RNA–Protein interactions for RNA: ENST00000525141.1

SMCO4-202, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SMCO4, Length 889 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-202ENST00000525141 FYB2Q5VWT5 728 aa13.13□□□□□ -0.31
SMCO4-202ENST00000525141 BTBD8Q5XKL5 378 aa13.13□□□□□ -0.31
SMCO4-202ENST00000525141 ANO7Q6IWH7 933 aa13.13□□□□□ -0.31
SMCO4-202ENST00000525141 TMEM270Q6UE05 265 aa13.13□□□□□ -0.31
SMCO4-202ENST00000525141 TERB1Q8NA31 727 aa13.13□□□□□ -0.31
SMCO4-202ENST00000525141 KCNV2Q8TDN2 545 aa13.13□□□□□ -0.31
SMCO4-202ENST00000525141 VPS16Q9H269 839 aa13.13□□□□□ -0.31
SMCO4-202ENST00000525141 UBE2TQ9NPD8 197 aaPredicted RBP13.13□□□□□ -0.31
SMCO4-202ENST00000525141 APEX2Q9UBZ4 518 aa13.13□□□□□ -0.31
SMCO4-202ENST00000525141 SFMBT1Q9UHJ3 866 aa13.13□□□□□ -0.31
SMCO4-202ENST00000525141 MBD1Q9UIS9 605 aaPredicted RBP13.13□□□□□ -0.31
SMCO4-202ENST00000525141 RASAL2Q9UJF2 1139 aa13.13□□□□□ -0.31
SMCO4-202ENST00000525141 CNTN6Q9UQ52 1028 aa13.13□□□□□ -0.31
SMCO4-202ENST00000525141 PCDHB4Q9Y5E5 795 aa13.13□□□□□ -0.31
SMCO4-202ENST00000525141 NCOR2Q9Y618 2525 aa13.12□□□□□ -0.31
SMCO4-202ENST00000525141 SLC12A8A0AV02 714 aa13.12□□□□□ -0.31
SMCO4-202ENST00000525141 WASH3PC4AMC7 463 aa13.12□□□□□ -0.31
SMCO4-202ENST00000525141 GFRA2O00451 464 aa13.12□□□□□ -0.31
SMCO4-202ENST00000525141 PES1O00541 588 aaKnown RBP13.12□□□□□ -0.31
SMCO4-202ENST00000525141 SLC30A4O14863 429 aa13.12□□□□□ -0.31
SMCO4-202ENST00000525141 PENKP01210 267 aaPredicted RBP13.12□□□□□ -0.31
SMCO4-202ENST00000525141 PAEPP09466 180 aa13.12□□□□□ -0.31
SMCO4-202ENST00000525141 P2RY2P41231 377 aa13.12□□□□□ -0.31
SMCO4-202ENST00000525141 ZNF132P52740 706 aa13.12□□□□□ -0.31
SMCO4-202ENST00000525141 COPB1P53618 953 aaKnown RBP13.12□□□□□ -0.31
SMCO4-202ENST00000525141 MFAP3P55082 362 aa13.12□□□□□ -0.31
SMCO4-202ENST00000525141 COG7P83436 770 aa13.12□□□□□ -0.31
SMCO4-202ENST00000525141 BST2Q10589 180 aaKnown RBP13.12□□□□□ -0.31
SMCO4-202ENST00000525141 KCNMA1Q12791 1236 aa13.12□□□□□ -0.31
SMCO4-202ENST00000525141 TRIP4Q15650 581 aaPredicted RBP13.12□□□□□ -0.31
SMCO4-202ENST00000525141 MAP7D1Q3KQU3 841 aa13.12□□□□□ -0.31
SMCO4-202ENST00000525141 HSF5Q4G112 596 aaPredicted RBP13.12□□□□□ -0.31
SMCO4-202ENST00000525141 USP39Q53GS9 565 aaKnown RBP13.12□□□□□ -0.31
SMCO4-202ENST00000525141 EOGTQ5NDL2 527 aa13.12□□□□□ -0.31
SMCO4-202ENST00000525141 C10orf76Q5T2E6 689 aa13.12□□□□□ -0.31
SMCO4-202ENST00000525141 BSPRYQ5W0U4 402 aa13.12□□□□□ -0.31
SMCO4-202ENST00000525141 EGFLAMQ63HQ2 1017 aa13.12□□□□□ -0.31
SMCO4-202ENST00000525141 KIAA1211LQ6NV74 962 aa13.12□□□□□ -0.31
SMCO4-202ENST00000525141 SCML4Q8N228 414 aa13.12□□□□□ -0.31
SMCO4-202ENST00000525141 RBBP8NLQ8NC74 664 aaPredicted RBP13.12□□□□□ -0.31
SMCO4-202ENST00000525141 EDEM1Q92611 657 aa13.12□□□□□ -0.31
SMCO4-202ENST00000525141 BHMTQ93088 406 aa13.12□□□□□ -0.31
SMCO4-202ENST00000525141 DNAJC17Q9NVM6 304 aaKnown RBP13.12□□□□□ -0.31
SMCO4-202ENST00000525141 TAB2Q9NYJ8 693 aa13.12□□□□□ -0.31
SMCO4-202ENST00000525141 MARCH2Q9P0N8 246 aa13.12□□□□□ -0.31
SMCO4-202ENST00000525141 LSM7Q9UK45 103 aaKnown RBP13.12□□□□□ -0.31
SMCO4-202ENST00000525141 NUP205Q92621 2012 aa13.12□□□□□ -0.31
SMCO4-202ENST00000525141 LAMA1P25391 3075 aa13.11□□□□□ -0.31
SMCO4-202ENST00000525141 BCLAF3A2AJT9 711 aaKnown RBP13.11□□□□□ -0.31
SMCO4-202ENST00000525141 PIK3R2O00459 728 aa13.11□□□□□ -0.31
SMCO4-202ENST00000525141 FYNP06241 537 aa13.11□□□□□ -0.31
SMCO4-202ENST00000525141 BRD2P25440 801 aaKnown RBP13.11□□□□□ -0.31
SMCO4-202ENST00000525141 CORO1AP31146 461 aaKnown RBP13.11□□□□□ -0.31
SMCO4-202ENST00000525141 RPL34P49207 117 aaKnown RBP13.11□□□□□ -0.31
SMCO4-202ENST00000525141 RGS7P49802 495 aa13.11□□□□□ -0.31
SMCO4-202ENST00000525141 BCAT1P54687 386 aa13.11□□□□□ -0.31
SMCO4-202ENST00000525141 ADIGQ0VDE8 80 aa13.11□□□□□ -0.31
SMCO4-202ENST00000525141 FKBP15Q5T1M5 1219 aa13.11□□□□□ -0.31
SMCO4-202ENST00000525141 PMS2CLQ68D20 193 aa13.11□□□□□ -0.31
SMCO4-202ENST00000525141 GRAMD4Q6IC98 578 aa13.11□□□□□ -0.31
SMCO4-202ENST00000525141 TCEAL6Q6IPX3 200 aa13.11□□□□□ -0.31
SMCO4-202ENST00000525141 DPY19L2P1Q6NXN4 242 aa13.11□□□□□ -0.31
SMCO4-202ENST00000525141 APTXQ7Z2E3 356 aaKnown RBP13.11□□□□□ -0.31
SMCO4-202ENST00000525141 DENND1CQ8IV53 801 aa13.11□□□□□ -0.31
SMCO4-202ENST00000525141 FAM217AQ8IXS0 508 aa13.11□□□□□ -0.31
SMCO4-202ENST00000525141 ARHGAP18Q8N392 663 aa13.11□□□□□ -0.31
SMCO4-202ENST00000525141 ZNF513Q8N8E2 541 aaPredicted RBP13.11□□□□□ -0.31
SMCO4-202ENST00000525141 CLEC4CQ8WTT0 213 aa13.11□□□□□ -0.31
SMCO4-202ENST00000525141 TCEAL3Q969E4 200 aa13.11□□□□□ -0.31
SMCO4-202ENST00000525141 PIWIL1Q96J94 861 aaKnown RBP13.11□□□□□ -0.31
SMCO4-202ENST00000525141 XPO6Q96QU8 1125 aaKnown RBP13.11□□□□□ -0.31
SMCO4-202ENST00000525141 RTKNQ9BST9 563 aa13.11□□□□□ -0.31
SMCO4-202ENST00000525141 LRRC4Q9HBW1 653 aa13.11□□□□□ -0.31
SMCO4-202ENST00000525141 CBX8Q9HC52 389 aa13.11□□□□□ -0.31
SMCO4-202ENST00000525141 SIX2Q9NPC8 291 aa13.11□□□□□ -0.31
SMCO4-202ENST00000525141 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.11□□□□□ -0.31
SMCO4-202ENST00000525141 PCDHGA5Q9Y5G8 931 aa13.11□□□□□ -0.31
SMCO4-202ENST00000525141 CNOT1A5YKK6 2376 aaKnown RBP13.11□□□□□ -0.31
SMCO4-202ENST00000525141 LGALS16A8MUM7 142 aa13.1□□□□□ -0.31
SMCO4-202ENST00000525141 RHOBTB1O94844 696 aa13.1□□□□□ -0.31
SMCO4-202ENST00000525141 ATP1A3P13637 1013 aa13.1□□□□□ -0.31
SMCO4-202ENST00000525141 LCP1P13796 627 aa13.1□□□□□ -0.31
SMCO4-202ENST00000525141 GABRG2P18507 467 aa13.1□□□□□ -0.31
SMCO4-202ENST00000525141 SDHBP21912 280 aa13.1□□□□□ -0.31
SMCO4-202ENST00000525141 NTSR1P30989 418 aa13.1□□□□□ -0.31
SMCO4-202ENST00000525141 MPLP40238 635 aa13.1□□□□□ -0.31
SMCO4-202ENST00000525141 GPD2P43304 727 aa13.1□□□□□ -0.31
SMCO4-202ENST00000525141 DGKGP49619 791 aa13.1□□□□□ -0.31
SMCO4-202ENST00000525141 DAOAP59103 153 aa13.1□□□□□ -0.31
SMCO4-202ENST00000525141 APBA1Q02410 837 aa13.1□□□□□ -0.31
SMCO4-202ENST00000525141 GOLGA8FQ08AF8 430 aa13.1□□□□□ -0.31
SMCO4-202ENST00000525141 GOLGA8DPQ0D2H9 430 aa13.1□□□□□ -0.31
SMCO4-202ENST00000525141 GEN1Q17RS7 908 aa13.1□□□□□ -0.31
SMCO4-202ENST00000525141 TMEM215Q68D42 235 aa13.1□□□□□ -0.31
SMCO4-202ENST00000525141 GJB7Q6PEY0 223 aa13.1□□□□□ -0.31
SMCO4-202ENST00000525141 LRSAM1Q6UWE0 723 aa13.1□□□□□ -0.31
SMCO4-202ENST00000525141 TADA2BQ86TJ2 420 aa13.1□□□□□ -0.31
SMCO4-202ENST00000525141 FMNL3Q8IVF7 1028 aa13.1□□□□□ -0.31
SMCO4-202ENST00000525141 NETO1Q8TDF5 533 aa13.1□□□□□ -0.31
SMCO4-202ENST00000525141 ERLEC1Q96DZ1 483 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms