RNA–Protein interactions for RNA: ENST00000531867.1

PUM1-222, Transcript of pumilio RNA binding family member 1, human

TSL 4

Gene PUM1, Length 549 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PUM1-222	ENST00000531867	KRTAP4-9	Q9BYQ8	210 aa		6.35	□□□□□ -1.39
PUM1-222	ENST00000531867	VAT1L	Q9HCJ6	419 aa		6.35	□□□□□ -1.39
PUM1-222	ENST00000531867	MTF2	Q9Y483	593 aa	Predicted RBP	6.35	□□□□□ -1.39
PUM1-222	ENST00000531867	COL4A3	Q01955	1670 aa		6.35	□□□□□ -1.39
PUM1-222	ENST00000531867	ZFYVE26	Q68DK2	2539 aa		6.35	□□□□□ -1.39
PUM1-222	ENST00000531867	CLUH	O75153	1309 aa		6.34	□□□□□ -1.39
PUM1-222	ENST00000531867	TTC41P	Q6P2S7	1318 aa		6.34	□□□□□ -1.39
PUM1-222	ENST00000531867	TCRBV16S1A1N1	A0A5B0	115 aa		6.34	□□□□□ -1.39
PUM1-222	ENST00000531867	TAF4	O00268	1085 aa		6.34	□□□□□ -1.39
PUM1-222	ENST00000531867	PRPF3	O43395	683 aa	Known RBP	6.34	□□□□□ -1.39
PUM1-222	ENST00000531867	SLC26A4	O43511	780 aa		6.34	□□□□□ -1.39
PUM1-222	ENST00000531867	CUTA	O60888	179 aa		6.34	□□□□□ -1.39
PUM1-222	ENST00000531867	C1R	P00736	705 aa		6.34	□□□□□ -1.39
PUM1-222	ENST00000531867	PARP1	P09874	1014 aa	Known RBP	6.34	□□□□□ -1.39
PUM1-222	ENST00000531867	POU3F2	P20265	443 aa	Predicted RBP	6.34	□□□□□ -1.39
PUM1-222	ENST00000531867	AOAH	P28039	575 aa		6.34	□□□□□ -1.39
PUM1-222	ENST00000531867	FLT3	P36888	993 aa		6.34	□□□□□ -1.39
PUM1-222	ENST00000531867	ALDH7A1	P49419	539 aa	Known RBP	6.34	□□□□□ -1.39
PUM1-222	ENST00000531867	NEK4	P51957	841 aa		6.34	□□□□□ -1.39
PUM1-222	ENST00000531867	TMPRSS15	P98073	1019 aa		6.34	□□□□□ -1.39
PUM1-222	ENST00000531867	SP4	Q02446	784 aa		6.34	□□□□□ -1.39
PUM1-222	ENST00000531867	TRAF1	Q13077	416 aa		6.34	□□□□□ -1.39
PUM1-222	ENST00000531867	PLCB4	Q15147	1175 aa		6.34	□□□□□ -1.39
PUM1-222	ENST00000531867	TSHZ3	Q63HK5	1081 aa		6.34	□□□□□ -1.39
PUM1-222	ENST00000531867	GLB1L	Q6UWU2	654 aa		6.34	□□□□□ -1.39
PUM1-222	ENST00000531867	ECHDC2	Q86YB7	292 aa		6.34	□□□□□ -1.39
PUM1-222	ENST00000531867	KBTBD2	Q8IY47	623 aa		6.34	□□□□□ -1.39
PUM1-222	ENST00000531867	DRC7	Q8IY82	874 aa		6.34	□□□□□ -1.39
PUM1-222	ENST00000531867	TTC9B	Q8N6N2	239 aa		6.34	□□□□□ -1.39
PUM1-222	ENST00000531867	NUDT10	Q8NFP7	164 aa		6.34	□□□□□ -1.39
PUM1-222	ENST00000531867	TRAPPC12	Q8WVT3	735 aa		6.34	□□□□□ -1.39
PUM1-222	ENST00000531867	AUTS2	Q8WXX7	1259 aa		6.34	□□□□□ -1.39
PUM1-222	ENST00000531867	RSPH1	Q8WYR4	309 aa		6.34	□□□□□ -1.39
PUM1-222	ENST00000531867	TNPO1	Q92973	898 aa	Known RBP	6.34	□□□□□ -1.39
PUM1-222	ENST00000531867	NUDT11	Q96G61	164 aa		6.34	□□□□□ -1.39
PUM1-222	ENST00000531867	IGSF21	Q96ID5	467 aa		6.34	□□□□□ -1.39
PUM1-222	ENST00000531867	CLUHP3	Q96NS8	147 aa		6.34	□□□□□ -1.39
PUM1-222	ENST00000531867	VN1R3	Q9BXE9	311 aa		6.34	□□□□□ -1.39
PUM1-222	ENST00000531867	RIOX1	Q9H6W3	641 aa		6.34	□□□□□ -1.39
PUM1-222	ENST00000531867	SLC39A2	Q9NP94	309 aa		6.34	□□□□□ -1.39
PUM1-222	ENST00000531867	TOMM22	Q9NS69	142 aa		6.34	□□□□□ -1.39
PUM1-222	ENST00000531867	SEMA4G	Q9NTN9	838 aa		6.34	□□□□□ -1.39
PUM1-222	ENST00000531867	COQ6	Q9Y2Z9	468 aa		6.34	□□□□□ -1.39
PUM1-222	ENST00000531867	GREB1	Q4ZG55	1949 aa		6.34	□□□□□ -1.39
PUM1-222	ENST00000531867	ANKRD11	Q6UB99	2663 aa	Predicted RBP	6.33	□□□□□ -1.4
PUM1-222	ENST00000531867	NEDD4	P46934	1319 aa		6.33	□□□□□ -1.4
PUM1-222	ENST00000531867	BAZ2B	Q9UIF8	2168 aa	Known RBP	6.33	□□□□□ -1.4
PUM1-222	ENST00000531867	SPEG	Q15772	3267 aa		6.33	□□□□□ -1.4
PUM1-222	ENST00000531867		A0A0U1RQF3	1178 aa		6.33	□□□□□ -1.4
PUM1-222	ENST00000531867	LOC107983988	A0A1B0GUW6	1196 aa	Predicted RBP	6.33	□□□□□ -1.4
PUM1-222	ENST00000531867	SLC12A8	A0AV02	714 aa		6.33	□□□□□ -1.4
PUM1-222	ENST00000531867	TMEM8B	A6NDV4	472 aa		6.33	□□□□□ -1.4
PUM1-222	ENST00000531867	SHISA7	A6NL88	538 aa		6.33	□□□□□ -1.4
PUM1-222	ENST00000531867	NT5C1B-RDH14	C9J2C7	533 aa		6.33	□□□□□ -1.4
PUM1-222	ENST00000531867	GABRD	O14764	452 aa		6.33	□□□□□ -1.4
PUM1-222	ENST00000531867	HIP1R	O75146	1068 aa		6.33	□□□□□ -1.4
PUM1-222	ENST00000531867	GPR32	O75388	356 aa		6.33	□□□□□ -1.4
PUM1-222	ENST00000531867	C4BPA	P04003	597 aa	Known RBP	6.33	□□□□□ -1.4
PUM1-222	ENST00000531867	CNP	P09543	421 aa	Known RBP	6.33	□□□□□ -1.4
PUM1-222	ENST00000531867	SDS	P20132	328 aa		6.33	□□□□□ -1.4
PUM1-222	ENST00000531867	KLRC1	P26715	233 aa		6.33	□□□□□ -1.4
PUM1-222	ENST00000531867	CRYBB1	P53674	252 aa	Predicted RBP	6.33	□□□□□ -1.4
PUM1-222	ENST00000531867	GPC5	P78333	572 aa		6.33	□□□□□ -1.4
PUM1-222	ENST00000531867	SAFB	Q15424	915 aa	Known RBP eCLIP	6.33	□□□□□ -1.4
PUM1-222	ENST00000531867	MLF2	Q15773	248 aa	Predicted RBP	6.33	□□□□□ -1.4
PUM1-222	ENST00000531867	PHF19	Q5T6S3	580 aa		6.33	□□□□□ -1.4
PUM1-222	ENST00000531867	UNQ6494/PRO21346	Q6UXR6	183 aa		6.33	□□□□□ -1.4
PUM1-222	ENST00000531867	MFSD6	Q6ZSS7	791 aa		6.33	□□□□□ -1.4
PUM1-222	ENST00000531867	ARHGEF18	Q6ZSZ5	1173 aa		6.33	□□□□□ -1.4
PUM1-222	ENST00000531867	TBC1D10C	Q8IV04	446 aa		6.33	□□□□□ -1.4
PUM1-222	ENST00000531867	NOSTRIN	Q8IVI9	506 aa		6.33	□□□□□ -1.4
PUM1-222	ENST00000531867	HDAC7	Q8WUI4	952 aa		6.33	□□□□□ -1.4
PUM1-222	ENST00000531867	ESR2	Q92731	530 aa		6.33	□□□□□ -1.4
PUM1-222	ENST00000531867	ZNF707	Q96C28	371 aa	Predicted RBP	6.33	□□□□□ -1.4
PUM1-222	ENST00000531867	AJUBA	Q96IF1	538 aa		6.33	□□□□□ -1.4
PUM1-222	ENST00000531867	CDHR1	Q96JP9	859 aa		6.33	□□□□□ -1.4
PUM1-222	ENST00000531867	NAP1L5	Q96NT1	182 aa	Predicted RBP	6.33	□□□□□ -1.4
PUM1-222	ENST00000531867	RBM15	Q96T37	977 aa	Known RBP eCLIP	6.33	□□□□□ -1.4	7e-9	■■□□□ 13
PUM1-222	ENST00000531867	TACO1	Q9BSH4	297 aa	Known RBP	6.33	□□□□□ -1.4
PUM1-222	ENST00000531867	RPP25	Q9BUL9	199 aa	Known RBP	6.33	□□□□□ -1.4
PUM1-222	ENST00000531867	SELENOO	Q9BVL4	669 aa		6.33	□□□□□ -1.4
PUM1-222	ENST00000531867	MRPL9	Q9BYD2	267 aa	Known RBP	6.33	□□□□□ -1.4
PUM1-222	ENST00000531867	IFT22	Q9H7X7	185 aa		6.33	□□□□□ -1.4
PUM1-222	ENST00000531867	KAT14	Q9H8E8	782 aa		6.33	□□□□□ -1.4
PUM1-222	ENST00000531867	TRIM39	Q9HCM9	518 aa		6.33	□□□□□ -1.4
PUM1-222	ENST00000531867	LTB4R2	Q9NPC1	389 aa		6.33	□□□□□ -1.4
PUM1-222	ENST00000531867	HELLS	Q9NRZ9	838 aa		6.33	□□□□□ -1.4
PUM1-222	ENST00000531867	KCNH7	Q9NS40	1196 aa		6.33	□□□□□ -1.4
PUM1-222	ENST00000531867	LUZP4	Q9P127	313 aa		6.33	□□□□□ -1.4
PUM1-222	ENST00000531867	STK39	Q9UEW8	545 aa		6.33	□□□□□ -1.4
PUM1-222	ENST00000531867	IP6K2	Q9UHH9	426 aa		6.33	□□□□□ -1.4
PUM1-222	ENST00000531867	MAD2L2	Q9UI95	211 aa		6.33	□□□□□ -1.4
PUM1-222	ENST00000531867	FBXO10	Q9UK96	956 aa		6.33	□□□□□ -1.4
PUM1-222	ENST00000531867	PNMA8B	Q9ULN7	279 aa	Predicted RBP	6.33	□□□□□ -1.4
PUM1-222	ENST00000531867	LUC7L2	Q9Y383	392 aa	Known RBP	6.33	□□□□□ -1.4
PUM1-222	ENST00000531867	ZFP37	Q9Y6Q3	630 aa	Predicted RBP	6.33	□□□□□ -1.4
PUM1-222	ENST00000531867	NUMBL	Q9Y6R0	609 aa		6.33	□□□□□ -1.4
PUM1-222	ENST00000531867	DOCK6	Q96HP0	2047 aa		6.33	□□□□□ -1.4
PUM1-222	ENST00000531867	IGKV6D-21	A0A0A0MT36	114 aa		6.32	□□□□□ -1.4
PUM1-222	ENST00000531867	CCDC195	A0A1B0GUA6	201 aa		6.32	□□□□□ -1.4

Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms