RNA–Protein interactions for RNA: ENST00000524006.5

SPIDR-222, Transcript of scaffold protein involved in DNA repair, human

TSL 5

Gene SPIDR, Length 970 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPIDR-222	ENST00000524006	BMP8B	P34820	402 aa		11.15	□□□□□ -0.62
SPIDR-222	ENST00000524006	MSH2	P43246	934 aa		11.15	□□□□□ -0.62
SPIDR-222	ENST00000524006	RPL34	P49207	117 aa	Known RBP	11.15	□□□□□ -0.62
SPIDR-222	ENST00000524006	ACLY	P53396	1101 aa		11.15	□□□□□ -0.62
SPIDR-222	ENST00000524006	SEC24C	P53992	1094 aa		11.15	□□□□□ -0.62
SPIDR-222	ENST00000524006	IL9R	Q01113	521 aa		11.15	□□□□□ -0.62
SPIDR-222	ENST00000524006	PDK1	Q15118	436 aa		11.15	□□□□□ -0.62
SPIDR-222	ENST00000524006	CA9	Q16790	459 aa		11.15	□□□□□ -0.62
SPIDR-222	ENST00000524006	INTS6L	Q5JSJ4	861 aa	Known RBP	11.15	□□□□□ -0.62
SPIDR-222	ENST00000524006	AGMO	Q6ZNB7	445 aa		11.15	□□□□□ -0.62
SPIDR-222	ENST00000524006	CCDC121	Q6ZUS5	278 aa		11.15	□□□□□ -0.62
SPIDR-222	ENST00000524006	CYP4V2	Q6ZWL3	525 aa	Predicted RBP	11.15	□□□□□ -0.62
SPIDR-222	ENST00000524006	SPATA2L	Q8IUW3	424 aa	Predicted RBP	11.15	□□□□□ -0.62
SPIDR-222	ENST00000524006	ABI1	Q8IZP0	508 aa		11.15	□□□□□ -0.62
SPIDR-222	ENST00000524006	OTUD6B	Q8N6M0	293 aa		11.15	□□□□□ -0.62
SPIDR-222	ENST00000524006	CCDC185	Q8N715	623 aa		11.15	□□□□□ -0.62
SPIDR-222	ENST00000524006	NAT8L	Q8N9F0	302 aa		11.15	□□□□□ -0.62
SPIDR-222	ENST00000524006	FBXO36	Q8NEA4	188 aa		11.15	□□□□□ -0.62
SPIDR-222	ENST00000524006	KLHDC9	Q8NEP7	349 aa		11.15	□□□□□ -0.62
SPIDR-222	ENST00000524006	PCDH19	Q8TAB3	1148 aa		11.15	□□□□□ -0.62
SPIDR-222	ENST00000524006	MDM1	Q8TC05	714 aa		11.15	□□□□□ -0.62
SPIDR-222	ENST00000524006	RNF139	Q8WU17	664 aa		11.15	□□□□□ -0.62
SPIDR-222	ENST00000524006	CENPI	Q92674	756 aa	Predicted RBP	11.15	□□□□□ -0.62
SPIDR-222	ENST00000524006	MRRF	Q96E11	262 aa	Known RBP	11.15	□□□□□ -0.62
SPIDR-222	ENST00000524006	CFAP36	Q96G28	342 aa		11.15	□□□□□ -0.62
SPIDR-222	ENST00000524006	CSPG4P5	Q96PW8	444 aa		11.15	□□□□□ -0.62
SPIDR-222	ENST00000524006	EPAS1	Q99814	870 aa		11.15	□□□□□ -0.62
SPIDR-222	ENST00000524006	TRABD	Q9H4I3	376 aa		11.15	□□□□□ -0.62
SPIDR-222	ENST00000524006	AGO3	Q9H9G7	860 aa	Known RBP	11.15	□□□□□ -0.62
SPIDR-222	ENST00000524006	CRTAC1	Q9NQ79	661 aa		11.15	□□□□□ -0.62
SPIDR-222	ENST00000524006	CACNG4	Q9UBN1	327 aa		11.15	□□□□□ -0.62
SPIDR-222	ENST00000524006	CTNNAL1	Q9UBT7	734 aa		11.15	□□□□□ -0.62
SPIDR-222	ENST00000524006	FZD10	Q9ULW2	581 aa		11.15	□□□□□ -0.62
SPIDR-222	ENST00000524006	SMG5	Q9UPR3	1016 aa	Known RBP	11.15	□□□□□ -0.62
SPIDR-222	ENST00000524006	CHMP2B	Q9UQN3	213 aa		11.15	□□□□□ -0.62
SPIDR-222	ENST00000524006	TIMM13	Q9Y5L4	95 aa	Predicted RBP	11.15	□□□□□ -0.62
SPIDR-222	ENST00000524006	SF3B1	O75533	1304 aa	Known RBP eCLIP	11.14	□□□□□ -0.63	3e-8	■■■■■ 109.8
SPIDR-222	ENST00000524006		A0A0U1RQF3	1178 aa		11.14	□□□□□ -0.63
SPIDR-222	ENST00000524006	IQANK1	A0A1B0GTG1	560 aa		11.14	□□□□□ -0.63
SPIDR-222	ENST00000524006	MEIS3P2	A8K0S8	358 aa		11.14	□□□□□ -0.63
SPIDR-222	ENST00000524006	TP73	O15350	636 aa		11.14	□□□□□ -0.63
SPIDR-222	ENST00000524006	F9	P00740	461 aa		11.14	□□□□□ -0.63
SPIDR-222	ENST00000524006	INHBA	P08476	426 aa		11.14	□□□□□ -0.63
SPIDR-222	ENST00000524006	NCAM1	P13591	858 aa		11.14	□□□□□ -0.63
SPIDR-222	ENST00000524006	RBL1	P28749	1068 aa		11.14	□□□□□ -0.63
SPIDR-222	ENST00000524006	SERPINB6	P35237	376 aa		11.14	□□□□□ -0.63
SPIDR-222	ENST00000524006	FDFT1	P37268	417 aa		11.14	□□□□□ -0.63
SPIDR-222	ENST00000524006	ZNF135	P52742	658 aa	Predicted RBP	11.14	□□□□□ -0.63
SPIDR-222	ENST00000524006	DAOA	P59103	153 aa		11.14	□□□□□ -0.63
SPIDR-222	ENST00000524006	UPP1	Q16831	310 aa		11.14	□□□□□ -0.63
SPIDR-222	ENST00000524006	PAN2	Q504Q3	1202 aa	Known RBP	11.14	□□□□□ -0.63
SPIDR-222	ENST00000524006	RAB6C	Q53S08	254 aa		11.14	□□□□□ -0.63
SPIDR-222	ENST00000524006	FAM26D	Q5JW98	314 aa		11.14	□□□□□ -0.63
SPIDR-222	ENST00000524006	UBAP2	Q5T6F2	1119 aa	Known RBP	11.14	□□□□□ -0.63
SPIDR-222	ENST00000524006	ANKRD22	Q5VYY1	191 aa		11.14	□□□□□ -0.63
SPIDR-222	ENST00000524006	SRL	Q86TD4	932 aa		11.14	□□□□□ -0.63
SPIDR-222	ENST00000524006	ECHDC2	Q86YB7	292 aa		11.14	□□□□□ -0.63
SPIDR-222	ENST00000524006	TDRP	Q86YL5	185 aa		11.14	□□□□□ -0.63
SPIDR-222	ENST00000524006	PQLC3	Q8N755	202 aa		11.14	□□□□□ -0.63
SPIDR-222	ENST00000524006	CCDC197	Q8NCU1	140 aa		11.14	□□□□□ -0.63
SPIDR-222	ENST00000524006	HASPIN	Q8TF76	798 aa		11.14	□□□□□ -0.63
SPIDR-222	ENST00000524006	IRGQ	Q8WZA9	623 aa		11.14	□□□□□ -0.63
SPIDR-222	ENST00000524006	PCED1B	Q96HM7	432 aa		11.14	□□□□□ -0.63
SPIDR-222	ENST00000524006	SGSM3	Q96HU1	749 aa		11.14	□□□□□ -0.63
SPIDR-222	ENST00000524006	CABS1	Q96KC9	395 aa		11.14	□□□□□ -0.63
SPIDR-222	ENST00000524006	SLC2A13	Q96QE2	648 aa		11.14	□□□□□ -0.63
SPIDR-222	ENST00000524006	CYTH2	Q99418	400 aa		11.14	□□□□□ -0.63
SPIDR-222	ENST00000524006	PRMT1	Q99873	361 aa	Known RBP	11.14	□□□□□ -0.63
SPIDR-222	ENST00000524006	PAIP2	Q9BPZ3	127 aa	Known RBP	11.14	□□□□□ -0.63
SPIDR-222	ENST00000524006	TSEN34	Q9BSV6	310 aa	Known RBP	11.14	□□□□□ -0.63
SPIDR-222	ENST00000524006	RAB6C	Q9H0N0	254 aa		11.14	□□□□□ -0.63
SPIDR-222	ENST00000524006	C11orf49	Q9H6J7	331 aa		11.14	□□□□□ -0.63
SPIDR-222	ENST00000524006	XAB2	Q9HCS7	855 aa	Known RBP	11.14	□□□□□ -0.63
SPIDR-222	ENST00000524006	STARD7	Q9NQZ5	370 aa		11.14	□□□□□ -0.63
SPIDR-222	ENST00000524006	TRMT13	Q9NUP7	481 aa	Known RBP	11.14	□□□□□ -0.63
SPIDR-222	ENST00000524006	ETNK2	Q9NVF9	386 aa		11.14	□□□□□ -0.63
SPIDR-222	ENST00000524006	DDIT4	Q9NX09	232 aa		11.14	□□□□□ -0.63
SPIDR-222	ENST00000524006	SEPT10	Q9P0V9	454 aa		11.14	□□□□□ -0.63
SPIDR-222	ENST00000524006	FETUB	Q9UGM5	382 aa		11.14	□□□□□ -0.63
SPIDR-222	ENST00000524006	PRDM4	Q9UKN5	801 aa		11.14	□□□□□ -0.63
SPIDR-222	ENST00000524006	NAALADL1	Q9UQQ1	740 aa		11.14	□□□□□ -0.63
SPIDR-222	ENST00000524006	RAD54B	Q9Y620	910 aa		11.14	□□□□□ -0.63
SPIDR-222	ENST00000524006	VWA8	A3KMH1	1905 aa		11.13	□□□□□ -0.63
SPIDR-222	ENST00000524006	FAM47DP	A6NHR8	397 aa		11.13	□□□□□ -0.63
SPIDR-222	ENST00000524006		I3L4J1	428 aa		11.13	□□□□□ -0.63
SPIDR-222	ENST00000524006	TMEM63A	O94886	807 aa		11.13	□□□□□ -0.63
SPIDR-222	ENST00000524006	APRT	P07741	180 aa		11.13	□□□□□ -0.63
SPIDR-222	ENST00000524006	GSTA2	P09210	222 aa		11.13	□□□□□ -0.63
SPIDR-222	ENST00000524006	COL6A1	P12109	1028 aa		11.13	□□□□□ -0.63
SPIDR-222	ENST00000524006	GOT1	P17174	413 aa		11.13	□□□□□ -0.63
SPIDR-222	ENST00000524006	SYN1	P17600	705 aa		11.13	□□□□□ -0.63
SPIDR-222	ENST00000524006	TFE3	P19532	575 aa	Predicted RBP	11.13	□□□□□ -0.63
SPIDR-222	ENST00000524006	TYMP	P19971	482 aa		11.13	□□□□□ -0.63
SPIDR-222	ENST00000524006	AMPD1	P23109	780 aa		11.13	□□□□□ -0.63
SPIDR-222	ENST00000524006	MAGEA10	P43363	369 aa	Predicted RBP	11.13	□□□□□ -0.63
SPIDR-222	ENST00000524006	ADCY1	Q08828	1119 aa		11.13	□□□□□ -0.63
SPIDR-222	ENST00000524006	AP1B1	Q10567	949 aa		11.13	□□□□□ -0.63
SPIDR-222	ENST00000524006	IFRD2	Q12894	506 aa	Predicted RBP	11.13	□□□□□ -0.63
SPIDR-222	ENST00000524006	SPARCL1	Q14515	664 aa		11.13	□□□□□ -0.63
SPIDR-222	ENST00000524006	DSC3	Q14574	896 aa		11.13	□□□□□ -0.63

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