RNA–Protein interactions for RNA: ENST00000527881.1

TSKU-203, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSKU, Length 3,554 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-203ENST00000527881 LILRA2Q8N149 483 aa12.87□□□□□ -0.35
TSKU-203ENST00000527881 FAM47BQ8NA70 645 aa12.87□□□□□ -0.35
TSKU-203ENST00000527881 KYQ8NBH2 561 aa12.87□□□□□ -0.35
TSKU-203ENST00000527881 SPATA18Q8TC71 538 aa12.87□□□□□ -0.35
TSKU-203ENST00000527881 NLRP4Q96MN2 994 aa12.87□□□□□ -0.35
TSKU-203ENST00000527881 FAM213AQ9BRX8 229 aa12.87□□□□□ -0.35
TSKU-203ENST00000527881 KLC2Q9H0B6 622 aa12.87□□□□□ -0.35
TSKU-203ENST00000527881 KLHL25Q9H0H3 589 aa12.87□□□□□ -0.35
TSKU-203ENST00000527881 SLC38A7Q9NVC3 462 aa12.87□□□□□ -0.35
TSKU-203ENST00000527881 WNK3Q9BYP7 1800 aa12.87□□□□□ -0.35
TSKU-203ENST00000527881 CNTNAP2Q9UHC6 1331 aa12.87□□□□□ -0.35
TSKU-203ENST00000527881 MYH14Q7Z406 1995 aaKnown RBP12.87□□□□□ -0.35
TSKU-203ENST00000527881 CNOT3O75175 753 aaKnown RBP12.87□□□□□ -0.35
TSKU-203ENST00000527881 SPAG6O75602 509 aa12.87□□□□□ -0.35
TSKU-203ENST00000527881 EPHA3P29320 983 aa12.87□□□□□ -0.35
TSKU-203ENST00000527881 RFC1P35251 1148 aaPredicted RBP12.87□□□□□ -0.35
TSKU-203ENST00000527881 TTC33Q6PID6 262 aaPredicted RBP12.87□□□□□ -0.35
TSKU-203ENST00000527881 KCTD6Q8NC69 237 aa12.87□□□□□ -0.35
TSKU-203ENST00000527881 SLC35B2Q8TB61 432 aa12.87□□□□□ -0.35
TSKU-203ENST00000527881 RNPEPQ9H4A4 650 aa12.87□□□□□ -0.35
TSKU-203ENST00000527881 COQ10BQ9H8M1 238 aa12.87□□□□□ -0.35
TSKU-203ENST00000527881 C20orf96Q9NUD7 363 aaPredicted RBP12.87□□□□□ -0.35
TSKU-203ENST00000527881 PPP1R1BQ9UD71 204 aaPredicted RBP12.87□□□□□ -0.35
TSKU-203ENST00000527881 SQORQ9Y6N5 450 aa12.87□□□□□ -0.35
TSKU-203ENST00000527881 ZNF142P52746 1687 aaPredicted RBP12.87□□□□□ -0.35
TSKU-203ENST00000527881 TMEM150BA6NC51 233 aa12.87□□□□□ -0.35
TSKU-203ENST00000527881 SNNO75324 88 aaPredicted RBP12.87□□□□□ -0.35
TSKU-203ENST00000527881 RFPL1O75677 317 aa12.87□□□□□ -0.35
TSKU-203ENST00000527881 ESRRBO95718 433 aa12.87□□□□□ -0.35
TSKU-203ENST00000527881 PSMA2P25787 234 aa12.87□□□□□ -0.35
TSKU-203ENST00000527881 NOMO3P69849 1222 aa12.87□□□□□ -0.35
TSKU-203ENST00000527881 ZNF829Q3KNS6 432 aaPredicted RBP12.87□□□□□ -0.35
TSKU-203ENST00000527881 WDR78Q5VTH9 848 aa12.87□□□□□ -0.35
TSKU-203ENST00000527881 TPTE2Q6XPS3 522 aa12.87□□□□□ -0.35
TSKU-203ENST00000527881 ARCQ7LC44 396 aa12.87□□□□□ -0.35
TSKU-203ENST00000527881 ATP6V0A1Q93050 837 aa12.87□□□□□ -0.35
TSKU-203ENST00000527881 SNX27Q96L92 541 aa12.87□□□□□ -0.35
TSKU-203ENST00000527881 WDR18Q9BV38 432 aa12.87□□□□□ -0.35
TSKU-203ENST00000527881 EXOC7Q9UPT5 735 aa12.87□□□□□ -0.35
TSKU-203ENST00000527881 GOLGA8TH3BQL2 631 aa12.86□□□□□ -0.35
TSKU-203ENST00000527881 STX16-NPEPL1H3BU86 382 aa12.86□□□□□ -0.35
TSKU-203ENST00000527881 MAP3K6O95382 1288 aa12.86□□□□□ -0.35
TSKU-203ENST00000527881 ACAT1P24752 427 aaKnown RBP12.86□□□□□ -0.35
TSKU-203ENST00000527881 TRAF2Q12933 501 aa12.86□□□□□ -0.35
TSKU-203ENST00000527881 CCDC142Q17RM4 750 aa12.86□□□□□ -0.35
TSKU-203ENST00000527881 PPM1LQ5SGD2 360 aa12.86□□□□□ -0.35
TSKU-203ENST00000527881 TEDDM1Q5T9Z0 273 aa12.86□□□□□ -0.35
TSKU-203ENST00000527881 CYP4A22Q5TCH4 519 aa12.86□□□□□ -0.35
TSKU-203ENST00000527881 ZNF778Q96MU6 729 aa12.86□□□□□ -0.35
TSKU-203ENST00000527881 SLC4A5Q9BY07 1137 aa12.86□□□□□ -0.35
TSKU-203ENST00000527881 DDX56Q9NY93 547 aaKnown RBP12.86□□□□□ -0.35
TSKU-203ENST00000527881 ZNHIT2Q9UHR6 403 aa12.86□□□□□ -0.35
TSKU-203ENST00000527881 RIMS3Q9UJD0 308 aa12.86□□□□□ -0.35
TSKU-203ENST00000527881 ZNF536O15090 1300 aa12.86□□□□□ -0.35
TSKU-203ENST00000527881 NFASCO94856 1347 aa12.86□□□□□ -0.35
TSKU-203ENST00000527881 E7ESA3 106 aa12.86□□□□□ -0.35
TSKU-203ENST00000527881 OSBPP22059 807 aa12.86□□□□□ -0.35
TSKU-203ENST00000527881 CYP2A13Q16696 494 aa12.86□□□□□ -0.35
TSKU-203ENST00000527881 METTL21CQ5VZV1 264 aa12.86□□□□□ -0.35
TSKU-203ENST00000527881 TATDN1Q6P1N9 297 aa12.86□□□□□ -0.35
TSKU-203ENST00000527881 SH2D5Q6ZV89 423 aa12.86□□□□□ -0.35
TSKU-203ENST00000527881 ENOSF1Q7L5Y1 443 aa12.86□□□□□ -0.35
TSKU-203ENST00000527881 ZNF677Q86XU0 584 aa12.86□□□□□ -0.35
TSKU-203ENST00000527881 ADAM32Q8TC27 787 aa12.86□□□□□ -0.35
TSKU-203ENST00000527881 CIB1Q99828 191 aa12.86□□□□□ -0.35
TSKU-203ENST00000527881 NEURL2Q9BR09 285 aa12.86□□□□□ -0.35
TSKU-203ENST00000527881 TEKT3Q9BXF9 490 aa12.86□□□□□ -0.35
TSKU-203ENST00000527881 CLK4Q9HAZ1 481 aaKnown RBP12.86□□□□□ -0.35
TSKU-203ENST00000527881 PNPLA3Q9NST1 481 aa12.86□□□□□ -0.35
TSKU-203ENST00000527881 SUN2Q9UH99 717 aa12.86□□□□□ -0.35
TSKU-203ENST00000527881 RNF11Q9Y3C5 154 aa12.86□□□□□ -0.35
TSKU-203ENST00000527881 LOC102724428A0A0B4J2F2 783 aa12.86□□□□□ -0.35
TSKU-203ENST00000527881 CFAP99D6REC4 459 aa12.86□□□□□ -0.35
TSKU-203ENST00000527881 HNRNPDLO14979 420 aaKnown RBP12.86□□□□□ -0.35
TSKU-203ENST00000527881 STAM2O75886 525 aa12.86□□□□□ -0.35
TSKU-203ENST00000527881 HLA-DOAP06340 250 aa12.86□□□□□ -0.35
TSKU-203ENST00000527881 CSH1P0DML2 217 aa12.86□□□□□ -0.35
TSKU-203ENST00000527881 CSH2P0DML3 217 aa12.86□□□□□ -0.35
TSKU-203ENST00000527881 SIK1P57059 783 aa12.86□□□□□ -0.35
TSKU-203ENST00000527881 SETD3Q86TU7 594 aaPredicted RBP12.86□□□□□ -0.35
TSKU-203ENST00000527881 DSELQ8IZU8 1212 aa12.86□□□□□ -0.35
TSKU-203ENST00000527881 ABRAQ8N0Z2 381 aa12.86□□□□□ -0.35
TSKU-203ENST00000527881 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.86□□□□□ -0.35
TSKU-203ENST00000527881 KCND2Q9NZV8 630 aa12.86□□□□□ -0.35
TSKU-203ENST00000527881 DAPK2Q9UIK4 370 aa12.86□□□□□ -0.35
TSKU-203ENST00000527881 PADI4Q9UM07 663 aa12.86□□□□□ -0.35
TSKU-203ENST00000527881 ZC3H11AO75152 810 aaKnown RBP eCLIP12.85□□□□□ -0.35
TSKU-203ENST00000527881 SERPINE1P05121 402 aa12.85□□□□□ -0.35
TSKU-203ENST00000527881 MAP4P27816 1152 aaKnown RBP12.85□□□□□ -0.35
TSKU-203ENST00000527881 ETFBP38117 255 aa12.85□□□□□ -0.35
TSKU-203ENST00000527881 ROR1Q01973 937 aa12.85□□□□□ -0.35
TSKU-203ENST00000527881 GNA12Q03113 381 aa12.85□□□□□ -0.35
TSKU-203ENST00000527881 C10orf107Q8IVU9 208 aa12.85□□□□□ -0.35
TSKU-203ENST00000527881 ATP6V1E2Q96A05 226 aa12.85□□□□□ -0.35
TSKU-203ENST00000527881 RCN3Q96D15 328 aa12.85□□□□□ -0.35
TSKU-203ENST00000527881 RTKNQ9BST9 563 aa12.85□□□□□ -0.35
TSKU-203ENST00000527881 FAM96AQ9H5X1 160 aa12.85□□□□□ -0.35
TSKU-203ENST00000527881 TBC1D22BQ9NU19 505 aa12.85□□□□□ -0.35
TSKU-203ENST00000527881 ATAD3AQ9NVI7 634 aa12.85□□□□□ -0.35
TSKU-203ENST00000527881 CROCCQ5TZA2 2017 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms