RNA–Protein interactions for RNA: ENST00000531118.5

CD44-232, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 877 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-232ENST00000531118 COL27A1Q8IZC6 1860 aaPredicted RBP8.72□□□□□ -1.01
CD44-232ENST00000531118 BOD1L1Q8NFC6 3051 aa8.72□□□□□ -1.01
CD44-232ENST00000531118 C2CD3Q4AC94 2353 aa8.71□□□□□ -1.01
CD44-232ENST00000531118 NPHP3-ACAD11A0A0J9YXS1 232 aa8.71□□□□□ -1.02
CD44-232ENST00000531118 FAM187AA6NFU0 413 aa8.71□□□□□ -1.02
CD44-232ENST00000531118 ATP2C2O75185 946 aa8.71□□□□□ -1.02
CD44-232ENST00000531118 ACADMP11310 421 aa8.71□□□□□ -1.02
CD44-232ENST00000531118 EPHA8P29322 1005 aaPredicted RBP8.71□□□□□ -1.02
CD44-232ENST00000531118 CACNA2D1P54289 1103 aa8.71□□□□□ -1.02
CD44-232ENST00000531118 CYP27A1Q02318 531 aa8.71□□□□□ -1.02
CD44-232ENST00000531118 NFATC3Q12968 1075 aa8.71□□□□□ -1.02
CD44-232ENST00000531118 ENPP2Q13822 863 aa8.71□□□□□ -1.02
CD44-232ENST00000531118 KIAA1614Q5VZ46 1190 aa8.71□□□□□ -1.02
CD44-232ENST00000531118 ADALQ6DHV7 355 aa8.71□□□□□ -1.02
CD44-232ENST00000531118 ADAT2Q7Z6V5 191 aaKnown RBP8.71□□□□□ -1.02
CD44-232ENST00000531118 NT5DC4Q86YG4 428 aa8.71□□□□□ -1.02
CD44-232ENST00000531118 CACTIN-AS1Q8N1I8 211 aa8.71□□□□□ -1.02
CD44-232ENST00000531118 DCBLD1Q8N8Z6 715 aa8.71□□□□□ -1.02
CD44-232ENST00000531118 NSUN7Q8NE18 718 aaKnown RBP8.71□□□□□ -1.02
CD44-232ENST00000531118 PDZD8Q8NEN9 1154 aa8.71□□□□□ -1.02
CD44-232ENST00000531118 KBTBD7Q8WVZ9 684 aa8.71□□□□□ -1.02
CD44-232ENST00000531118 FBXO32Q969P5 355 aa8.71□□□□□ -1.02
CD44-232ENST00000531118 PCED1BQ96HM7 432 aa8.71□□□□□ -1.02
CD44-232ENST00000531118 C8orf48Q96LL4 319 aa8.71□□□□□ -1.02
CD44-232ENST00000531118 ZNF578Q96N58 590 aaPredicted RBP8.71□□□□□ -1.02
CD44-232ENST00000531118 MMTAG2Q9BU76 263 aaKnown RBP8.71□□□□□ -1.02
CD44-232ENST00000531118 NUP58Q9BVL2 599 aa8.71□□□□□ -1.02
CD44-232ENST00000531118 RAB34Q9BZG1 259 aa8.71□□□□□ -1.02
CD44-232ENST00000531118 CCSER2Q9H7U1 834 aa8.71□□□□□ -1.02
CD44-232ENST00000531118 TMEM30AQ9NV96 361 aa8.71□□□□□ -1.02
CD44-232ENST00000531118 GDAP2Q9NXN4 497 aa8.71□□□□□ -1.02
CD44-232ENST00000531118 KCND2Q9NZV8 630 aa8.71□□□□□ -1.02
CD44-232ENST00000531118 CDH9Q9ULB4 789 aa8.71□□□□□ -1.02
CD44-232ENST00000531118 AGAP1Q9UPQ3 857 aa8.71□□□□□ -1.02
CD44-232ENST00000531118 CLCA2Q9UQC9 943 aa8.71□□□□□ -1.02
CD44-232ENST00000531118 PCDHB1Q9Y5F3 818 aa8.71□□□□□ -1.02
CD44-232ENST00000531118 SNX9Q9Y5X1 595 aa8.71□□□□□ -1.02
CD44-232ENST00000531118 ICE1Q9Y2F5 2266 aa8.7□□□□□ -1.02
CD44-232ENST00000531118 ANKRD63C9JTQ0 380 aa8.7□□□□□ -1.02
CD44-232ENST00000531118 J3QL48 77 aa8.7□□□□□ -1.02
CD44-232ENST00000531118 DFNA5O60443 496 aa8.7□□□□□ -1.02
CD44-232ENST00000531118 JAK2O60674 1132 aa8.7□□□□□ -1.02
CD44-232ENST00000531118 IL18RAPO95256 599 aa8.7□□□□□ -1.02
CD44-232ENST00000531118 ITGAVP06756 1048 aa8.7□□□□□ -1.02
CD44-232ENST00000531118 CISD3P0C7P0 127 aa8.7□□□□□ -1.02
CD44-232ENST00000531118 GP1BBP13224 206 aa8.7□□□□□ -1.02
CD44-232ENST00000531118 PLCG1P19174 1290 aa8.7□□□□□ -1.02
CD44-232ENST00000531118 ABCB4P21439 1286 aa8.7□□□□□ -1.02
CD44-232ENST00000531118 SCP2P22307 547 aa8.7□□□□□ -1.02
CD44-232ENST00000531118 PRKCHP24723 683 aa8.7□□□□□ -1.02
CD44-232ENST00000531118 ACSL1P33121 698 aa8.7□□□□□ -1.02
CD44-232ENST00000531118 TUBP50607 506 aa8.7□□□□□ -1.02
CD44-232ENST00000531118 ZNF132P52740 706 aa8.7□□□□□ -1.02
CD44-232ENST00000531118 SLC12A3P55017 1021 aa8.7□□□□□ -1.02
CD44-232ENST00000531118 TFAMQ00059 246 aaKnown RBP8.7□□□□□ -1.02
CD44-232ENST00000531118 INSM1Q01101 510 aaPredicted RBP8.7□□□□□ -1.02
CD44-232ENST00000531118 ILKQ13418 452 aa8.7□□□□□ -1.02
CD44-232ENST00000531118 SHBQ15464 509 aa8.7□□□□□ -1.02
CD44-232ENST00000531118 MAPRE1Q15691 268 aaKnown RBP8.7□□□□□ -1.02
CD44-232ENST00000531118 KIF26BQ2KJY2 2108 aa8.7□□□□□ -1.02
CD44-232ENST00000531118 SOWAHAQ2M3V2 549 aa8.7□□□□□ -1.02
CD44-232ENST00000531118 MDH1BQ5I0G3 518 aa8.7□□□□□ -1.02
CD44-232ENST00000531118 HECTD3Q5T447 861 aa8.7□□□□□ -1.02
CD44-232ENST00000531118 TDRD10Q5VZ19 366 aaKnown RBP8.7□□□□□ -1.02
CD44-232ENST00000531118 SCARA3Q6AZY7 606 aa8.7□□□□□ -1.02
CD44-232ENST00000531118 CRELD2Q6UXH1 353 aaPredicted RBP8.7□□□□□ -1.02
CD44-232ENST00000531118 KDM7AQ6ZMT4 941 aa8.7□□□□□ -1.02
CD44-232ENST00000531118 ZNF574Q6ZN55 896 aaPredicted RBP8.7□□□□□ -1.02
CD44-232ENST00000531118 TPGS1Q6ZTW0 290 aa8.7□□□□□ -1.02
CD44-232ENST00000531118 BRSK2Q8IWQ3 736 aa8.7□□□□□ -1.02
CD44-232ENST00000531118 C4orf32Q8N8J7 132 aa8.7□□□□□ -1.02
CD44-232ENST00000531118 CXorf38Q8TB03 319 aa8.7□□□□□ -1.02
CD44-232ENST00000531118 SAP25Q8TEE9 199 aa8.7□□□□□ -1.02
CD44-232ENST00000531118 OVCA2Q8WZ82 227 aa8.7□□□□□ -1.02
CD44-232ENST00000531118 GTF3C6Q969F1 213 aa8.7□□□□□ -1.02
CD44-232ENST00000531118 BIRC7Q96CA5 298 aa8.7□□□□□ -1.02
CD44-232ENST00000531118 KCTD15Q96SI1 283 aaPredicted RBP8.7□□□□□ -1.02
CD44-232ENST00000531118 ELF4Q99607 663 aaPredicted RBP8.7□□□□□ -1.02
CD44-232ENST00000531118 REEP2Q9BRK0 252 aa8.7□□□□□ -1.02
CD44-232ENST00000531118 ORAI3Q9BRQ5 295 aa8.7□□□□□ -1.02
CD44-232ENST00000531118 LHX5Q9H2C1 402 aa8.7□□□□□ -1.02
CD44-232ENST00000531118 THAP10Q9P2Z0 257 aaPredicted RBP8.7□□□□□ -1.02
CD44-232ENST00000531118 AGO2Q9UKV8 859 aaKnown RBP8.7□□□□□ -1.02
CD44-232ENST00000531118 ITGA11Q9UKX5 1188 aa8.7□□□□□ -1.02
CD44-232ENST00000531118 ODF2LQ9ULJ1 636 aa8.7□□□□□ -1.02
CD44-232ENST00000531118 RELNP78509 3460 aa8.69□□□□□ -1.02
CD44-232ENST00000531118 ESPNB1AK53 854 aa8.69□□□□□ -1.02
CD44-232ENST00000531118 NPC1O15118 1278 aa8.69□□□□□ -1.02
CD44-232ENST00000531118 YKT6O15498 198 aa8.69□□□□□ -1.02
CD44-232ENST00000531118 KLK10O43240 276 aa8.69□□□□□ -1.02
CD44-232ENST00000531118 SYNCRIPO60506 623 aaKnown RBP8.69□□□□□ -1.02
CD44-232ENST00000531118 GREM1O60565 184 aa8.69□□□□□ -1.02
CD44-232ENST00000531118 REC8O95072 547 aa8.69□□□□□ -1.02
CD44-232ENST00000531118 FSBPO95073 299 aa8.69□□□□□ -1.02
CD44-232ENST00000531118 SEMA4FO95754 770 aa8.69□□□□□ -1.02
CD44-232ENST00000531118 CD27P26842 260 aa8.69□□□□□ -1.02
CD44-232ENST00000531118 CDH8P55286 799 aa8.69□□□□□ -1.02
CD44-232ENST00000531118 C21orf59P57076 290 aa8.69□□□□□ -1.02
CD44-232ENST00000531118 GABREP78334 506 aa8.69□□□□□ -1.02
CD44-232ENST00000531118 NFKB2Q00653 900 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms