RNA–Protein interactions for RNA: ENST00000527464.5

NR1H3-229, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 1 (best)

Gene NR1H3, Length 1,183 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-229ENST00000527464 SERPINB11Q96P15 392 aa17.6■□□□□ 0.41
NR1H3-229ENST00000527464 CPXM1Q96SM3 734 aa17.6■□□□□ 0.41
NR1H3-229ENST00000527464 FUCA2Q9BTY2 467 aa17.6■□□□□ 0.41
NR1H3-229ENST00000527464 PDCL3Q9H2J4 239 aa17.6■□□□□ 0.41
NR1H3-229ENST00000527464 FAM207AQ9NSI2 230 aaPredicted RBP17.6■□□□□ 0.41
NR1H3-229ENST00000527464 DNAJC17Q9NVM6 304 aaKnown RBP17.6■□□□□ 0.41
NR1H3-229ENST00000527464 C2orf42Q9NWW7 574 aa17.6■□□□□ 0.41
NR1H3-229ENST00000527464 FBXO10Q9UK96 956 aa17.6■□□□□ 0.41
NR1H3-229ENST00000527464 USP34Q70CQ2 3546 aa17.59■□□□□ 0.41
NR1H3-229ENST00000527464 CAPN9O14815 690 aa17.59■□□□□ 0.41
NR1H3-229ENST00000527464 POLR2FP61218 127 aaKnown RBP17.59■□□□□ 0.41
NR1H3-229ENST00000527464 UBXN1Q04323 297 aa17.59■□□□□ 0.41
NR1H3-229ENST00000527464 KDSRQ06136 332 aa17.59■□□□□ 0.41
NR1H3-229ENST00000527464 MESP2Q0VG99 397 aa17.59■□□□□ 0.41
NR1H3-229ENST00000527464 DMC1Q14565 340 aa17.59■□□□□ 0.41
NR1H3-229ENST00000527464 SYCP1Q15431 976 aa17.59■□□□□ 0.41
NR1H3-229ENST00000527464 EFHC1Q5JVL4 640 aa17.59■□□□□ 0.41
NR1H3-229ENST00000527464 ADGRF1Q5T601 910 aa17.59■□□□□ 0.41
NR1H3-229ENST00000527464 ASCL5Q7RTU5 278 aa17.59■□□□□ 0.41
NR1H3-229ENST00000527464 WDR5BQ86VZ2 330 aa17.59■□□□□ 0.41
NR1H3-229ENST00000527464 ZNF677Q86XU0 584 aa17.59■□□□□ 0.41
NR1H3-229ENST00000527464 ZDHHC17Q8IUH5 632 aa17.59■□□□□ 0.41
NR1H3-229ENST00000527464 PASD1Q8IV76 773 aa17.59■□□□□ 0.41
NR1H3-229ENST00000527464 C1orf131Q8NDD1 294 aaKnown RBP17.59■□□□□ 0.41
NR1H3-229ENST00000527464 NEK11Q8NG66 645 aa17.59■□□□□ 0.41
NR1H3-229ENST00000527464 DQX1Q8TE96 717 aaKnown RBP17.59■□□□□ 0.41
NR1H3-229ENST00000527464 IPO4Q8TEX9 1081 aaKnown RBP17.59■□□□□ 0.41
NR1H3-229ENST00000527464 EPC1Q9H2F5 836 aa17.59■□□□□ 0.41
NR1H3-229ENST00000527464 MMP17Q9ULZ9 603 aa17.59■□□□□ 0.41
NR1H3-229ENST00000527464 TLR6Q9Y2C9 796 aa17.59■□□□□ 0.41
NR1H3-229ENST00000527464 STARD13Q9Y3M8 1113 aa17.59■□□□□ 0.41
NR1H3-229ENST00000527464 DMDP11532 3685 aa17.59■□□□□ 0.41
NR1H3-229ENST00000527464 SPAG17Q6Q759 2223 aa17.59■□□□□ 0.41
NR1H3-229ENST00000527464 MSI1O43347 362 aaKnown RBP17.58■□□□□ 0.4
NR1H3-229ENST00000527464 LSM8O95777 96 aaKnown RBP17.58■□□□□ 0.4
NR1H3-229ENST00000527464 CHRM1P11229 460 aaPredicted RBP17.58■□□□□ 0.4
NR1H3-229ENST00000527464 KIR2DL1P43626 348 aaPredicted RBP17.58■□□□□ 0.4
NR1H3-229ENST00000527464 SLC11A2P49281 568 aa17.58■□□□□ 0.4
NR1H3-229ENST00000527464 DGKGP49619 791 aa17.58■□□□□ 0.4
NR1H3-229ENST00000527464 SEC13P55735 322 aa17.58■□□□□ 0.4
NR1H3-229ENST00000527464 TBX4P57082 545 aa17.58■□□□□ 0.4
NR1H3-229ENST00000527464 JAM2P57087 298 aa17.58■□□□□ 0.4
NR1H3-229ENST00000527464 SKOR2Q2VWA4 1001 aaPredicted RBP17.58■□□□□ 0.4
NR1H3-229ENST00000527464 MPPE1Q53F39 396 aa17.58■□□□□ 0.4
NR1H3-229ENST00000527464 C2orf27AQ580R0 203 aa17.58■□□□□ 0.4
NR1H3-229ENST00000527464 FYB2Q5VWT5 728 aa17.58■□□□□ 0.4
NR1H3-229ENST00000527464 TRMT11Q7Z4G4 463 aaKnown RBP17.58■□□□□ 0.4
NR1H3-229ENST00000527464 DHX40Q8IX18 779 aaKnown RBP17.58■□□□□ 0.4
NR1H3-229ENST00000527464 SUMF1Q8NBK3 374 aa17.58■□□□□ 0.4
NR1H3-229ENST00000527464 DDX1Q92499 740 aaKnown RBP17.58■□□□□ 0.4
NR1H3-229ENST00000527464 SPAG5Q96R06 1193 aa17.58■□□□□ 0.4
NR1H3-229ENST00000527464 SLC2A11Q9BYW1 496 aa17.58■□□□□ 0.4
NR1H3-229ENST00000527464 SYNCQ9H7C4 482 aa17.58■□□□□ 0.4
NR1H3-229ENST00000527464 NAALADL1Q9UQQ1 740 aa17.58■□□□□ 0.4
NR1H3-229ENST00000527464 SLC27A6Q9Y2P4 619 aa17.58■□□□□ 0.4
NR1H3-229ENST00000527464 GFRA2O00451 464 aa17.57■□□□□ 0.4
NR1H3-229ENST00000527464 HSF2BPO75031 334 aa17.57■□□□□ 0.4
NR1H3-229ENST00000527464 APBB3O95704 486 aa17.57■□□□□ 0.4
NR1H3-229ENST00000527464 CAVIN2O95810 425 aa17.57■□□□□ 0.4
NR1H3-229ENST00000527464 CISD3P0C7P0 127 aa17.57■□□□□ 0.4
NR1H3-229ENST00000527464 ATP1A3P13637 1013 aa17.57■□□□□ 0.4
NR1H3-229ENST00000527464 SOX5P35711 763 aa17.57■□□□□ 0.4
NR1H3-229ENST00000527464 STAT1P42224 750 aa17.57■□□□□ 0.4
NR1H3-229ENST00000527464 FNTBP49356 437 aa17.57■□□□□ 0.4
NR1H3-229ENST00000527464 KLK7P49862 253 aa17.57■□□□□ 0.4
NR1H3-229ENST00000527464 E2F5Q15329 346 aa17.57■□□□□ 0.4
NR1H3-229ENST00000527464 EOGTQ5NDL2 527 aa17.57■□□□□ 0.4
NR1H3-229ENST00000527464 C10orf76Q5T2E6 689 aa17.57■□□□□ 0.4
NR1H3-229ENST00000527464 TOGARAM2Q6ZUX3 1019 aa17.57■□□□□ 0.4
NR1H3-229ENST00000527464 MSANTD4Q8NCY6 345 aa17.57■□□□□ 0.4
NR1H3-229ENST00000527464 EPS8L1Q8TE68 723 aa17.57■□□□□ 0.4
NR1H3-229ENST00000527464 SLC39A13Q96H72 371 aa17.57■□□□□ 0.4
NR1H3-229ENST00000527464 PCMTD1Q96MG8 357 aaPredicted RBP17.57■□□□□ 0.4
NR1H3-229ENST00000527464 DDX50Q9BQ39 737 aaKnown RBP17.57■□□□□ 0.4
NR1H3-229ENST00000527464 EBF1Q9UH73 591 aa17.57■□□□□ 0.4
NR1H3-229ENST00000527464 IRAK2O43187 625 aa17.56■□□□□ 0.4
NR1H3-229ENST00000527464 ACSL4O60488 711 aa17.56■□□□□ 0.4
NR1H3-229ENST00000527464 SCNN1AP37088 669 aa17.56■□□□□ 0.4
NR1H3-229ENST00000527464 GABRB2P47870 512 aa17.56■□□□□ 0.4
NR1H3-229ENST00000527464 DGKEP52429 567 aa17.56■□□□□ 0.4
NR1H3-229ENST00000527464 CDK17Q00537 523 aa17.56■□□□□ 0.4
NR1H3-229ENST00000527464 SLC6A3Q01959 620 aa17.56■□□□□ 0.4
NR1H3-229ENST00000527464 DMWDQ09019 674 aa17.56■□□□□ 0.4
NR1H3-229ENST00000527464 PTPN20Q4JDL3 420 aa17.56■□□□□ 0.4
NR1H3-229ENST00000527464 FILIP1LQ4L180 1135 aa17.56■□□□□ 0.4
NR1H3-229ENST00000527464 MPP7Q5T2T1 576 aa17.56■□□□□ 0.4
NR1H3-229ENST00000527464 SYPL2Q5VXT5 272 aa17.56■□□□□ 0.4
NR1H3-229ENST00000527464 HEATR6Q6AI08 1181 aaKnown RBP17.56■□□□□ 0.4
NR1H3-229ENST00000527464 OR6B2Q6IFH4 312 aa17.56■□□□□ 0.4
NR1H3-229ENST00000527464 OLFML1Q6UWY5 402 aa17.56■□□□□ 0.4
NR1H3-229ENST00000527464 SLC26A9Q7LBE3 791 aa17.56■□□□□ 0.4
NR1H3-229ENST00000527464 NOP9Q86U38 636 aaKnown RBP17.56■□□□□ 0.4
NR1H3-229ENST00000527464 SFTPA1Q8IWL2 248 aa17.56■□□□□ 0.4
NR1H3-229ENST00000527464 IL17RCQ8NAC3 791 aa17.56■□□□□ 0.4
NR1H3-229ENST00000527464 ZNF397Q8NF99 534 aaPredicted RBP17.56■□□□□ 0.4
NR1H3-229ENST00000527464 DDI1Q8WTU0 396 aa17.56■□□□□ 0.4
NR1H3-229ENST00000527464 FCRL2Q96LA5 508 aaPredicted RBP17.56■□□□□ 0.4
NR1H3-229ENST00000527464 SLC2A13Q96QE2 648 aa17.56■□□□□ 0.4
NR1H3-229ENST00000527464 NLRC4Q9NPP4 1024 aa17.56■□□□□ 0.4
NR1H3-229ENST00000527464 TMEM51Q9NW97 253 aa17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms