RNA–Protein interactions for RNA: ENST00000524162.5

TRAPPC9-215, Transcript of trafficking protein particle complex 9, humanhuman

TSL 4

Gene TRAPPC9, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-215ENST00000524162 C1orf131Q8NDD1 294 aaKnown RBP21.79■■□□□ 1.08
TRAPPC9-215ENST00000524162 DDX1Q92499 740 aaKnown RBP21.79■■□□□ 1.08
TRAPPC9-215ENST00000524162 CPXM1Q96SM3 734 aa21.79■■□□□ 1.08
TRAPPC9-215ENST00000524162 SLC2A11Q9BYW1 496 aa21.79■■□□□ 1.08
TRAPPC9-215ENST00000524162 EPC1Q9H2F5 836 aa21.79■■□□□ 1.08
TRAPPC9-215ENST00000524162 TLR6Q9Y2C9 796 aa21.79■■□□□ 1.08
TRAPPC9-215ENST00000524162 SLC27A6Q9Y2P4 619 aa21.79■■□□□ 1.08
TRAPPC9-215ENST00000524162 CFAP54Q96N23 3096 aa21.78■■□□□ 1.08
TRAPPC9-215ENST00000524162 NEDD8-MDP1E9PL57 170 aa21.78■■□□□ 1.08
TRAPPC9-215ENST00000524162 LMNAP02545 664 aaKnown RBP21.78■■□□□ 1.08
TRAPPC9-215ENST00000524162 NCAM1P13591 858 aa21.78■■□□□ 1.08
TRAPPC9-215ENST00000524162 SCNN1AP37088 669 aa21.78■■□□□ 1.08
TRAPPC9-215ENST00000524162 KIR2DL1P43626 348 aaPredicted RBP21.78■■□□□ 1.08
TRAPPC9-215ENST00000524162 SYCP1Q15431 976 aa21.78■■□□□ 1.08
TRAPPC9-215ENST00000524162 MPP7Q5T2T1 576 aa21.78■■□□□ 1.08
TRAPPC9-215ENST00000524162 FYB2Q5VWT5 728 aa21.78■■□□□ 1.08
TRAPPC9-215ENST00000524162 PKN3Q6P5Z2 889 aa21.78■■□□□ 1.08
TRAPPC9-215ENST00000524162 TSSK4Q6SA08 328 aa21.78■■□□□ 1.08
TRAPPC9-215ENST00000524162 ALYREFQ86V81 257 aaKnown RBP21.78■■□□□ 1.08
TRAPPC9-215ENST00000524162 ZNF397Q8NF99 534 aaPredicted RBP21.78■■□□□ 1.08
TRAPPC9-215ENST00000524162 RPLP0P6Q8NHW5 317 aa21.78■■□□□ 1.08
TRAPPC9-215ENST00000524162 EPS8L1Q8TE68 723 aa21.78■■□□□ 1.08
TRAPPC9-215ENST00000524162 FAM149B1Q96BN6 582 aa21.78■■□□□ 1.08
TRAPPC9-215ENST00000524162 EBF1Q9UH73 591 aa21.78■■□□□ 1.08
TRAPPC9-215ENST00000524162 SFMBT1Q9UHJ3 866 aa21.78■■□□□ 1.08
TRAPPC9-215ENST00000524162 MMP17Q9ULZ9 603 aa21.78■■□□□ 1.08
TRAPPC9-215ENST00000524162 SLC8A2Q9UPR5 921 aa21.78■■□□□ 1.08
TRAPPC9-215ENST00000524162 R4GN57 208 aa21.78■■□□□ 1.08
TRAPPC9-215ENST00000524162 EML5Q05BV3 1969 aa21.78■■□□□ 1.08
TRAPPC9-215ENST00000524162 PIK3R2O00459 728 aa21.77■■□□□ 1.08
TRAPPC9-215ENST00000524162 IRAK2O43187 625 aa21.77■■□□□ 1.08
TRAPPC9-215ENST00000524162 HSF2BPO75031 334 aa21.77■■□□□ 1.08
TRAPPC9-215ENST00000524162 IGLV3-25P01717 112 aa21.77■■□□□ 1.08
TRAPPC9-215ENST00000524162 CYBBP04839 570 aa21.77■■□□□ 1.08
TRAPPC9-215ENST00000524162 GABRB2P47870 512 aa21.77■■□□□ 1.08
TRAPPC9-215ENST00000524162 UBXN1Q04323 297 aa21.77■■□□□ 1.08
TRAPPC9-215ENST00000524162 MTA1Q13330 715 aa21.77■■□□□ 1.08
TRAPPC9-215ENST00000524162 EIF4EBP2Q13542 120 aaPredicted RBP21.77■■□□□ 1.08
TRAPPC9-215ENST00000524162 E2F5Q15329 346 aa21.77■■□□□ 1.08
TRAPPC9-215ENST00000524162 MPPE1Q53F39 396 aa21.77■■□□□ 1.08
TRAPPC9-215ENST00000524162 RNF43Q68DV7 783 aa21.77■■□□□ 1.08
TRAPPC9-215ENST00000524162 GRAMD4Q6IC98 578 aa21.77■■□□□ 1.08
TRAPPC9-215ENST00000524162 TOGARAM2Q6ZUX3 1019 aa21.77■■□□□ 1.08
TRAPPC9-215ENST00000524162 TRMT11Q7Z4G4 463 aaKnown RBP21.77■■□□□ 1.08
TRAPPC9-215ENST00000524162 WDR5BQ86VZ2 330 aa21.77■■□□□ 1.08
TRAPPC9-215ENST00000524162 DQX1Q8TE96 717 aaKnown RBP21.77■■□□□ 1.08
TRAPPC9-215ENST00000524162 IPO4Q8TEX9 1081 aaKnown RBP21.77■■□□□ 1.08
TRAPPC9-215ENST00000524162 SLC39A13Q96H72 371 aa21.77■■□□□ 1.08
TRAPPC9-215ENST00000524162 FAM207AQ9NSI2 230 aaPredicted RBP21.77■■□□□ 1.08
TRAPPC9-215ENST00000524162 C2orf42Q9NWW7 574 aa21.77■■□□□ 1.08
TRAPPC9-215ENST00000524162 GFRA3O60609 400 aa21.76■■□□□ 1.07
TRAPPC9-215ENST00000524162 HMBSP08397 361 aa21.76■■□□□ 1.07
TRAPPC9-215ENST00000524162 CISD3P0C7P0 127 aa21.76■■□□□ 1.07
TRAPPC9-215ENST00000524162 PNMA6AP0CW24 399 aaPredicted RBP21.76■■□□□ 1.07
TRAPPC9-215ENST00000524162 ATP1A3P13637 1013 aa21.76■■□□□ 1.07
TRAPPC9-215ENST00000524162 SOX5P35711 763 aa21.76■■□□□ 1.07
TRAPPC9-215ENST00000524162 SLC11A2P49281 568 aa21.76■■□□□ 1.07
TRAPPC9-215ENST00000524162 TBX4P57082 545 aa21.76■■□□□ 1.07
TRAPPC9-215ENST00000524162 POLR2FP61218 127 aaKnown RBP21.76■■□□□ 1.07
TRAPPC9-215ENST00000524162 MESP2Q0VG99 397 aa21.76■■□□□ 1.07
TRAPPC9-215ENST00000524162 IQCB1Q15051 598 aa21.76■■□□□ 1.07
TRAPPC9-215ENST00000524162 TPGS1Q6ZTW0 290 aa21.76■■□□□ 1.07
TRAPPC9-215ENST00000524162 SLC26A9Q7LBE3 791 aa21.76■■□□□ 1.07
TRAPPC9-215ENST00000524162 SUMF1Q8NBK3 374 aa21.76■■□□□ 1.07
TRAPPC9-215ENST00000524162 NEK11Q8NG66 645 aa21.76■■□□□ 1.07
TRAPPC9-215ENST00000524162 SLC2A13Q96QE2 648 aa21.76■■□□□ 1.07
TRAPPC9-215ENST00000524162 DDX50Q9BQ39 737 aaKnown RBP21.76■■□□□ 1.07
TRAPPC9-215ENST00000524162 RTN4Q9NQC3 1192 aaKnown RBP21.76■■□□□ 1.07
TRAPPC9-215ENST00000524162 DNAJC17Q9NVM6 304 aaKnown RBP21.76■■□□□ 1.07
TRAPPC9-215ENST00000524162 TBC1D3BA6NDS4 549 aa21.75■■□□□ 1.07
TRAPPC9-215ENST00000524162 CAPN9O14815 690 aa21.75■■□□□ 1.07
TRAPPC9-215ENST00000524162 NPC1O15118 1278 aa21.75■■□□□ 1.07
TRAPPC9-215ENST00000524162 STAT1P42224 750 aa21.75■■□□□ 1.07
TRAPPC9-215ENST00000524162 DGKGP49619 791 aa21.75■■□□□ 1.07
TRAPPC9-215ENST00000524162 DMC1Q14565 340 aa21.75■■□□□ 1.07
TRAPPC9-215ENST00000524162 PTPN20Q4JDL3 420 aa21.75■■□□□ 1.07
TRAPPC9-215ENST00000524162 OLFML1Q6UWY5 402 aa21.75■■□□□ 1.07
TRAPPC9-215ENST00000524162 ASCL5Q7RTU5 278 aa21.75■■□□□ 1.07
TRAPPC9-215ENST00000524162 PASD1Q8IV76 773 aa21.75■■□□□ 1.07
TRAPPC9-215ENST00000524162 NAT16Q8N8M0 369 aa21.75■■□□□ 1.07
TRAPPC9-215ENST00000524162 ZNF557Q8N988 423 aaPredicted RBP21.75■■□□□ 1.07
TRAPPC9-215ENST00000524162 MSANTD4Q8NCY6 345 aa21.75■■□□□ 1.07
TRAPPC9-215ENST00000524162 SPAG5Q96R06 1193 aa21.75■■□□□ 1.07
TRAPPC9-215ENST00000524162 RRN3Q9NYV6 651 aa21.75■■□□□ 1.07
TRAPPC9-215ENST00000524162 NOCTQ9UK39 431 aaKnown RBP21.75■■□□□ 1.07
TRAPPC9-215ENST00000524162 MYO6Q9UM54 1294 aa21.75■■□□□ 1.07
TRAPPC9-215ENST00000524162 NAALADL1Q9UQQ1 740 aa21.75■■□□□ 1.07
TRAPPC9-215ENST00000524162 EPHB6O15197 1021 aa21.74■■□□□ 1.07
TRAPPC9-215ENST00000524162 MSI1O43347 362 aaKnown RBP21.74■■□□□ 1.07
TRAPPC9-215ENST00000524162 APBB3O95704 486 aa21.74■■□□□ 1.07
TRAPPC9-215ENST00000524162 KLK7P49862 253 aa21.74■■□□□ 1.07
TRAPPC9-215ENST00000524162 DGKEP52429 567 aa21.74■■□□□ 1.07
TRAPPC9-215ENST00000524162 CDR2Q01850 454 aa21.74■■□□□ 1.07
TRAPPC9-215ENST00000524162 SLC6A3Q01959 620 aa21.74■■□□□ 1.07
TRAPPC9-215ENST00000524162 EOGTQ5NDL2 527 aa21.74■■□□□ 1.07
TRAPPC9-215ENST00000524162 SYPL2Q5VXT5 272 aa21.74■■□□□ 1.07
TRAPPC9-215ENST00000524162 TRIM72Q6ZMU5 477 aa21.74■■□□□ 1.07
TRAPPC9-215ENST00000524162 ARCQ7LC44 396 aa21.74■■□□□ 1.07
TRAPPC9-215ENST00000524162 NOP9Q86U38 636 aaKnown RBP21.74■■□□□ 1.07
TRAPPC9-215ENST00000524162 IL17RCQ8NAC3 791 aa21.74■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms