RNA–Protein interactions for RNA: ENST00000523961.5

CCNC-216, Transcript of cyclin C, humanhuman

TSL 5

Gene CCNC, Length 1,152 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNC-216ENST00000523961 TLR6Q9Y2C9 796 aa13.05□□□□□ -0.32
CCNC-216ENST00000523961 ARIH1Q9Y4X5 557 aaPredicted RBP13.05□□□□□ -0.32
CCNC-216ENST00000523961 MIA3Q5JRA6 1907 aa13.05□□□□□ -0.32
CCNC-216ENST00000523961 IRAK2O43187 625 aa13.04□□□□□ -0.32
CCNC-216ENST00000523961 DAB1O75553 588 aa13.04□□□□□ -0.32
CCNC-216ENST00000523961 GRAP2O75791 330 aa13.04□□□□□ -0.32
CCNC-216ENST00000523961 TRUB2O95900 331 aaKnown RBP13.04□□□□□ -0.32
CCNC-216ENST00000523961 CYBBP04839 570 aa13.04□□□□□ -0.32
CCNC-216ENST00000523961 UNGP13051 313 aaPredicted RBP13.04□□□□□ -0.32
CCNC-216ENST00000523961 TNFAIP3P21580 790 aa13.04□□□□□ -0.32
CCNC-216ENST00000523961 MMP8P22894 467 aa13.04□□□□□ -0.32
CCNC-216ENST00000523961 GBP1P32455 592 aa13.04□□□□□ -0.32
CCNC-216ENST00000523961 NOS2P35228 1153 aa13.04□□□□□ -0.32
CCNC-216ENST00000523961 PRKCIP41743 596 aa13.04□□□□□ -0.32
CCNC-216ENST00000523961 NSFP46459 744 aaKnown RBP13.04□□□□□ -0.32
CCNC-216ENST00000523961 SLC11A2P49281 568 aa13.04□□□□□ -0.32
CCNC-216ENST00000523961 CENPCQ03188 943 aa13.04□□□□□ -0.32
CCNC-216ENST00000523961 CLEC16AQ2KHT3 1053 aa13.04□□□□□ -0.32
CCNC-216ENST00000523961 PREPLQ4J6C6 727 aaPredicted RBP13.04□□□□□ -0.32
CCNC-216ENST00000523961 FAM102AQ5T9C2 384 aaPredicted RBP13.04□□□□□ -0.32
CCNC-216ENST00000523961 NAIF1Q69YI7 327 aaPredicted RBP13.04□□□□□ -0.32
CCNC-216ENST00000523961 MMS22LQ6ZRQ5 1243 aa13.04□□□□□ -0.32
CCNC-216ENST00000523961 TPGS1Q6ZTW0 290 aa13.04□□□□□ -0.32
CCNC-216ENST00000523961 C1orf210Q8IVY1 113 aa13.04□□□□□ -0.32
CCNC-216ENST00000523961 ETFBKMTQ8IXQ9 262 aa13.04□□□□□ -0.32
CCNC-216ENST00000523961 FAM217AQ8IXS0 508 aa13.04□□□□□ -0.32
CCNC-216ENST00000523961 CCDC26Q8TAB7 109 aa13.04□□□□□ -0.32
CCNC-216ENST00000523961 ADAM32Q8TC27 787 aa13.04□□□□□ -0.32
CCNC-216ENST00000523961 AZIN2Q96A70 460 aa13.04□□□□□ -0.32
CCNC-216ENST00000523961 XPO6Q96QU8 1125 aaKnown RBP13.04□□□□□ -0.32
CCNC-216ENST00000523961 PNKPQ96T60 521 aa13.04□□□□□ -0.32
CCNC-216ENST00000523961 IRF2BPLQ9H1B7 796 aa13.04□□□□□ -0.32
CCNC-216ENST00000523961 FBRSL1Q9HCM7 1045 aaKnown RBP13.04□□□□□ -0.32
CCNC-216ENST00000523961 RBM12Q9NTZ6 932 aaKnown RBP13.04□□□□□ -0.32
CCNC-216ENST00000523961 SPATA6Q9NWH7 488 aaPredicted RBP13.04□□□□□ -0.32
CCNC-216ENST00000523961 RRN3Q9NYV6 651 aa13.04□□□□□ -0.32
CCNC-216ENST00000523961 DEC1Q9P2X7 70 aa13.04□□□□□ -0.32
CCNC-216ENST00000523961 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.04□□□□□ -0.32
CCNC-216ENST00000523961 ITIH6Q6UXX5 1313 aa13.04□□□□□ -0.32
CCNC-216ENST00000523961 FAM170AA1A519 330 aa13.03□□□□□ -0.32
CCNC-216ENST00000523961 NEDD8-MDP1E9PL57 170 aa13.03□□□□□ -0.32
CCNC-216ENST00000523961 GOLGA8SH3BPF8 625 aa13.03□□□□□ -0.32
CCNC-216ENST00000523961 LAMTOR5O43504 91 aa13.03□□□□□ -0.32
CCNC-216ENST00000523961 CACNG3O60359 315 aa13.03□□□□□ -0.32
CCNC-216ENST00000523961 EGFP01133 1207 aa13.03□□□□□ -0.32
CCNC-216ENST00000523961 IGLV3-25P01717 112 aa13.03□□□□□ -0.32
CCNC-216ENST00000523961 APOEP02649 317 aa13.03□□□□□ -0.32
CCNC-216ENST00000523961 APODP05090 189 aa13.03□□□□□ -0.32
CCNC-216ENST00000523961 CALB1P05937 261 aa13.03□□□□□ -0.32
CCNC-216ENST00000523961 TYRP14679 529 aa13.03□□□□□ -0.32
CCNC-216ENST00000523961 MATKP42679 507 aa13.03□□□□□ -0.32
CCNC-216ENST00000523961 SLC6A11P48066 632 aa13.03□□□□□ -0.32
CCNC-216ENST00000523961 PTPN5P54829 565 aa13.03□□□□□ -0.32
CCNC-216ENST00000523961 RNASE9P60153 205 aaKnown RBP13.03□□□□□ -0.32
CCNC-216ENST00000523961 ZBED6P86452 979 aa13.03□□□□□ -0.32
CCNC-216ENST00000523961 KLHL30Q0D2K2 578 aa13.03□□□□□ -0.32
CCNC-216ENST00000523961 C2CD6Q53TS8 623 aa13.03□□□□□ -0.32
CCNC-216ENST00000523961 ADGRF1Q5T601 910 aa13.03□□□□□ -0.32
CCNC-216ENST00000523961 PPP1R2P3Q6NXS1 205 aa13.03□□□□□ -0.32
CCNC-216ENST00000523961 MAMSTRQ6ZN01 415 aa13.03□□□□□ -0.32
CCNC-216ENST00000523961 NUDT18Q6ZVK8 323 aa13.03□□□□□ -0.32
CCNC-216ENST00000523961 ARCQ7LC44 396 aa13.03□□□□□ -0.32
CCNC-216ENST00000523961 C12orf40Q86WS4 652 aa13.03□□□□□ -0.32
CCNC-216ENST00000523961 PHF13Q86YI8 300 aaPredicted RBP13.03□□□□□ -0.32
CCNC-216ENST00000523961 NAT16Q8N8M0 369 aa13.03□□□□□ -0.32
CCNC-216ENST00000523961 PRSS33Q8NF86 280 aa13.03□□□□□ -0.32
CCNC-216ENST00000523961 SLC30A5Q8TAD4 765 aa13.03□□□□□ -0.32
CCNC-216ENST00000523961 SYN2Q92777 582 aaPredicted RBP13.03□□□□□ -0.32
CCNC-216ENST00000523961 SLC39A13Q96H72 371 aa13.03□□□□□ -0.32
CCNC-216ENST00000523961 FCRL2Q96LA5 508 aaPredicted RBP13.03□□□□□ -0.32
CCNC-216ENST00000523961 DDX50Q9BQ39 737 aaKnown RBP13.03□□□□□ -0.32
CCNC-216ENST00000523961 C11orf70Q9BRQ4 267 aa13.03□□□□□ -0.32
CCNC-216ENST00000523961 SYT11Q9BT88 431 aa13.03□□□□□ -0.32
CCNC-216ENST00000523961 HAUS4Q9H6D7 363 aa13.03□□□□□ -0.32
CCNC-216ENST00000523961 FAM204AQ9H8W3 233 aa13.03□□□□□ -0.32
CCNC-216ENST00000523961 ARHGEF4Q9NR80 690 aa13.03□□□□□ -0.32
CCNC-216ENST00000523961 TMEM51Q9NW97 253 aa13.03□□□□□ -0.32
CCNC-216ENST00000523961 DDIT4Q9NX09 232 aa13.03□□□□□ -0.32
CCNC-216ENST00000523961 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.03□□□□□ -0.32
CCNC-216ENST00000523961 ADAM22Q9P0K1 906 aa13.03□□□□□ -0.32
CCNC-216ENST00000523961 STOML2Q9UJZ1 356 aa13.03□□□□□ -0.32
CCNC-216ENST00000523961 STAP1Q9ULZ2 295 aa13.03□□□□□ -0.32
CCNC-216ENST00000523961 CAPN11Q9UMQ6 739 aa13.03□□□□□ -0.32
CCNC-216ENST00000523961 LUC7L2Q9Y383 392 aaKnown RBP13.03□□□□□ -0.32
CCNC-216ENST00000523961 MYOFQ9NZM1 2061 aa13.02□□□□□ -0.33
CCNC-216ENST00000523961 ACSL4O60488 711 aa13.02□□□□□ -0.33
CCNC-216ENST00000523961 TULP3O75386 442 aa13.02□□□□□ -0.33
CCNC-216ENST00000523961 PENKP01210 267 aaPredicted RBP13.02□□□□□ -0.33
CCNC-216ENST00000523961 SLC2A3P11169 496 aa13.02□□□□□ -0.33
CCNC-216ENST00000523961 GRIA2P42262 883 aa13.02□□□□□ -0.33
CCNC-216ENST00000523961 PITX1P78337 314 aaPredicted RBP13.02□□□□□ -0.33
CCNC-216ENST00000523961 MTAPQ13126 283 aa13.02□□□□□ -0.33
CCNC-216ENST00000523961 EIF4EBP2Q13542 120 aaPredicted RBP13.02□□□□□ -0.33
CCNC-216ENST00000523961 TRIM14Q14142 442 aa13.02□□□□□ -0.33
CCNC-216ENST00000523961 ANGPT1Q15389 498 aa13.02□□□□□ -0.33
CCNC-216ENST00000523961 MPPE1Q53F39 396 aa13.02□□□□□ -0.33
CCNC-216ENST00000523961 E4F1Q66K89 784 aaPredicted RBP13.02□□□□□ -0.33
CCNC-216ENST00000523961 SPEM1Q8N4L4 309 aa13.02□□□□□ -0.33
CCNC-216ENST00000523961 CPLX3Q8WVH0 158 aa13.02□□□□□ -0.33
CCNC-216ENST00000523961 NPY6RQ99463 290 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms