RNA–Protein interactions for RNA: ENST00000526025.1

CD44-222, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2 BASIC

Gene CD44, Length 1,052 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-222ENST00000526025 RFC1P35251 1148 aaPredicted RBP21.6■■□□□ 1.05
CD44-222ENST00000526025 CYLC1P35663 651 aaPredicted RBP21.6■■□□□ 1.05
CD44-222ENST00000526025 ZXDAP98168 799 aa21.6■■□□□ 1.05
CD44-222ENST00000526025 PPP2R5DQ14738 602 aa21.6■■□□□ 1.05
CD44-222ENST00000526025 OTUD1Q5VV17 481 aaPredicted RBP21.6■■□□□ 1.05
CD44-222ENST00000526025 FAM217AQ8IXS0 508 aa21.6■■□□□ 1.05
CD44-222ENST00000526025 JOSD2Q8TAC2 188 aa21.6■■□□□ 1.05
CD44-222ENST00000526025 RXFP2Q8WXD0 754 aa21.6■■□□□ 1.05
CD44-222ENST00000526025 CENPIQ92674 756 aaPredicted RBP21.6■■□□□ 1.05
CD44-222ENST00000526025 MSANTD3Q96H12 275 aa21.6■■□□□ 1.05
CD44-222ENST00000526025 BAG1Q99933 345 aaPredicted RBP21.6■■□□□ 1.05
CD44-222ENST00000526025 SLTMQ9NWH9 1034 aaKnown RBP eCLIP21.6■■□□□ 1.05
CD44-222ENST00000526025 DDIT4Q9NX09 232 aa21.6■■□□□ 1.05
CD44-222ENST00000526025 WNT6Q9Y6F9 365 aa21.6■■□□□ 1.05
CD44-222ENST00000526025 MYOFQ9NZM1 2061 aa21.59■■□□□ 1.05
CD44-222ENST00000526025 M0QYT0 321 aa21.59■■□□□ 1.05
CD44-222ENST00000526025 KLKB1P03952 638 aa21.59■■□□□ 1.05
CD44-222ENST00000526025 H2AFZP0C0S5 128 aa21.59■■□□□ 1.05
CD44-222ENST00000526025 PDGFRAP16234 1089 aa21.59■■□□□ 1.05
CD44-222ENST00000526025 GPD1P21695 349 aa21.59■■□□□ 1.05
CD44-222ENST00000526025 SULT1E1P49888 294 aa21.59■■□□□ 1.05
CD44-222ENST00000526025 ZNF143P52747 638 aaPredicted RBP21.59■■□□□ 1.05
CD44-222ENST00000526025 GALCP54803 685 aa21.59■■□□□ 1.05
CD44-222ENST00000526025 PITX1P78337 314 aaPredicted RBP21.59■■□□□ 1.05
CD44-222ENST00000526025 DCUN1D2Q6PH85 259 aa21.59■■□□□ 1.05
CD44-222ENST00000526025 H2AFVQ71UI9 128 aa21.59■■□□□ 1.05
CD44-222ENST00000526025 STRADAQ7RTN6 431 aa21.59■■□□□ 1.05
CD44-222ENST00000526025 PHLDB2Q86SQ0 1253 aa21.59■■□□□ 1.05
CD44-222ENST00000526025 TMEM139Q8IV31 216 aa21.59■■□□□ 1.05
CD44-222ENST00000526025 BBS7Q8IWZ6 715 aa21.59■■□□□ 1.05
CD44-222ENST00000526025 CPXM2Q8N436 756 aa21.59■■□□□ 1.05
CD44-222ENST00000526025 CPA6Q8N4T0 437 aa21.59■■□□□ 1.05
CD44-222ENST00000526025 EMC1Q8N766 993 aa21.59■■□□□ 1.05
CD44-222ENST00000526025 ANP32BQ92688 251 aaKnown RBP21.59■■□□□ 1.05
CD44-222ENST00000526025 EDAQ92838 391 aa21.59■■□□□ 1.05
CD44-222ENST00000526025 WBP2Q969T9 261 aa21.59■■□□□ 1.05
CD44-222ENST00000526025 MCEEQ96PE7 176 aa21.59■■□□□ 1.05
CD44-222ENST00000526025 THAP2Q9H0W7 228 aa21.59■■□□□ 1.05
CD44-222ENST00000526025 HPS4Q9NQG7 708 aa21.59■■□□□ 1.05
CD44-222ENST00000526025 SPTLC3Q9NUV7 552 aa21.59■■□□□ 1.05
CD44-222ENST00000526025 COL4A3Q01955 1670 aa21.59■■□□□ 1.05
CD44-222ENST00000526025 F5P12259 2224 aa21.59■■□□□ 1.05
CD44-222ENST00000526025 TMEM191CA6NGB0 347 aa21.58■■□□□ 1.05
CD44-222ENST00000526025 EIF3CLB5ME19 914 aaKnown RBP21.58■■□□□ 1.05
CD44-222ENST00000526025 TNFRSF10AO00220 468 aa21.58■■□□□ 1.05
CD44-222ENST00000526025 APOEP02649 317 aa21.58■■□□□ 1.05
CD44-222ENST00000526025 HMBSP08397 361 aa21.58■■□□□ 1.05
CD44-222ENST00000526025 TMEM253P0C7T8 217 aa21.58■■□□□ 1.05
CD44-222ENST00000526025 DESP17661 470 aa21.58■■□□□ 1.05
CD44-222ENST00000526025 ABCB4P21439 1286 aa21.58■■□□□ 1.05
CD44-222ENST00000526025 CCR1P32246 355 aa21.58■■□□□ 1.05
CD44-222ENST00000526025 RDXP35241 583 aaKnown RBP21.58■■□□□ 1.05
CD44-222ENST00000526025 CHKAP35790 457 aa21.58■■□□□ 1.05
CD44-222ENST00000526025 CXCR3P49682 368 aa21.58■■□□□ 1.05
CD44-222ENST00000526025 RUNX3Q13761 415 aa21.58■■□□□ 1.05
CD44-222ENST00000526025 ITPRIPL2Q3MIP1 535 aa21.58■■□□□ 1.05
CD44-222ENST00000526025 CCDC14Q49A88 953 aa21.58■■□□□ 1.05
CD44-222ENST00000526025 BRMS1LQ5PSV4 323 aa21.58■■□□□ 1.05
CD44-222ENST00000526025 C1orf228Q6PIY5 440 aa21.58■■□□□ 1.05
CD44-222ENST00000526025 SND1Q7KZF4 910 aaKnown RBP eCLIP21.58■■□□□ 1.05
CD44-222ENST00000526025 DNAAF5Q86Y56 855 aa21.58■■□□□ 1.05
CD44-222ENST00000526025 ADGRG2Q8IZP9 1017 aa21.58■■□□□ 1.05
CD44-222ENST00000526025 ADAM32Q8TC27 787 aa21.58■■□□□ 1.05
CD44-222ENST00000526025 CSGALNACT1Q8TDX6 532 aa21.58■■□□□ 1.05
CD44-222ENST00000526025 CTNNBL1Q8WYA6 563 aaPredicted RBP21.58■■□□□ 1.05
CD44-222ENST00000526025 ZFYVE19Q96K21 471 aa21.58■■□□□ 1.05
CD44-222ENST00000526025 CFAP57Q96MR6 1250 aa21.58■■□□□ 1.05
CD44-222ENST00000526025 TBCBQ99426 244 aa21.58■■□□□ 1.05
CD44-222ENST00000526025 EIF3CQ99613 913 aaKnown RBP21.58■■□□□ 1.05
CD44-222ENST00000526025 CNPY3Q9BT09 278 aa21.58■■□□□ 1.05
CD44-222ENST00000526025 COL25A1Q9BXS0 654 aaPredicted RBP21.58■■□□□ 1.05
CD44-222ENST00000526025 LUC7LQ9NQ29 371 aaKnown RBP21.58■■□□□ 1.05
CD44-222ENST00000526025 UVRAGQ9P2Y5 699 aa21.58■■□□□ 1.05
CD44-222ENST00000526025 AGO1Q9UL18 857 aaKnown RBP21.58■■□□□ 1.05
CD44-222ENST00000526025 KCNU1A8MYU2 1149 aa21.57■■□□□ 1.04
CD44-222ENST00000526025 PI4K2BG5E9Z4 385 aa21.57■■□□□ 1.04
CD44-222ENST00000526025 ATMINO43313 823 aaPredicted RBP21.57■■□□□ 1.04
CD44-222ENST00000526025 SLC11A2P49281 568 aa21.57■■□□□ 1.04
CD44-222ENST00000526025 RPL7AP62424 266 aaKnown RBP21.57■■□□□ 1.04
CD44-222ENST00000526025 SIGLEC14Q08ET2 396 aa21.57■■□□□ 1.04
CD44-222ENST00000526025 NR1H3Q13133 447 aa21.57■■□□□ 1.04
CD44-222ENST00000526025 ACBD5Q5T8D3 534 aaPredicted RBP21.57■■□□□ 1.04
CD44-222ENST00000526025 DENND1CQ8IV53 801 aa21.57■■□□□ 1.04
CD44-222ENST00000526025 TTC16Q8NEE8 873 aa21.57■■□□□ 1.04
CD44-222ENST00000526025 CCDC112Q8NEF3 446 aa21.57■■□□□ 1.04
CD44-222ENST00000526025 BTN2A3PQ96KV6 586 aa21.57■■□□□ 1.04
CD44-222ENST00000526025 ADAM33Q9BZ11 813 aa21.57■■□□□ 1.04
CD44-222ENST00000526025 LINC00597Q9H2U6 94 aa21.57■■□□□ 1.04
CD44-222ENST00000526025 EBF3Q9H4W6 596 aa21.57■■□□□ 1.04
CD44-222ENST00000526025 C8orf33Q9H7E9 229 aaPredicted RBP21.57■■□□□ 1.04
CD44-222ENST00000526025 ECT2Q9H8V3 914 aa21.57■■□□□ 1.04
CD44-222ENST00000526025 PIGVQ9NUD9 493 aa21.57■■□□□ 1.04
CD44-222ENST00000526025 LCMT1Q9UIC8 334 aa21.57■■□□□ 1.04
CD44-222ENST00000526025 EPN1Q9Y6I3 576 aaPredicted RBP21.57■■□□□ 1.04
CD44-222ENST00000526025 TECTAO75443 2155 aa21.57■■□□□ 1.04
CD44-222ENST00000526025 CUL9Q8IWT3 2517 aa21.56■■□□□ 1.04
CD44-222ENST00000526025 NDUFA10O95299 355 aa21.56■■□□□ 1.04
CD44-222ENST00000526025 GJB6O95452 261 aa21.56■■□□□ 1.04
CD44-222ENST00000526025 ADH1CP00326 375 aa21.56■■□□□ 1.04
CD44-222ENST00000526025 AMPD2Q01433 879 aa21.56■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms