RNA–Protein interactions for RNA: ENST00000528930.5

SSBP3-212, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 1 (best)

Gene SSBP3, Length 862 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-212ENST00000528930 USP39Q53GS9 565 aaKnown RBP8.99□□□□□ -0.97
SSBP3-212ENST00000528930 TMEM150AQ86TG1 271 aa8.99□□□□□ -0.97
SSBP3-212ENST00000528930 ITIH5Q86UX2 942 aa8.99□□□□□ -0.97
SSBP3-212ENST00000528930 ZC3H3Q8IXZ2 948 aaKnown RBP8.99□□□□□ -0.97
SSBP3-212ENST00000528930 FAM186BQ8IYM0 893 aa8.99□□□□□ -0.97
SSBP3-212ENST00000528930 OR2I1PQ8NGU4 316 aa8.99□□□□□ -0.97
SSBP3-212ENST00000528930 BAHD1Q8TBE0 780 aaPredicted RBP8.99□□□□□ -0.97
SSBP3-212ENST00000528930 GIPC2Q8TF65 315 aa8.99□□□□□ -0.97
SSBP3-212ENST00000528930 SMARCE1Q969G3 411 aa8.99□□□□□ -0.97
SSBP3-212ENST00000528930 SYAP1Q96A49 352 aaPredicted RBP8.99□□□□□ -0.97
SSBP3-212ENST00000528930 E2F7Q96AV8 911 aa8.99□□□□□ -0.97
SSBP3-212ENST00000528930 KCTD15Q96SI1 283 aaPredicted RBP8.99□□□□□ -0.97
SSBP3-212ENST00000528930 MMS19Q96T76 1030 aa8.99□□□□□ -0.97
SSBP3-212ENST00000528930 SYT15Q9BQS2 421 aa8.99□□□□□ -0.97
SSBP3-212ENST00000528930 ABCB6Q9NP58 842 aa8.99□□□□□ -0.97
SSBP3-212ENST00000528930 MAN1B1Q9UKM7 699 aa8.99□□□□□ -0.97
SSBP3-212ENST00000528930 PCOLCE2Q9UKZ9 415 aa8.99□□□□□ -0.97
SSBP3-212ENST00000528930 CDH9Q9ULB4 789 aa8.99□□□□□ -0.97
SSBP3-212ENST00000528930 FRMD4BQ9Y2L6 1034 aa8.99□□□□□ -0.97
SSBP3-212ENST00000528930 UTP20O75691 2785 aaKnown RBP8.98□□□□□ -0.97
SSBP3-212ENST00000528930 RRP9O43818 475 aaKnown RBP8.98□□□□□ -0.97
SSBP3-212ENST00000528930 ASS1P00966 412 aaKnown RBP8.98□□□□□ -0.97
SSBP3-212ENST00000528930 F11P03951 625 aa8.98□□□□□ -0.97
SSBP3-212ENST00000528930 TRIM49P0CI25 452 aa8.98□□□□□ -0.97
SSBP3-212ENST00000528930 TRIM49CP0CI26 452 aa8.98□□□□□ -0.97
SSBP3-212ENST00000528930 GABRR2P28476 465 aa8.98□□□□□ -0.97
SSBP3-212ENST00000528930 PSMC2P35998 433 aaKnown RBP8.98□□□□□ -0.97
SSBP3-212ENST00000528930 PTGER3P43115 390 aa8.98□□□□□ -0.97
SSBP3-212ENST00000528930 CDH8P55286 799 aa8.98□□□□□ -0.97
SSBP3-212ENST00000528930 TNNC1P63316 161 aa8.98□□□□□ -0.97
SSBP3-212ENST00000528930 SMAD1Q15797 465 aaKnown RBP8.98□□□□□ -0.97
SSBP3-212ENST00000528930 DDR2Q16832 855 aa8.98□□□□□ -0.97
SSBP3-212ENST00000528930 DUOXA1Q1HG43 343 aa8.98□□□□□ -0.97
SSBP3-212ENST00000528930 SGSM1Q2NKQ1 1148 aa8.98□□□□□ -0.97
SSBP3-212ENST00000528930 ZNF699Q32M78 642 aa8.98□□□□□ -0.97
SSBP3-212ENST00000528930 ZNF667Q5HYK9 610 aa8.98□□□□□ -0.97
SSBP3-212ENST00000528930 STXBP5Q5T5C0 1151 aa8.98□□□□□ -0.97
SSBP3-212ENST00000528930 SDHAF4Q5VUM1 108 aa8.98□□□□□ -0.97
SSBP3-212ENST00000528930 ANKRD40Q6AI12 368 aa8.98□□□□□ -0.97
SSBP3-212ENST00000528930 ISM2Q6H9L7 571 aa8.98□□□□□ -0.97
SSBP3-212ENST00000528930 INTS8Q75QN2 995 aaKnown RBP8.98□□□□□ -0.97
SSBP3-212ENST00000528930 RASSF3Q86WH2 238 aa8.98□□□□□ -0.97
SSBP3-212ENST00000528930 SPATA2LQ8IUW3 424 aaPredicted RBP8.98□□□□□ -0.97
SSBP3-212ENST00000528930 STKLD1Q8NE28 680 aa8.98□□□□□ -0.97
SSBP3-212ENST00000528930 OR6B3Q8NGW1 331 aa8.98□□□□□ -0.97
SSBP3-212ENST00000528930 MYCBPAPQ8TBZ2 947 aa8.98□□□□□ -0.97
SSBP3-212ENST00000528930 MYLPFQ96A32 169 aa8.98□□□□□ -0.97
SSBP3-212ENST00000528930 EEF2KMTQ96G04 330 aa8.98□□□□□ -0.97
SSBP3-212ENST00000528930 FUBP3Q96I24 572 aaKnown RBP eCLIP8.98□□□□□ -0.97
SSBP3-212ENST00000528930 GPR88Q9GZN0 384 aa8.98□□□□□ -0.97
SSBP3-212ENST00000528930 SDCBP2Q9H190 292 aa8.98□□□□□ -0.97
SSBP3-212ENST00000528930 ATXN3LQ9H3M9 355 aa8.98□□□□□ -0.97
SSBP3-212ENST00000528930 DPEP3Q9H4B8 488 aa8.98□□□□□ -0.97
SSBP3-212ENST00000528930 SMYD3Q9H7B4 428 aa8.98□□□□□ -0.97
SSBP3-212ENST00000528930 GTSE1Q9NYZ3 720 aa8.98□□□□□ -0.97
SSBP3-212ENST00000528930 HOOK1Q9UJC3 728 aaKnown RBP8.98□□□□□ -0.97
SSBP3-212ENST00000528930 ZNF638Q14966 1978 aaKnown RBP8.98□□□□□ -0.97
SSBP3-212ENST00000528930 ATXN2Q99700 1313 aaKnown RBP8.98□□□□□ -0.97
SSBP3-212ENST00000528930 FAM149AA5PLN7 773 aa8.97□□□□□ -0.97
SSBP3-212ENST00000528930 TRIM49BA6NDI0 452 aa8.97□□□□□ -0.97
SSBP3-212ENST00000528930 A8MXQ7 604 aa8.97□□□□□ -0.97
SSBP3-212ENST00000528930 CETN3O15182 167 aa8.97□□□□□ -0.97
SSBP3-212ENST00000528930 NOL4O94818 638 aa8.97□□□□□ -0.97
SSBP3-212ENST00000528930 FGF19O95750 216 aa8.97□□□□□ -0.97
SSBP3-212ENST00000528930 HLA-DRAP01903 254 aa8.97□□□□□ -0.97
SSBP3-212ENST00000528930 AFPP02771 609 aaKnown RBP8.97□□□□□ -0.97
SSBP3-212ENST00000528930 CFIP05156 583 aa8.97□□□□□ -0.97
SSBP3-212ENST00000528930 CSH1P0DML2 217 aa8.97□□□□□ -0.97
SSBP3-212ENST00000528930 CSH2P0DML3 217 aa8.97□□□□□ -0.97
SSBP3-212ENST00000528930 KRT13P13646 458 aa8.97□□□□□ -0.97
SSBP3-212ENST00000528930 PTPN1P18031 435 aaKnown RBP8.97□□□□□ -0.97
SSBP3-212ENST00000528930 BDNFP23560 247 aa8.97□□□□□ -0.97
SSBP3-212ENST00000528930 MAGEA11P43364 429 aa8.97□□□□□ -0.97
SSBP3-212ENST00000528930 GCLMP48507 274 aa8.97□□□□□ -0.97
SSBP3-212ENST00000528930 DGKEP52429 567 aa8.97□□□□□ -0.97
SSBP3-212ENST00000528930 UBE2HP62256 183 aa8.97□□□□□ -0.97
SSBP3-212ENST00000528930 RPL10AP62906 217 aaKnown RBP8.97□□□□□ -0.97
SSBP3-212ENST00000528930 CYP4F8P98187 520 aa8.97□□□□□ -0.97
SSBP3-212ENST00000528930 GFPT1Q06210 699 aaPredicted RBP8.97□□□□□ -0.97
SSBP3-212ENST00000528930 MORC3Q14149 939 aa8.97□□□□□ -0.97
SSBP3-212ENST00000528930 DMC1Q14565 340 aa8.97□□□□□ -0.97
SSBP3-212ENST00000528930 VEPH1Q14D04 833 aa8.97□□□□□ -0.97
SSBP3-212ENST00000528930 MAPRE1Q15691 268 aaKnown RBP8.97□□□□□ -0.97
SSBP3-212ENST00000528930 MDH1BQ5I0G3 518 aa8.97□□□□□ -0.97
SSBP3-212ENST00000528930 SPOPLQ6IQ16 392 aa8.97□□□□□ -0.97
SSBP3-212ENST00000528930 C4orf50Q6ZRC1 276 aa8.97□□□□□ -0.97
SSBP3-212ENST00000528930 ARID3BQ8IVW6 561 aaPredicted RBP8.97□□□□□ -0.97
SSBP3-212ENST00000528930 SPACA3Q8IXA5 215 aa8.97□□□□□ -0.97
SSBP3-212ENST00000528930 OLIG1Q8TAK6 271 aa8.97□□□□□ -0.97
SSBP3-212ENST00000528930 CEP76Q8TAP6 659 aa8.97□□□□□ -0.97
SSBP3-212ENST00000528930 ZSCAN18Q8TBC5 510 aaPredicted RBP8.97□□□□□ -0.97
SSBP3-212ENST00000528930 TAS1R2Q8TE23 839 aa8.97□□□□□ -0.97
SSBP3-212ENST00000528930 SNRNP27Q8WVK2 155 aaKnown RBP8.97□□□□□ -0.97
SSBP3-212ENST00000528930 TAF4BQ92750 862 aa8.97□□□□□ -0.97
SSBP3-212ENST00000528930 CHFRQ96EP1 664 aa8.97□□□□□ -0.97
SSBP3-212ENST00000528930 PCED1BQ96HM7 432 aa8.97□□□□□ -0.97
SSBP3-212ENST00000528930 MYRFLQ96LU7 910 aa8.97□□□□□ -0.97
SSBP3-212ENST00000528930 LRRC3BQ96PB8 259 aa8.97□□□□□ -0.97
SSBP3-212ENST00000528930 ARHGAP9Q9BRR9 750 aa8.97□□□□□ -0.97
SSBP3-212ENST00000528930 SLC46A2Q9BY10 475 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms