RNA–Protein interactions for RNA: ENST00000529288.1

CPSF1-204, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 2

Gene CPSF1, Length 588 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-204ENST00000529288 VDRP11473 427 aa13.6□□□□□ -0.23
CPSF1-204ENST00000529288 SPINK2P20155 84 aa13.6□□□□□ -0.23
CPSF1-204ENST00000529288 IL12RB1P42701 662 aa13.6□□□□□ -0.23
CPSF1-204ENST00000529288 HARS2P49590 506 aaKnown RBP13.6□□□□□ -0.23
CPSF1-204ENST00000529288 NUCB2P80303 420 aa13.6□□□□□ -0.23
CPSF1-204ENST00000529288 LRRC63Q05C16 580 aa13.6□□□□□ -0.23
CPSF1-204ENST00000529288 BST2Q10589 180 aaKnown RBP13.6□□□□□ -0.23
CPSF1-204ENST00000529288 RAB41Q5JT25 222 aa13.6□□□□□ -0.23
CPSF1-204ENST00000529288 SLC23A3Q6PIS1 610 aa13.6□□□□□ -0.23
CPSF1-204ENST00000529288 TMEM270Q6UE05 265 aa13.6□□□□□ -0.23
CPSF1-204ENST00000529288 CACUL1Q86Y37 369 aa13.6□□□□□ -0.23
CPSF1-204ENST00000529288 HDDC3Q8N4P3 179 aa13.6□□□□□ -0.23
CPSF1-204ENST00000529288 ZNF276Q8N554 614 aa13.6□□□□□ -0.23
CPSF1-204ENST00000529288 CEP76Q8TAP6 659 aa13.6□□□□□ -0.23
CPSF1-204ENST00000529288 SORCS1Q8WY21 1168 aa13.6□□□□□ -0.23
CPSF1-204ENST00000529288 MRGPRX1Q96LB2 322 aa13.6□□□□□ -0.23
CPSF1-204ENST00000529288 SLC32A1Q9H598 525 aa13.6□□□□□ -0.23
CPSF1-204ENST00000529288 PRDM16Q9HAZ2 1276 aa13.6□□□□□ -0.23
CPSF1-204ENST00000529288 FBXO10Q9UK96 956 aa13.6□□□□□ -0.23
CPSF1-204ENST00000529288 CLEC4EQ9ULY5 219 aa13.6□□□□□ -0.23
CPSF1-204ENST00000529288 MYOFQ9NZM1 2061 aa13.6□□□□□ -0.23
CPSF1-204ENST00000529288 KIAA1549LQ6ZVL6 1849 aa13.6□□□□□ -0.23
CPSF1-204ENST00000529288 CALCAP01258 141 aa13.59□□□□□ -0.23
CPSF1-204ENST00000529288 TBXAS1P24557 533 aaPredicted RBP13.59□□□□□ -0.23
CPSF1-204ENST00000529288 MAOBP27338 520 aa13.59□□□□□ -0.23
CPSF1-204ENST00000529288 FUT11Q495W5 492 aa13.59□□□□□ -0.23
CPSF1-204ENST00000529288 SYCP2LQ5T4T6 812 aa13.59□□□□□ -0.23
CPSF1-204ENST00000529288 BSPRYQ5W0U4 402 aa13.59□□□□□ -0.23
CPSF1-204ENST00000529288 PM20D1Q6GTS8 502 aa13.59□□□□□ -0.23
CPSF1-204ENST00000529288 ANKS1BQ7Z6G8 1248 aa13.59□□□□□ -0.23
CPSF1-204ENST00000529288 SLC41A1Q8IVJ1 513 aa13.59□□□□□ -0.23
CPSF1-204ENST00000529288 PPM1KQ8N3J5 372 aa13.59□□□□□ -0.23
CPSF1-204ENST00000529288 ENGASEQ8NFI3 743 aa13.59□□□□□ -0.23
CPSF1-204ENST00000529288 OR2I1PQ8NGU4 316 aa13.59□□□□□ -0.23
CPSF1-204ENST00000529288 SLC35C1Q96A29 364 aa13.59□□□□□ -0.23
CPSF1-204ENST00000529288 PLD4Q96BZ4 506 aa13.59□□□□□ -0.23
CPSF1-204ENST00000529288 NT5C1BQ96P26 610 aa13.59□□□□□ -0.23
CPSF1-204ENST00000529288 METTL14Q9HCE5 456 aaKnown RBP13.59□□□□□ -0.23
CPSF1-204ENST00000529288 OLA1Q9NTK5 396 aaKnown RBP13.59□□□□□ -0.23
CPSF1-204ENST00000529288 ELOVL2Q9NXB9 296 aa13.59□□□□□ -0.23
CPSF1-204ENST00000529288 THAP10Q9P2Z0 257 aaPredicted RBP13.59□□□□□ -0.23
CPSF1-204ENST00000529288 MAN1B1Q9UKM7 699 aa13.59□□□□□ -0.23
CPSF1-204ENST00000529288 SLC27A6Q9Y2P4 619 aa13.59□□□□□ -0.23
CPSF1-204ENST00000529288 COQ4Q9Y3A0 265 aa13.59□□□□□ -0.23
CPSF1-204ENST00000529288 ABCA7Q8IZY2 2146 aa13.58□□□□□ -0.23
CPSF1-204ENST00000529288 YJEFN3A6XGL0 299 aa13.58□□□□□ -0.24
CPSF1-204ENST00000529288 MEI4A8MW99 385 aa13.58□□□□□ -0.24
CPSF1-204ENST00000529288 E7ENQ6 273 aa13.58□□□□□ -0.24
CPSF1-204ENST00000529288 M0QYV0 167 aa13.58□□□□□ -0.24
CPSF1-204ENST00000529288 O00370 1275 aa13.58□□□□□ -0.24
CPSF1-204ENST00000529288 MSI1O43347 362 aaKnown RBP13.58□□□□□ -0.24
CPSF1-204ENST00000529288 OPHN1O60890 802 aa13.58□□□□□ -0.24
CPSF1-204ENST00000529288 TOP3BO95985 862 aaKnown RBP13.58□□□□□ -0.24
CPSF1-204ENST00000529288 EPHX1P07099 455 aa13.58□□□□□ -0.24
CPSF1-204ENST00000529288 SERPINF2P08697 491 aa13.58□□□□□ -0.24
CPSF1-204ENST00000529288 ACADMP11310 421 aa13.58□□□□□ -0.24
CPSF1-204ENST00000529288 CEACAM1P13688 526 aa13.58□□□□□ -0.24
CPSF1-204ENST00000529288 CD44P16070 742 aaKnown RBP13.58□□□□□ -0.24
CPSF1-204ENST00000529288 CSRP1P21291 193 aaKnown RBP13.58□□□□□ -0.24
CPSF1-204ENST00000529288 CD6P30203 668 aa13.58□□□□□ -0.24
CPSF1-204ENST00000529288 FMO5P49326 533 aa13.58□□□□□ -0.24
CPSF1-204ENST00000529288 MCCD1P59942 119 aaPredicted RBP13.58□□□□□ -0.24
CPSF1-204ENST00000529288 CETN1Q12798 172 aa13.58□□□□□ -0.24
CPSF1-204ENST00000529288 ZNF234Q14588 700 aa13.58□□□□□ -0.24
CPSF1-204ENST00000529288 PLEKHG6Q3KR16 790 aa13.58□□□□□ -0.24
CPSF1-204ENST00000529288 MPPE1Q53F39 396 aa13.58□□□□□ -0.24
CPSF1-204ENST00000529288 COBLL1Q53SF7 1204 aa13.58□□□□□ -0.24
CPSF1-204ENST00000529288 RRAGAQ7L523 313 aa13.58□□□□□ -0.24
CPSF1-204ENST00000529288 ZC3H3Q8IXZ2 948 aaKnown RBP13.58□□□□□ -0.24
CPSF1-204ENST00000529288 CPXM2Q8N436 756 aa13.58□□□□□ -0.24
CPSF1-204ENST00000529288 KAT5Q92993 513 aa13.58□□□□□ -0.24
CPSF1-204ENST00000529288 TOE1Q96GM8 510 aaKnown RBP13.58□□□□□ -0.24
CPSF1-204ENST00000529288 DHTKD1Q96HY7 919 aaPredicted RBP13.58□□□□□ -0.24
CPSF1-204ENST00000529288 GPR174Q9BXC1 333 aa13.58□□□□□ -0.24
CPSF1-204ENST00000529288 GTPBP4Q9BZE4 634 aaKnown RBP13.58□□□□□ -0.24
CPSF1-204ENST00000529288 MIR1-1HGQ9H1L0 117 aa13.58□□□□□ -0.24
CPSF1-204ENST00000529288 FAM124BQ9H5Z6 455 aaPredicted RBP13.58□□□□□ -0.24
CPSF1-204ENST00000529288 CD248Q9HCU0 757 aa13.58□□□□□ -0.24
CPSF1-204ENST00000529288 KIAA1257Q9ULG3 409 aa13.58□□□□□ -0.24
CPSF1-204ENST00000529288 THADAQ6YHU6 1953 aa13.58□□□□□ -0.24
CPSF1-204ENST00000529288 SPAARA0A1B0GVQ0 90 aa13.57□□□□□ -0.24
CPSF1-204ENST00000529288 BIN1O00499 593 aa13.57□□□□□ -0.24
CPSF1-204ENST00000529288 SETSIPP0DME0 302 aa13.57□□□□□ -0.24
CPSF1-204ENST00000529288 HLA-EP13747 358 aa13.57□□□□□ -0.24
CPSF1-204ENST00000529288 GNSP15586 552 aa13.57□□□□□ -0.24
CPSF1-204ENST00000529288 PRKCHP24723 683 aa13.57□□□□□ -0.24
CPSF1-204ENST00000529288 BRD2P25440 801 aaKnown RBP13.57□□□□□ -0.24
CPSF1-204ENST00000529288 STX17P56962 302 aa13.57□□□□□ -0.24
CPSF1-204ENST00000529288 SHC2P98077 582 aa13.57□□□□□ -0.24
CPSF1-204ENST00000529288 TRIP4Q15650 581 aaPredicted RBP13.57□□□□□ -0.24
CPSF1-204ENST00000529288 FNDC3BQ53EP0 1204 aaKnown RBP13.57□□□□□ -0.24
CPSF1-204ENST00000529288 SERPINA13PQ6UXR4 307 aa13.57□□□□□ -0.24
CPSF1-204ENST00000529288 BHLHA9Q7RTU4 235 aa13.57□□□□□ -0.24
CPSF1-204ENST00000529288 RABEPKQ7Z6M1 372 aa13.57□□□□□ -0.24
CPSF1-204ENST00000529288 FAM124AQ86V42 546 aa13.57□□□□□ -0.24
CPSF1-204ENST00000529288 TMPRSS6Q8IU80 811 aa13.57□□□□□ -0.24
CPSF1-204ENST00000529288 CREBRFQ8IUR6 639 aa13.57□□□□□ -0.24
CPSF1-204ENST00000529288 MINDY1Q8N5J2 469 aa13.57□□□□□ -0.24
CPSF1-204ENST00000529288 CYB5D2Q8WUJ1 264 aa13.57□□□□□ -0.24
CPSF1-204ENST00000529288 NELFBQ8WX92 580 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms