RNA–Protein interactions for RNA: ENST00000531857.1

PKP3-208, Transcript of plakophilin 3, humanhuman

TSL 4

Gene PKP3, Length 687 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-208ENST00000531857 CCNI2Q6ZMN8 369 aaPredicted RBP18.19■□□□□ 0.5
PKP3-208ENST00000531857 CCDC186Q7Z3E2 898 aa18.19■□□□□ 0.5
PKP3-208ENST00000531857 TMPRSS6Q8IU80 811 aa18.19■□□□□ 0.5
PKP3-208ENST00000531857 PIWIL1Q96J94 861 aaKnown RBP18.19■□□□□ 0.5
PKP3-208ENST00000531857 NT5C1AQ9BXI3 368 aa18.19■□□□□ 0.5
PKP3-208ENST00000531857 ZDHHC5Q9C0B5 715 aa18.19■□□□□ 0.5
PKP3-208ENST00000531857 PNPLA8Q9NP80 782 aa18.19■□□□□ 0.5
PKP3-208ENST00000531857 PCOLCE2Q9UKZ9 415 aa18.19■□□□□ 0.5
PKP3-208ENST00000531857 KNL1Q8NG31 2342 aa18.18■□□□□ 0.5
PKP3-208ENST00000531857 MUC22E2RYF6 1773 aaPredicted RBP18.18■□□□□ 0.5
PKP3-208ENST00000531857 IKBKBO14920 756 aa18.18■□□□□ 0.5
PKP3-208ENST00000531857 KIF20AO95235 890 aa18.18■□□□□ 0.5
PKP3-208ENST00000531857 CD58P19256 250 aa18.18■□□□□ 0.5
PKP3-208ENST00000531857 CORO1AP31146 461 aaKnown RBP18.18■□□□□ 0.5
PKP3-208ENST00000531857 KMT5BQ4FZB7 885 aa18.18■□□□□ 0.5
PKP3-208ENST00000531857 PPP1R26Q5T8A7 1209 aaPredicted RBP18.18■□□□□ 0.5
PKP3-208ENST00000531857 GLRX5Q86SX6 157 aa18.18■□□□□ 0.5
PKP3-208ENST00000531857 CACUL1Q86Y37 369 aa18.18■□□□□ 0.5
PKP3-208ENST00000531857 ZNF276Q8N554 614 aa18.18■□□□□ 0.5
PKP3-208ENST00000531857 RBBP8NLQ8NC74 664 aaPredicted RBP18.18■□□□□ 0.5
PKP3-208ENST00000531857 CADM4Q8NFZ8 388 aa18.18■□□□□ 0.5
PKP3-208ENST00000531857 SETD7Q8WTS6 366 aaKnown RBP18.18■□□□□ 0.5
PKP3-208ENST00000531857 SORCS1Q8WY21 1168 aa18.18■□□□□ 0.5
PKP3-208ENST00000531857 GAREM1Q9H706 876 aa18.18■□□□□ 0.5
PKP3-208ENST00000531857 FAM13BQ9NYF5 915 aa18.18■□□□□ 0.5
PKP3-208ENST00000531857 RASAL2Q9UJF2 1139 aa18.18■□□□□ 0.5
PKP3-208ENST00000531857 NFE2L3Q9Y4A8 694 aa18.18■□□□□ 0.5
PKP3-208ENST00000531857 USP3Q9Y6I4 520 aa18.18■□□□□ 0.5
PKP3-208ENST00000531857 IGSF10Q6WRI0 2623 aa18.18■□□□□ 0.5
PKP3-208ENST00000531857 METTL12A8MUP2 240 aa18.17■□□□□ 0.5
PKP3-208ENST00000531857 PDXKO00764 312 aa18.17■□□□□ 0.5
PKP3-208ENST00000531857 BCAT2O15382 392 aaPredicted RBP18.17■□□□□ 0.5
PKP3-208ENST00000531857 CILPO75339 1184 aa18.17■□□□□ 0.5
PKP3-208ENST00000531857 PRKCHP24723 683 aa18.17■□□□□ 0.5
PKP3-208ENST00000531857 ME1P48163 572 aa18.17■□□□□ 0.5
PKP3-208ENST00000531857 PSEN1P49768 467 aa18.17■□□□□ 0.5
PKP3-208ENST00000531857 COPAP53621 1224 aa18.17■□□□□ 0.5
PKP3-208ENST00000531857 EFEMP1Q12805 493 aa18.17■□□□□ 0.5
PKP3-208ENST00000531857 ZNF234Q14588 700 aa18.17■□□□□ 0.5
PKP3-208ENST00000531857 MDM1Q8TC05 714 aa18.17■□□□□ 0.5
PKP3-208ENST00000531857 TAS1R2Q8TE23 839 aa18.17■□□□□ 0.5
PKP3-208ENST00000531857 SIPA1Q96FS4 1042 aa18.17■□□□□ 0.5
PKP3-208ENST00000531857 PAGE5Q96GU1 130 aa18.17■□□□□ 0.5
PKP3-208ENST00000531857 DUSP16Q9BY84 665 aa18.17■□□□□ 0.5
PKP3-208ENST00000531857 EXOC1Q9NV70 894 aa18.17■□□□□ 0.5
PKP3-208ENST00000531857 CLIC5Q9NZA1 410 aa18.17■□□□□ 0.5
PKP3-208ENST00000531857 EIF2B4Q9UI10 523 aaKnown RBP18.17■□□□□ 0.5
PKP3-208ENST00000531857 AGO1Q9UL18 857 aaKnown RBP18.17■□□□□ 0.5
PKP3-208ENST00000531857 APOBEC2Q9Y235 224 aaKnown RBP18.17■□□□□ 0.5
