RNA–Protein interactions for RNA: ENST00000529526.5

CTNND1-220, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 6,099 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-220ENST00000529526 MGAT4DA6NG13 374 aa8.34□□□□□ -1.07
CTNND1-220ENST00000529526 DCDC2CA8MYV0 355 aa8.34□□□□□ -1.07
CTNND1-220ENST00000529526 TM9SF1O15321 606 aa8.34□□□□□ -1.07
CTNND1-220ENST00000529526 DDNO94850 711 aaPredicted RBP8.34□□□□□ -1.07
CTNND1-220ENST00000529526 SLC2A4P14672 509 aa8.34□□□□□ -1.07
CTNND1-220ENST00000529526 PSMC3P17980 439 aa8.34□□□□□ -1.07
CTNND1-220ENST00000529526 ALDH5A1P51649 535 aaPredicted RBP8.34□□□□□ -1.07
CTNND1-220ENST00000529526 DLG4P78352 724 aa8.34□□□□□ -1.07
CTNND1-220ENST00000529526 MRPS35P82673 323 aaKnown RBP8.34□□□□□ -1.07
CTNND1-220ENST00000529526 C1QBPQ07021 282 aaKnown RBP8.34□□□□□ -1.07
CTNND1-220ENST00000529526 TRAF2Q12933 501 aa8.34□□□□□ -1.07
CTNND1-220ENST00000529526 TRIP4Q15650 581 aaPredicted RBP8.34□□□□□ -1.07
CTNND1-220ENST00000529526 CBWD6Q4V339 395 aa8.34□□□□□ -1.07
CTNND1-220ENST00000529526 CBWD3Q5JTY5 395 aa8.34□□□□□ -1.07
CTNND1-220ENST00000529526 TCHHL1Q5QJ38 904 aaPredicted RBP8.34□□□□□ -1.07
CTNND1-220ENST00000529526 CBWD5Q5RIA9 395 aa8.34□□□□□ -1.07
CTNND1-220ENST00000529526 GPR141Q7Z602 305 aa8.34□□□□□ -1.07
CTNND1-220ENST00000529526 GLMNQ92990 594 aa8.34□□□□□ -1.07
CTNND1-220ENST00000529526 CAVIN3Q969G5 261 aa8.34□□□□□ -1.07
CTNND1-220ENST00000529526 DUSP9Q99956 384 aaKnown RBP8.34□□□□□ -1.07
CTNND1-220ENST00000529526 ADGRE3Q9BY15 652 aa8.34□□□□□ -1.07
CTNND1-220ENST00000529526 TMEM245Q9H330 911 aa8.34□□□□□ -1.07
CTNND1-220ENST00000529526 TBC1D13Q9NVG8 400 aa8.34□□□□□ -1.07
CTNND1-220ENST00000529526 CTNNAL1Q9UBT7 734 aa8.34□□□□□ -1.07
CTNND1-220ENST00000529526 NWD1Q149M9 1564 aa8.34□□□□□ -1.07
CTNND1-220ENST00000529526 GAKO14976 1311 aa8.34□□□□□ -1.07
CTNND1-220ENST00000529526 SAC3D1A6NKF1 404 aa8.34□□□□□ -1.07
CTNND1-220ENST00000529526 ADM5C9JUS6 153 aa8.34□□□□□ -1.07
CTNND1-220ENST00000529526 SERPINI2O75830 405 aa8.34□□□□□ -1.07
CTNND1-220ENST00000529526 RARAP10276 462 aa8.34□□□□□ -1.07
CTNND1-220ENST00000529526 ACADSP16219 412 aa8.34□□□□□ -1.07
CTNND1-220ENST00000529526 MGAT5Q09328 741 aa8.34□□□□□ -1.07
CTNND1-220ENST00000529526 OVOS1Q6IE37 1185 aa8.34□□□□□ -1.07
CTNND1-220ENST00000529526 C16orf59Q7L2K0 433 aa8.34□□□□□ -1.07
CTNND1-220ENST00000529526 KCNMB4Q86W47 210 aa8.34□□□□□ -1.07
CTNND1-220ENST00000529526 DEFB107AQ8IZN7 70 aa8.34□□□□□ -1.07
CTNND1-220ENST00000529526 C3orf20Q8ND61 904 aa8.34□□□□□ -1.07
CTNND1-220ENST00000529526 USP6NLQ92738 828 aa8.34□□□□□ -1.07
CTNND1-220ENST00000529526 GFM2Q969S9 779 aaKnown RBP8.34□□□□□ -1.07
CTNND1-220ENST00000529526 MAGEB10Q96LZ2 347 aaPredicted RBP8.34□□□□□ -1.07
CTNND1-220ENST00000529526 TMEM237Q96Q45 408 aa8.34□□□□□ -1.07
CTNND1-220ENST00000529526 PCDH9Q9HC56 1237 aa8.34□□□□□ -1.07
CTNND1-220ENST00000529526 RGS5O15539 181 aa8.33□□□□□ -1.08
CTNND1-220ENST00000529526 DLGAP3O95886 979 aa8.33□□□□□ -1.08
CTNND1-220ENST00000529526 MPOP05164 745 aa8.33□□□□□ -1.08
CTNND1-220ENST00000529526 RBP1P09455 135 aa8.33□□□□□ -1.08
CTNND1-220ENST00000529526 DARSP14868 501 aaKnown RBP8.33□□□□□ -1.08
CTNND1-220ENST00000529526 CNTFP26441 200 aa8.33□□□□□ -1.08
CTNND1-220ENST00000529526 MAPK1P28482 360 aa8.33□□□□□ -1.08
CTNND1-220ENST00000529526 TUBP50607 506 aa8.33□□□□□ -1.08
CTNND1-220ENST00000529526 CNTN2Q02246 1040 aa8.33□□□□□ -1.08
CTNND1-220ENST00000529526 CSTF3Q12996 717 aaKnown RBP8.33□□□□□ -1.08
CTNND1-220ENST00000529526 MFSD10Q14728 455 aa8.33□□□□□ -1.08
CTNND1-220ENST00000529526 FAM180AQ6UWF9 173 aa8.33□□□□□ -1.08
CTNND1-220ENST00000529526 RIPOR1Q6ZS17 1223 aa8.33□□□□□ -1.08
CTNND1-220ENST00000529526 CASP10Q92851 521 aa8.33□□□□□ -1.08
CTNND1-220ENST00000529526 GBA2Q9HCG7 927 aaPredicted RBP8.33□□□□□ -1.08
CTNND1-220ENST00000529526 SMPD4Q9NXE4 827 aa8.33□□□□□ -1.08
CTNND1-220ENST00000529526 DDX20Q9UHI6 824 aaKnown RBP8.33□□□□□ -1.08
CTNND1-220ENST00000529526 SOX13Q9UN79 622 aa8.33□□□□□ -1.08
CTNND1-220ENST00000529526 FRMPD1Q5SYB0 1578 aa8.33□□□□□ -1.08
CTNND1-220ENST00000529526 GHRP10912 638 aa8.33□□□□□ -1.08
CTNND1-220ENST00000529526 RRM2P31350 389 aa8.33□□□□□ -1.08
CTNND1-220ENST00000529526 CCR1P32246 355 aa8.33□□□□□ -1.08
CTNND1-220ENST00000529526 TBX4P57082 545 aa8.33□□□□□ -1.08
CTNND1-220ENST00000529526 IFI35P80217 286 aaPredicted RBP8.33□□□□□ -1.08
CTNND1-220ENST00000529526 ITGA9Q13797 1035 aa8.33□□□□□ -1.08
CTNND1-220ENST00000529526 PLCL1Q15111 1095 aa8.33□□□□□ -1.08
CTNND1-220ENST00000529526 ZCWPW2Q504Y3 356 aa8.33□□□□□ -1.08
CTNND1-220ENST00000529526 ARHGAP17Q68EM7 881 aa8.33□□□□□ -1.08
CTNND1-220ENST00000529526 MFSD7Q6UXD7 560 aa8.33□□□□□ -1.08
CTNND1-220ENST00000529526 ZCCHC23Q6ZST2 131 aa8.33□□□□□ -1.08
CTNND1-220ENST00000529526 KCNK18Q7Z418 384 aa8.33□□□□□ -1.08
CTNND1-220ENST00000529526 SLC2A14Q8TDB8 520 aa8.33□□□□□ -1.08
CTNND1-220ENST00000529526 TCP10LQ8TDR4 215 aa8.33□□□□□ -1.08
CTNND1-220ENST00000529526 FIG4Q92562 907 aa8.33□□□□□ -1.08
CTNND1-220ENST00000529526 KLHL4Q9C0H6 718 aa8.33□□□□□ -1.08
CTNND1-220ENST00000529526 NMRK1Q9NWW6 199 aa8.33□□□□□ -1.08
CTNND1-220ENST00000529526 NINJ2Q9NZG7 142 aa8.33□□□□□ -1.08
CTNND1-220ENST00000529526 SLC24A2Q9UI40 661 aa8.33□□□□□ -1.08
CTNND1-220ENST00000529526 DNPEPQ9ULA0 475 aa8.33□□□□□ -1.08
CTNND1-220ENST00000529526 DDX3XO00571 662 aaKnown RBP eCLIP8.33□□□□□ -1.082e-13■□□□□ 9.3
CTNND1-220ENST00000529526 KIF1CO43896 1103 aaKnown RBP8.33□□□□□ -1.08
CTNND1-220ENST00000529526 ALDH2P05091 517 aa8.33□□□□□ -1.08
CTNND1-220ENST00000529526 OR1E1P30953 314 aa8.33□□□□□ -1.08
CTNND1-220ENST00000529526 BFSP2Q13515 415 aa8.33□□□□□ -1.08
CTNND1-220ENST00000529526 IZUMO2Q6UXV1 221 aa8.33□□□□□ -1.08
CTNND1-220ENST00000529526 BNIPLQ7Z465 357 aa8.33□□□□□ -1.08
CTNND1-220ENST00000529526 REPS2Q8NFH8 660 aa8.33□□□□□ -1.08
CTNND1-220ENST00000529526 HTR3CQ8WXA8 447 aa8.33□□□□□ -1.08
CTNND1-220ENST00000529526 EMILIN2Q9BXX0 1053 aa8.33□□□□□ -1.08
CTNND1-220ENST00000529526 NUDT5Q9UKK9 219 aa8.33□□□□□ -1.08
CTNND1-220ENST00000529526 KIF20BQ96Q89 1820 aa8.33□□□□□ -1.08
CTNND1-220ENST00000529526 DNALI1O14645 258 aaPredicted RBP8.33□□□□□ -1.08
CTNND1-220ENST00000529526 UBDO15205 165 aa8.33□□□□□ -1.08
CTNND1-220ENST00000529526 GSTM1P09488 218 aa8.33□□□□□ -1.08
CTNND1-220ENST00000529526 USP17L7P0C7H9 530 aa8.33□□□□□ -1.08
CTNND1-220ENST00000529526 PECAM1P16284 738 aaPredicted RBP8.33□□□□□ -1.08
CTNND1-220ENST00000529526 ALDH9A1P49189 494 aa8.33□□□□□ -1.08
CTNND1-220ENST00000529526 SARSP49591 514 aaKnown RBP8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms