RNA–Protein interactions for RNA: ENST00000529608.1

TGFBR3-208, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 5

Gene TGFBR3, Length 785 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-208ENST00000529608 TNNC2P02585 160 aa9.02□□□□□ -0.97
TGFBR3-208ENST00000529608 ZDHHC11BP0C7U3 371 aa9.02□□□□□ -0.97
TGFBR3-208ENST00000529608 CDK11BP21127 795 aaKnown RBP9.02□□□□□ -0.97
TGFBR3-208ENST00000529608 YWHAQP27348 245 aa9.02□□□□□ -0.97
TGFBR3-208ENST00000529608 STAT6P42226 847 aa9.02□□□□□ -0.97
TGFBR3-208ENST00000529608 AFMP43652 599 aa9.02□□□□□ -0.97
TGFBR3-208ENST00000529608 PPP3CCP48454 512 aa9.02□□□□□ -0.97
TGFBR3-208ENST00000529608 MYL6P60660 151 aa9.02□□□□□ -0.97
TGFBR3-208ENST00000529608 GFPT1Q06210 699 aaPredicted RBP9.02□□□□□ -0.97
TGFBR3-208ENST00000529608 SCAPQ12770 1279 aa9.02□□□□□ -0.97
TGFBR3-208ENST00000529608 MAPRE1Q15691 268 aaKnown RBP9.02□□□□□ -0.97
TGFBR3-208ENST00000529608 DUOXA2Q1HG44 320 aa9.02□□□□□ -0.97
TGFBR3-208ENST00000529608 ANO4Q32M45 955 aa9.02□□□□□ -0.97
TGFBR3-208ENST00000529608 WDR72Q3MJ13 1102 aa9.02□□□□□ -0.97
TGFBR3-208ENST00000529608 DNTTIP2Q5QJE6 756 aaKnown RBP9.02□□□□□ -0.97
TGFBR3-208ENST00000529608 SNX30Q5VWJ9 437 aa9.02□□□□□ -0.97
TGFBR3-208ENST00000529608 SLCO6A1Q86UG4 719 aa9.02□□□□□ -0.97
TGFBR3-208ENST00000529608 MARCH9Q86YJ5 346 aa9.02□□□□□ -0.97
TGFBR3-208ENST00000529608 B3GALNT2Q8NCR0 500 aa9.02□□□□□ -0.97
TGFBR3-208ENST00000529608 PRR7Q8TB68 274 aa9.02□□□□□ -0.97
TGFBR3-208ENST00000529608 IPO4Q8TEX9 1081 aaKnown RBP9.02□□□□□ -0.97
TGFBR3-208ENST00000529608 FBXO32Q969P5 355 aa9.02□□□□□ -0.97
TGFBR3-208ENST00000529608 HSPA12BQ96MM6 686 aa9.02□□□□□ -0.97
TGFBR3-208ENST00000529608 BBC3Q96PG8 261 aaPredicted RBP9.02□□□□□ -0.97
TGFBR3-208ENST00000529608 SLITRK1Q96PX8 696 aa9.02□□□□□ -0.97
TGFBR3-208ENST00000529608 ELOVL4Q9GZR5 314 aa9.02□□□□□ -0.97
TGFBR3-208ENST00000529608 SNX25Q9H3E2 840 aa9.02□□□□□ -0.97
TGFBR3-208ENST00000529608 SMYD3Q9H7B4 428 aa9.02□□□□□ -0.97
TGFBR3-208ENST00000529608 IL21RQ9HBE5 538 aa9.02□□□□□ -0.97
TGFBR3-208ENST00000529608 KCND1Q9NSA2 647 aa9.02□□□□□ -0.97
TGFBR3-208ENST00000529608 FANCLQ9NW38 375 aa9.02□□□□□ -0.97
TGFBR3-208ENST00000529608 OSER1Q9NX31 292 aa9.02□□□□□ -0.97
TGFBR3-208ENST00000529608 GMIPQ9P107 970 aa9.02□□□□□ -0.97
TGFBR3-208ENST00000529608 TBC1D14Q9P2M4 693 aa9.02□□□□□ -0.97
TGFBR3-208ENST00000529608 DEC1Q9P2X7 70 aa9.02□□□□□ -0.97
TGFBR3-208ENST00000529608 PYCARDQ9ULZ3 195 aa9.02□□□□□ -0.97
TGFBR3-208ENST00000529608 STARD13Q9Y3M8 1113 aa9.02□□□□□ -0.97
TGFBR3-208ENST00000529608 TP53BP1Q12888 1972 aaPredicted RBP9.01□□□□□ -0.97
TGFBR3-208ENST00000529608 FAM92AA1XBS5 289 aa9.01□□□□□ -0.97
TGFBR3-208ENST00000529608 A8MXQ7 604 aa9.01□□□□□ -0.97
TGFBR3-208ENST00000529608 PALM2-AKAP2B1ALY0 433 aaPredicted RBP9.01□□□□□ -0.97
TGFBR3-208ENST00000529608 FTH1P19P0C7X4 201 aa9.01□□□□□ -0.97
TGFBR3-208ENST00000529608 DLATP10515 647 aaKnown RBP9.01□□□□□ -0.97
TGFBR3-208ENST00000529608 ZNF18P17022 549 aa9.01□□□□□ -0.97
TGFBR3-208ENST00000529608 NTSR1P30989 418 aa9.01□□□□□ -0.97
TGFBR3-208ENST00000529608 HOXD12P35452 270 aa9.01□□□□□ -0.97
TGFBR3-208ENST00000529608 PPP1R2P41236 205 aa9.01□□□□□ -0.97
TGFBR3-208ENST00000529608 CASP4P49662 377 aa9.01□□□□□ -0.97
TGFBR3-208ENST00000529608 SLC5A3P53794 718 aa9.01□□□□□ -0.97
TGFBR3-208ENST00000529608 ATXN3P54252 364 aaPredicted RBP9.01□□□□□ -0.97
TGFBR3-208ENST00000529608 AMPD3Q01432 767 aa9.01□□□□□ -0.97
TGFBR3-208ENST00000529608 BNC1Q01954 994 aa9.01□□□□□ -0.97
TGFBR3-208ENST00000529608 ORC1Q13415 861 aa9.01□□□□□ -0.97
TGFBR3-208ENST00000529608 ALCAMQ13740 583 aa9.01□□□□□ -0.97
TGFBR3-208ENST00000529608 TRIP6Q15654 476 aaKnown RBP9.01□□□□□ -0.97
TGFBR3-208ENST00000529608 SNRNP35Q16560 246 aaKnown RBP9.01□□□□□ -0.97
TGFBR3-208ENST00000529608 COL28A1Q2UY09 1125 aa9.01□□□□□ -0.97
TGFBR3-208ENST00000529608 HECTD3Q5T447 861 aa9.01□□□□□ -0.97
TGFBR3-208ENST00000529608 EPM2AIP1Q7L775 607 aaPredicted RBP9.01□□□□□ -0.97
TGFBR3-208ENST00000529608 GPRIN1Q7Z2K8 1008 aa9.01□□□□□ -0.97
TGFBR3-208ENST00000529608 TMC6Q7Z403 805 aa9.01□□□□□ -0.97
TGFBR3-208ENST00000529608 FAM35AQ86V20 835 aa9.01□□□□□ -0.97
TGFBR3-208ENST00000529608 GRAMD1CQ8IYS0 662 aa9.01□□□□□ -0.97
TGFBR3-208ENST00000529608 FUKQ8N0W3 1084 aa9.01□□□□□ -0.97
TGFBR3-208ENST00000529608 HDDC3Q8N4P3 179 aa9.01□□□□□ -0.97
TGFBR3-208ENST00000529608 CEP76Q8TAP6 659 aa9.01□□□□□ -0.97
TGFBR3-208ENST00000529608 MDM1Q8TC05 714 aa9.01□□□□□ -0.97
TGFBR3-208ENST00000529608 ADAMTS14Q8WXS8 1223 aa9.01□□□□□ -0.97
TGFBR3-208ENST00000529608 CCDC47Q96A33 483 aaKnown RBP9.01□□□□□ -0.97
TGFBR3-208ENST00000529608 CCDC127Q96BQ5 260 aa9.01□□□□□ -0.97
TGFBR3-208ENST00000529608 ZNF419Q96HQ0 510 aaPredicted RBP9.01□□□□□ -0.97
TGFBR3-208ENST00000529608 MRGPRX1Q96LB2 322 aa9.01□□□□□ -0.97
TGFBR3-208ENST00000529608 CGRRF1Q99675 332 aa9.01□□□□□ -0.97
TGFBR3-208ENST00000529608 SMOQ99835 787 aa9.01□□□□□ -0.97
TGFBR3-208ENST00000529608 GABRG3Q99928 467 aa9.01□□□□□ -0.97
TGFBR3-208ENST00000529608 HSD3B7Q9H2F3 369 aa9.01□□□□□ -0.97
TGFBR3-208ENST00000529608 CACNA2D2Q9NY47 1150 aa9.01□□□□□ -0.97
TGFBR3-208ENST00000529608 NXF1Q9UBU9 619 aaKnown RBP9.01□□□□□ -0.97
TGFBR3-208ENST00000529608 SH3BP1Q9Y3L3 701 aa9.01□□□□□ -0.97
TGFBR3-208ENST00000529608 R3HCC1Q9Y3T6 440 aaKnown RBP9.01□□□□□ -0.97
TGFBR3-208ENST00000529608 NFE2L3Q9Y4A8 694 aa9.01□□□□□ -0.97
TGFBR3-208ENST00000529608 SLCO1B1Q9Y6L6 691 aa9.01□□□□□ -0.97
TGFBR3-208ENST00000529608 MUC22E2RYF6 1773 aaPredicted RBP9□□□□□ -0.97
TGFBR3-208ENST00000529608 KCNJ18B7U540 433 aa9□□□□□ -0.97
TGFBR3-208ENST00000529608 NEDD8-MDP1E9PL57 170 aa9□□□□□ -0.97
TGFBR3-208ENST00000529608 H0Y626 953 aa9□□□□□ -0.97
TGFBR3-208ENST00000529608 MDM4O15151 490 aa9□□□□□ -0.97
TGFBR3-208ENST00000529608 CBFA2T3O75081 653 aa9□□□□□ -0.97
TGFBR3-208ENST00000529608 TRIM16O95361 564 aa9□□□□□ -0.97
TGFBR3-208ENST00000529608 TUBB4AP04350 444 aa9□□□□□ -0.97
TGFBR3-208ENST00000529608 CISD3P0C7P0 127 aa9□□□□□ -0.97
TGFBR3-208ENST00000529608 SKILP12757 684 aa9□□□□□ -0.97
TGFBR3-208ENST00000529608 CCDC130P13994 396 aa9□□□□□ -0.97
TGFBR3-208ENST00000529608 TYRP14679 529 aa9□□□□□ -0.97
TGFBR3-208ENST00000529608 TNNI1P19237 187 aa9□□□□□ -0.97
TGFBR3-208ENST00000529608 CASP1P29466 404 aa9□□□□□ -0.97
TGFBR3-208ENST00000529608 CYP24A1Q07973 514 aa9□□□□□ -0.97
TGFBR3-208ENST00000529608 GRIK2Q13002 908 aa9□□□□□ -0.97
TGFBR3-208ENST00000529608 CUL4BQ13620 913 aa9□□□□□ -0.97
TGFBR3-208ENST00000529608 BYSLQ13895 437 aaKnown RBP9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 86.8 ms