PKP3-208ENST00000531857 FNDC3AQ9Y2H6 1198 aaKnown RBP18.17■□□□□ 0.5
PKP3-208ENST00000531857 ZNF510Q9Y2H8 683 aa18.17■□□□□ 0.5
PKP3-208ENST00000531857 SLCO1B1Q9Y6L6 691 aa18.17■□□□□ 0.5
PKP3-208ENST00000531857 CABIN1Q9Y6J0 2220 aa18.17■□□□□ 0.5
PKP3-208ENST00000531857 ACACAQ13085 2346 aa18.16■□□□□ 0.5
PKP3-208ENST00000531857 NPC1O15118 1278 aa18.16■□□□□ 0.5
PKP3-208ENST00000531857 ACTN4O43707 911 aaKnown RBP18.16■□□□□ 0.5
PKP3-208ENST00000531857 SYNCRIPO60506 623 aaKnown RBP18.16■□□□□ 0.5
PKP3-208ENST00000531857 IGLV3-19P01714 112 aa18.16■□□□□ 0.5
PKP3-208ENST00000531857 SLFN14P0C7P3 912 aa18.16■□□□□ 0.5
PKP3-208ENST00000531857 TRIM49P0CI25 452 aa18.16■□□□□ 0.5
PKP3-208ENST00000531857 TRIM49CP0CI26 452 aa18.16■□□□□ 0.5
PKP3-208ENST00000531857 ZSCAN22P10073 491 aaPredicted RBP18.16■□□□□ 0.5
PKP3-208ENST00000531857 RALAP11233 206 aa18.16■□□□□ 0.5
PKP3-208ENST00000531857 TRIM21P19474 475 aaKnown RBP18.16■□□□□ 0.5
PKP3-208ENST00000531857 CHKAP35790 457 aa18.16■□□□□ 0.5
PKP3-208ENST00000531857 GCLMP48507 274 aa18.16■□□□□ 0.5
PKP3-208ENST00000531857 VAMP7P51809 220 aa18.16■□□□□ 0.5
PKP3-208ENST00000531857 ZNF132P52740 706 aa18.16■□□□□ 0.5
PKP3-208ENST00000531857 COG7P83436 770 aa18.16■□□□□ 0.5
PKP3-208ENST00000531857 PPP3CAQ08209 521 aa18.16■□□□□ 0.5
PKP3-208ENST00000531857 HLA-BQ31612 363 aa18.16■□□□□ 0.5
PKP3-208ENST00000531857 TMEM215Q68D42 235 aa18.16■□□□□ 0.5
PKP3-208ENST00000531857 TADA2BQ86TJ2 420 aa18.16■□□□□ 0.5
PKP3-208ENST00000531857 DENND1CQ8IV53 801 aa18.16■□□□□ 0.5
PKP3-208ENST00000531857 CEP57L1Q8IYX8 460 aa18.16■□□□□ 0.5
PKP3-208ENST00000531857 C1orf216Q8TAB5 229 aa18.16■□□□□ 0.5
PKP3-208ENST00000531857 UCMAQ8WVF2 138 aa18.16■□□□□ 0.5
PKP3-208ENST00000531857 PRCCQ92733 491 aaPredicted RBP18.16■□□□□ 0.5
PKP3-208ENST00000531857 CCDC86Q9H6F5 360 aaKnown RBP18.16■□□□□ 0.5
PKP3-208ENST00000531857 CYP3A43Q9HB55 503 aa18.16■□□□□ 0.5
PKP3-208ENST00000531857 TM7SF3Q9NS93 570 aa18.16■□□□□ 0.5
PKP3-208ENST00000531857 ELOVL2Q9NXB9 296 aa18.16■□□□□ 0.5
PKP3-208ENST00000531857 TOR4AQ9NXH8 423 aa18.16■□□□□ 0.5
PKP3-208ENST00000531857 CELSR3Q9NYQ7 3312 aa18.15■□□□□ 0.5
PKP3-208ENST00000531857 APC2O95996 2303 aa18.15■□□□□ 0.5
PKP3-208ENST00000531857 LOC400499M0QZD8 3231 aa18.15■□□□□ 0.5
PKP3-208ENST00000531857 MBD3O95983 291 aa18.15■□□□□ 0.5
PKP3-208ENST00000531857 OXTRP30559 389 aa18.15■□□□□ 0.5
PKP3-208ENST00000531857 MATKP42679 507 aa18.15■□□□□ 0.5
PKP3-208ENST00000531857 KLHL40Q2TBA0 621 aa18.15■□□□□ 0.5
PKP3-208ENST00000531857 COL28A1Q2UY09 1125 aa18.15■□□□□ 0.5
PKP3-208ENST00000531857 ZNF394Q53GI3 561 aa18.15■□□□□ 0.5
PKP3-208ENST00000531857 ANKS1BQ7Z6G8 1248 aa18.15■□□□□ 0.5
PKP3-208ENST00000531857 FAM124AQ86V42 546 aa18.15■□□□□ 0.5
PKP3-208ENST00000531857 BAHD1Q8TBE0 780 aaPredicted RBP18.15■□□□□ 0.5
PKP3-208ENST00000531857 NUP58Q9BVL2 599 aa18.15■□□□□ 0.5
PKP3-208ENST00000531857 DCLK3Q9C098 648 aa18.15■□□□□ 0.5
PKP3-208ENST00000531857 CIPCQ9C0C6 399 aa18.15■□□□□ 0.5
PKP3-208ENST00000531857 NIF3L1Q9GZT8 377 aa18.15■□□□□ 0.5
PKP3-208ENST00000531857 FRMD4BQ9Y2L6 1034 aa18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms