RNA–Protein interactions for RNA: ENST00000526734.5

VPS28-206, Transcript of VPS28, ESCRT-I subunit, humanhuman

TSL 2

Gene VPS28, Length 570 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS28-206ENST00000526734 SFTPA1Q8IWL2 248 aa21.5■■□□□ 1.03
VPS28-206ENST00000526734 KIAA2013Q8IYS2 634 aa21.5■■□□□ 1.03
VPS28-206ENST00000526734 FAM71AQ8IYT1 594 aa21.5■■□□□ 1.03
VPS28-206ENST00000526734 DCLK2Q8N568 766 aa21.5■■□□□ 1.03
VPS28-206ENST00000526734 ANKRD20A12PQ8NF67 263 aa21.5■■□□□ 1.03
VPS28-206ENST00000526734 AZIN2Q96A70 460 aa21.5■■□□□ 1.03
VPS28-206ENST00000526734 FAM149B1Q96BN6 582 aa21.5■■□□□ 1.03
VPS28-206ENST00000526734 ZC3H10Q96K80 434 aaKnown RBP21.5■■□□□ 1.03
VPS28-206ENST00000526734 POLR3BQ9NW08 1133 aaPredicted RBP21.5■■□□□ 1.03
VPS28-206ENST00000526734 GFRA2O00451 464 aa21.49■■□□□ 1.03
VPS28-206ENST00000526734 PIK3R2O00459 728 aa21.49■■□□□ 1.03
VPS28-206ENST00000526734 NCAM1P13591 858 aa21.49■■□□□ 1.03
VPS28-206ENST00000526734 NTSR1P30989 418 aa21.49■■□□□ 1.03
VPS28-206ENST00000526734 KRT9P35527 623 aa21.49■■□□□ 1.03
VPS28-206ENST00000526734 SLC11A2P49281 568 aa21.49■■□□□ 1.03
VPS28-206ENST00000526734 APBA1Q02410 837 aa21.49■■□□□ 1.03
VPS28-206ENST00000526734 LMNB2Q03252 620 aa21.49■■□□□ 1.03
VPS28-206ENST00000526734 EIF4HQ15056 248 aaKnown RBP21.49■■□□□ 1.03
VPS28-206ENST00000526734 ELF2Q15723 593 aa21.49■■□□□ 1.03
VPS28-206ENST00000526734 LPAL2Q16609 132 aa21.49■■□□□ 1.03
VPS28-206ENST00000526734 EMC10Q5UCC4 262 aa21.49■■□□□ 1.03
VPS28-206ENST00000526734 SCUBE3Q8IX30 993 aa21.49■■□□□ 1.03
VPS28-206ENST00000526734 FAM160A2Q8N612 972 aaPredicted RBP21.49■■□□□ 1.03
VPS28-206ENST00000526734 ZNF557Q8N988 423 aaPredicted RBP21.49■■□□□ 1.03
VPS28-206ENST00000526734 CLEC4CQ8WTT0 213 aa21.49■■□□□ 1.03
VPS28-206ENST00000526734 DDI1Q8WTU0 396 aa21.49■■□□□ 1.03
VPS28-206ENST00000526734 UCMAQ8WVF2 138 aa21.49■■□□□ 1.03
VPS28-206ENST00000526734 DDX50Q9BQ39 737 aaKnown RBP21.49■■□□□ 1.03
VPS28-206ENST00000526734 PLCB1Q9NQ66 1216 aa21.49■■□□□ 1.03
VPS28-206ENST00000526734 ASNSD1Q9NWL6 643 aa21.49■■□□□ 1.03
VPS28-206ENST00000526734 E5RJQ4 531 aa21.48■■□□□ 1.03
VPS28-206ENST00000526734 CAPN9O14815 690 aa21.48■■□□□ 1.03
VPS28-206ENST00000526734 ZBTB24O43167 697 aaPredicted RBP21.48■■□□□ 1.03
VPS28-206ENST00000526734 IRAK2O43187 625 aa21.48■■□□□ 1.03
VPS28-206ENST00000526734 MSI1O43347 362 aaKnown RBP21.48■■□□□ 1.03
VPS28-206ENST00000526734 GLI1P08151 1106 aa21.48■■□□□ 1.03
VPS28-206ENST00000526734 HNRNPLP14866 589 aaKnown RBP eCLIP21.48■■□□□ 1.03
VPS28-206ENST00000526734 SDHBP21912 280 aa21.48■■□□□ 1.03
VPS28-206ENST00000526734 HOXC13P31276 330 aa21.48■■□□□ 1.03
VPS28-206ENST00000526734 TBX4P57082 545 aa21.48■■□□□ 1.03
VPS28-206ENST00000526734 MYL5Q02045 173 aa21.48■■□□□ 1.03
VPS28-206ENST00000526734 BYSLQ13895 437 aaKnown RBP21.48■■□□□ 1.03
VPS28-206ENST00000526734 FKBP15Q5T1M5 1219 aa21.48■■□□□ 1.03
VPS28-206ENST00000526734 MPP7Q5T2T1 576 aa21.48■■□□□ 1.03
VPS28-206ENST00000526734 KLHDC7AQ5VTJ3 777 aa21.48■■□□□ 1.03
VPS28-206ENST00000526734 ANO7Q6IWH7 933 aa21.48■■□□□ 1.03
VPS28-206ENST00000526734 TMEM92Q6UXU6 159 aa21.48■■□□□ 1.03
VPS28-206ENST00000526734 ANKS1BQ7Z6G8 1248 aa21.48■■□□□ 1.03
VPS28-206ENST00000526734 DQX1Q8TE96 717 aaKnown RBP21.48■■□□□ 1.03
VPS28-206ENST00000526734 BHMTQ93088 406 aa21.48■■□□□ 1.03
VPS28-206ENST00000526734 POPDC2Q9HBU9 364 aa21.48■■□□□ 1.03
VPS28-206ENST00000526734 ACP6Q9NPH0 428 aa21.48■■□□□ 1.03
VPS28-206ENST00000526734 PLK2Q9NYY3 685 aa21.48■■□□□ 1.03
VPS28-206ENST00000526734 TLR6Q9Y2C9 796 aa21.48■■□□□ 1.03
VPS28-206ENST00000526734 PCDHGA5Q9Y5G8 931 aa21.48■■□□□ 1.03
VPS28-206ENST00000526734 ZNF292O60281 2723 aa21.47■■□□□ 1.03
VPS28-206ENST00000526734 PRR5-ARHGAP8B1AHC4 643 aa21.47■■□□□ 1.03
VPS28-206ENST00000526734 FOXN3O00409 490 aaPredicted RBP21.47■■□□□ 1.03
VPS28-206ENST00000526734 TRIM24O15164 1050 aa21.47■■□□□ 1.03
VPS28-206ENST00000526734 PAPSS1O43252 624 aaPredicted RBP21.47■■□□□ 1.03
VPS28-206ENST00000526734 ADAM23O75077 832 aa21.47■■□□□ 1.03
VPS28-206ENST00000526734 RHOBTB1O94844 696 aa21.47■■□□□ 1.03
VPS28-206ENST00000526734 HOXB2P14652 356 aa21.47■■□□□ 1.03
VPS28-206ENST00000526734 UCHL3P15374 230 aa21.47■■□□□ 1.03
VPS28-206ENST00000526734 YWHAZP63104 245 aaKnown RBP21.47■■□□□ 1.03
VPS28-206ENST00000526734 ARHGAP8P85298 464 aa21.47■■□□□ 1.03
VPS28-206ENST00000526734 KCNMA1Q12791 1236 aa21.47■■□□□ 1.03
VPS28-206ENST00000526734 RAPGEF1Q13905 1077 aa21.47■■□□□ 1.03
VPS28-206ENST00000526734 DPY19L2P1Q6NXN4 242 aa21.47■■□□□ 1.03
VPS28-206ENST00000526734 CHPFQ8IZ52 775 aa21.47■■□□□ 1.03
VPS28-206ENST00000526734 MDGA1Q8NFP4 955 aa21.47■■□□□ 1.03
VPS28-206ENST00000526734 IPO4Q8TEX9 1081 aaKnown RBP21.47■■□□□ 1.03
VPS28-206ENST00000526734 TAB2Q9NYJ8 693 aa21.47■■□□□ 1.03
VPS28-206ENST00000526734 CYTH4Q9UIA0 394 aa21.47■■□□□ 1.03
VPS28-206ENST00000526734 AJAP1Q9UKB5 411 aaPredicted RBP21.47■■□□□ 1.03
VPS28-206ENST00000526734 USP18Q9UMW8 372 aa21.47■■□□□ 1.03
VPS28-206ENST00000526734 MYOFQ9NZM1 2061 aa21.47■■□□□ 1.03
VPS28-206ENST00000526734 PRRT4C9JH25 899 aa21.46■■□□□ 1.03
VPS28-206ENST00000526734 TIMM44O43615 452 aa21.46■■□□□ 1.03
VPS28-206ENST00000526734 EPN2O95208 641 aa21.46■■□□□ 1.03
VPS28-206ENST00000526734 FYNP06241 537 aa21.46■■□□□ 1.03
VPS28-206ENST00000526734 CLCN1P35523 988 aa21.46■■□□□ 1.03
VPS28-206ENST00000526734 DRAP1Q14919 205 aaPredicted RBP21.46■■□□□ 1.03
VPS28-206ENST00000526734 KRT31Q15323 416 aa21.46■■□□□ 1.03
VPS28-206ENST00000526734 PLK5Q496M5 336 aa21.46■■□□□ 1.03
VPS28-206ENST00000526734 EFHC1Q5JVL4 640 aa21.46■■□□□ 1.03
VPS28-206ENST00000526734 EGFLAMQ63HQ2 1017 aa21.46■■□□□ 1.03
VPS28-206ENST00000526734 TOGARAM2Q6ZUX3 1019 aa21.46■■□□□ 1.03
VPS28-206ENST00000526734 KBTBD6Q86V97 674 aa21.46■■□□□ 1.03
VPS28-206ENST00000526734 OLIG1Q8TAK6 271 aa21.46■■□□□ 1.03
VPS28-206ENST00000526734 WFIKKN2Q8TEU8 576 aa21.46■■□□□ 1.03
VPS28-206ENST00000526734 TMA16Q96EY4 203 aaKnown RBP21.46■■□□□ 1.03
VPS28-206ENST00000526734 PPP1R13BQ96KQ4 1090 aa21.46■■□□□ 1.03
VPS28-206ENST00000526734 SPACA7Q96KW9 195 aa21.46■■□□□ 1.03
VPS28-206ENST00000526734 GABRG3Q99928 467 aa21.46■■□□□ 1.03
VPS28-206ENST00000526734 LSM14BQ9BX40 385 aaKnown RBP21.46■■□□□ 1.03
VPS28-206ENST00000526734 NAA15Q9BXJ9 866 aaKnown RBP21.46■■□□□ 1.03
VPS28-206ENST00000526734 BCCIPQ9P287 314 aaKnown RBP eCLIP21.46■■□□□ 1.03
VPS28-206ENST00000526734 FHOD1Q9Y613 1164 aa21.46■■□□□ 1.03
VPS28-206ENST00000526734 ATG2BQ96BY7 2078 aa21.45■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms