RNA–Protein interactions for RNA: ENST00000531110.5

CD44-231, Transcript of CD44 molecule (Indian blood group), human

TSL 3

Gene CD44, Length 749 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CD44-231	ENST00000531110	SKAP2	O75563	359 aa	Predicted RBP	5.99	□□□□□ -1.45
CD44-231	ENST00000531110	FGFR1OP	O95684	399 aa	Known RBP	5.99	□□□□□ -1.45
CD44-231	ENST00000531110	GNAI2	P04899	355 aa		5.99	□□□□□ -1.45
CD44-231	ENST00000531110	BTF3	P20290	206 aa	Known RBP	5.99	□□□□□ -1.45
CD44-231	ENST00000531110	CAST	P20810	708 aa	Known RBP	5.99	□□□□□ -1.45
CD44-231	ENST00000531110	TGM1	P22735	817 aa		5.99	□□□□□ -1.45
CD44-231	ENST00000531110	ATP5D	P30049	168 aa		5.99	□□□□□ -1.45
CD44-231	ENST00000531110	TBX4	P57082	545 aa		5.99	□□□□□ -1.45
CD44-231	ENST00000531110	UBXN2A	P68543	259 aa		5.99	□□□□□ -1.45
CD44-231	ENST00000531110	HSD11B2	P80365	405 aa		5.99	□□□□□ -1.45
CD44-231	ENST00000531110	HSPA14	Q0VDF9	509 aa		5.99	□□□□□ -1.45
CD44-231	ENST00000531110	REST	Q13127	1097 aa		5.99	□□□□□ -1.45
CD44-231	ENST00000531110	TUBB2A	Q13885	445 aa		5.99	□□□□□ -1.45
CD44-231	ENST00000531110	SAFB	Q15424	915 aa	Known RBP eCLIP	5.99	□□□□□ -1.45
CD44-231	ENST00000531110	SNCB	Q16143	134 aa		5.99	□□□□□ -1.45
CD44-231	ENST00000531110	CYP2A13	Q16696	494 aa		5.99	□□□□□ -1.45
CD44-231	ENST00000531110	CCDC40	Q4G0X9	1142 aa		5.99	□□□□□ -1.45
CD44-231	ENST00000531110	VPS53	Q5VIR6	699 aa		5.99	□□□□□ -1.45
CD44-231	ENST00000531110	KAZN	Q674X7	775 aa		5.99	□□□□□ -1.45
CD44-231	ENST00000531110	IGFL4	Q6B9Z1	124 aa		5.99	□□□□□ -1.45
CD44-231	ENST00000531110	OVCH2	Q7RTZ1	564 aa		5.99	□□□□□ -1.45
CD44-231	ENST00000531110	TMPRSS9	Q7Z410	1059 aa		5.99	□□□□□ -1.45
CD44-231	ENST00000531110	CLNK	Q7Z7G1	428 aa		5.99	□□□□□ -1.45
CD44-231	ENST00000531110	PPP1R3B	Q86XI6	285 aa		5.99	□□□□□ -1.45
CD44-231	ENST00000531110	SLC15A3	Q8IY34	581 aa		5.99	□□□□□ -1.45
CD44-231	ENST00000531110	KIAA0319L	Q8IZA0	1049 aa		5.99	□□□□□ -1.45
CD44-231	ENST00000531110	CFAP52	Q8N1V2	620 aa		5.99	□□□□□ -1.45
CD44-231	ENST00000531110	ZBTB34	Q8NCN2	500 aa		5.99	□□□□□ -1.45
CD44-231	ENST00000531110	APPL2	Q8NEU8	664 aa		5.99	□□□□□ -1.45
CD44-231	ENST00000531110	LILRB1	Q8NHL6	650 aa	Predicted RBP	5.99	□□□□□ -1.45
CD44-231	ENST00000531110	ZNF75CP	Q92670	426 aa	Predicted RBP	5.99	□□□□□ -1.45
CD44-231	ENST00000531110	ERP27	Q96DN0	273 aa		5.99	□□□□□ -1.45
CD44-231	ENST00000531110	RPGRIP1	Q96KN7	1286 aa		5.99	□□□□□ -1.45
CD44-231	ENST00000531110	COQ10A	Q96MF6	247 aa		5.99	□□□□□ -1.45
CD44-231	ENST00000531110	UROC1	Q96N76	676 aa		5.99	□□□□□ -1.45
CD44-231	ENST00000531110	ZSWIM1	Q9BR11	485 aa		5.99	□□□□□ -1.45
CD44-231	ENST00000531110	CNPPD1	Q9BV87	410 aa		5.99	□□□□□ -1.45
CD44-231	ENST00000531110	TUBB2B	Q9BVA1	445 aa		5.99	□□□□□ -1.45
CD44-231	ENST00000531110	C1orf43	Q9BWL3	253 aa		5.99	□□□□□ -1.45
CD44-231	ENST00000531110	FUT8	Q9BYC5	575 aa		5.99	□□□□□ -1.45
CD44-231	ENST00000531110	ALOXE3	Q9BYJ1	711 aa		5.99	□□□□□ -1.45
CD44-231	ENST00000531110	FAM204A	Q9H8W3	233 aa		5.99	□□□□□ -1.45
CD44-231	ENST00000531110	ST6GALNAC1	Q9NSC7	600 aa	Predicted RBP	5.99	□□□□□ -1.45
CD44-231	ENST00000531110	POLG2	Q9UHN1	485 aa		5.99	□□□□□ -1.45
CD44-231	ENST00000531110	HOOK1	Q9UJC3	728 aa	Known RBP	5.99	□□□□□ -1.45
CD44-231	ENST00000531110	MTUS1	Q9ULD2	1270 aa		5.99	□□□□□ -1.45
CD44-231	ENST00000531110	ASB3	Q9Y575	518 aa		5.99	□□□□□ -1.45
CD44-231	ENST00000531110	TTC41P	Q6P2S7	1318 aa		5.99	□□□□□ -1.45
CD44-231	ENST00000531110	SAMD9	Q5K651	1589 aa		5.98	□□□□□ -1.45
CD44-231	ENST00000531110	PRAMEF33	A0A0G2JMD5	474 aa		5.98	□□□□□ -1.45
CD44-231	ENST00000531110	CCDC195	A0A1B0GUA6	201 aa		5.98	□□□□□ -1.45
CD44-231	ENST00000531110		A0A1W2PRQ8	180 aa		5.98	□□□□□ -1.45
CD44-231	ENST00000531110	FAM170A	A1A519	330 aa		5.98	□□□□□ -1.45
CD44-231	ENST00000531110	TMEM191C	A6NGB0	347 aa		5.98	□□□□□ -1.45
CD44-231	ENST00000531110	BTBD19	C9JJ37	291 aa		5.98	□□□□□ -1.45
CD44-231	ENST00000531110	FRS3	O43559	492 aa		5.98	□□□□□ -1.45
CD44-231	ENST00000531110	SNX2	O60749	519 aa		5.98	□□□□□ -1.45
CD44-231	ENST00000531110	PRAMEF10	O60809	474 aa		5.98	□□□□□ -1.45
CD44-231	ENST00000531110	ADCY5	O95622	1261 aa		5.98	□□□□□ -1.45
CD44-231	ENST00000531110	GSTA2	P09210	222 aa		5.98	□□□□□ -1.45
CD44-231	ENST00000531110	RPS2	P15880	293 aa	Known RBP	5.98	□□□□□ -1.45
CD44-231	ENST00000531110	HSPA1L	P34931	641 aa		5.98	□□□□□ -1.45
CD44-231	ENST00000531110	HOXD12	P35452	270 aa		5.98	□□□□□ -1.45
CD44-231	ENST00000531110	VAV2	P52735	878 aa		5.98	□□□□□ -1.45
CD44-231	ENST00000531110	MRPS35	P82673	323 aa	Known RBP	5.98	□□□□□ -1.45
CD44-231	ENST00000531110	PURA	Q00577	322 aa	Known RBP	5.98	□□□□□ -1.45
CD44-231	ENST00000531110	ITIH3	Q06033	890 aa		5.98	□□□□□ -1.45
CD44-231	ENST00000531110	CBX3	Q13185	183 aa		5.98	□□□□□ -1.45
CD44-231	ENST00000531110	HABP2	Q14520	560 aa	Predicted RBP	5.98	□□□□□ -1.45
CD44-231	ENST00000531110	NAA25	Q14CX7	972 aa		5.98	□□□□□ -1.45
CD44-231	ENST00000531110	PTPN14	Q15678	1187 aa		5.98	□□□□□ -1.45
CD44-231	ENST00000531110	WHAMMP3	Q1A5X7	153 aa		5.98	□□□□□ -1.45
CD44-231	ENST00000531110	RABL6	Q3YEC7	729 aa	Predicted RBP	5.98	□□□□□ -1.45
CD44-231	ENST00000531110	SMUG1	Q53HV7	270 aa		5.98	□□□□□ -1.45
CD44-231	ENST00000531110	BEND6	Q5SZJ8	279 aa	Predicted RBP	5.98	□□□□□ -1.45
CD44-231	ENST00000531110	CCSAP	Q6IQ19	270 aa	Predicted RBP	5.98	□□□□□ -1.45
CD44-231	ENST00000531110	IRGC	Q6NXR0	463 aa		5.98	□□□□□ -1.45
CD44-231	ENST00000531110	CHST15	Q7LFX5	561 aa	Predicted RBP	5.98	□□□□□ -1.45
CD44-231	ENST00000531110	PPP1R32	Q7Z5V6	425 aa		5.98	□□□□□ -1.45
CD44-231	ENST00000531110	FAM186B	Q8IYM0	893 aa		5.98	□□□□□ -1.45
CD44-231	ENST00000531110	LINC00469	Q8N7U9	141 aa		5.98	□□□□□ -1.45
CD44-231	ENST00000531110	ARL10	Q8N8L6	244 aa		5.98	□□□□□ -1.45
CD44-231	ENST00000531110	PDPR	Q8NCN5	879 aa		5.98	□□□□□ -1.45
CD44-231	ENST00000531110	PLBD2	Q8NHP8	589 aa		5.98	□□□□□ -1.45
CD44-231	ENST00000531110	TTC8	Q8TAM2	541 aa		5.98	□□□□□ -1.45
CD44-231	ENST00000531110	COG3	Q96JB2	828 aa		5.98	□□□□□ -1.45
CD44-231	ENST00000531110	CCT7	Q99832	543 aa		5.98	□□□□□ -1.45
CD44-231	ENST00000531110	MLST8	Q9BVC4	326 aa		5.98	□□□□□ -1.45
CD44-231	ENST00000531110	HERC2P3	Q9BVR0	1158 aa		5.98	□□□□□ -1.45
CD44-231	ENST00000531110	TLR10	Q9BXR5	811 aa		5.98	□□□□□ -1.45
CD44-231	ENST00000531110	AGXT2	Q9BYV1	514 aa		5.98	□□□□□ -1.45
CD44-231	ENST00000531110	FAM192A	Q9GZU8	254 aa		5.98	□□□□□ -1.45
CD44-231	ENST00000531110	SERHL2	Q9H4I8	314 aa		5.98	□□□□□ -1.45
CD44-231	ENST00000531110	CNNM1	Q9NRU3	951 aa		5.98	□□□□□ -1.45
CD44-231	ENST00000531110	CTTNBP2NL	Q9P2B4	639 aa		5.98	□□□□□ -1.45
CD44-231	ENST00000531110	WDR35	Q9P2L0	1181 aa		5.98	□□□□□ -1.45
CD44-231	ENST00000531110	ORC3	Q9UBD5	711 aa	Predicted RBP	5.98	□□□□□ -1.45
CD44-231	ENST00000531110	TPCN1	Q9ULQ1	816 aa		5.98	□□□□□ -1.45
CD44-231	ENST00000531110	SLC45A2	Q9UMX9	530 aa		5.98	□□□□□ -1.45
CD44-231	ENST00000531110	MED16	Q9Y2X0	877 aa		5.98	□□□□□ -1.45

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