532463 MED11Q9P086 117 aa8.31□□□□□ -1.08
CTNND1-231ENST00000532463 GATBO75879 557 aaKnown RBP8.31□□□□□ -1.08
CTNND1-231ENST00000532463 UBOX5O94941 541 aa8.31□□□□□ -1.08
CTNND1-231ENST00000532463 HIST1H2ABP04908 130 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms