RNA–Protein interactions for RNA: ENST00000523427.1

PVT1-219, Transcript of Pvt1 oncogene, humanhuman

TSL 3 BASIC

Gene PVT1, Length 938 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-219ENST00000523427 PENKP01210 267 aaPredicted RBP27.21■■□□□ 1.95
PVT1-219ENST00000523427 TRIM49P0CI25 452 aa27.21■■□□□ 1.95
PVT1-219ENST00000523427 TRIM49CP0CI26 452 aa27.21■■□□□ 1.95
PVT1-219ENST00000523427 CHKAP35790 457 aa27.21■■□□□ 1.95
PVT1-219ENST00000523427 GCLMP48507 274 aa27.21■■□□□ 1.95
PVT1-219ENST00000523427 PSEN1P49768 467 aa27.21■■□□□ 1.95
PVT1-219ENST00000523427 VAMP7P51809 220 aa27.21■■□□□ 1.95
PVT1-219ENST00000523427 ZNF234Q14588 700 aa27.21■■□□□ 1.95
PVT1-219ENST00000523427 PPP1R26Q5T8A7 1209 aaPredicted RBP27.21■■□□□ 1.95
PVT1-219ENST00000523427 RESP18Q5W5W9 173 aa27.21■■□□□ 1.95
PVT1-219ENST00000523427 CCNI2Q6ZMN8 369 aaPredicted RBP27.21■■□□□ 1.95
PVT1-219ENST00000523427 METTL3Q86U44 580 aaKnown RBP27.21■■□□□ 1.95
PVT1-219ENST00000523427 FNDC3AQ9Y2H6 1198 aaKnown RBP27.21■■□□□ 1.95
PVT1-219ENST00000523427 ZNF510Q9Y2H8 683 aa27.21■■□□□ 1.95
PVT1-219ENST00000523427 FREM2Q5SZK8 3169 aa27.21■■□□□ 1.95
PVT1-219ENST00000523427 METTL12A8MUP2 240 aa27.2■■□□□ 1.94
PVT1-219ENST00000523427 CILPO75339 1184 aa27.2■■□□□ 1.94
PVT1-219ENST00000523427 CYBBP04839 570 aa27.2■■□□□ 1.94
PVT1-219ENST00000523427 EPHX1P07099 455 aa27.2■■□□□ 1.94
PVT1-219ENST00000523427 PDIA4P13667 645 aaKnown RBP27.2■■□□□ 1.94
PVT1-219ENST00000523427 PRKCHP24723 683 aa27.2■■□□□ 1.94
PVT1-219ENST00000523427 MATKP42679 507 aa27.2■■□□□ 1.94
PVT1-219ENST00000523427 COG7P83436 770 aa27.2■■□□□ 1.94
PVT1-219ENST00000523427 INCA1Q0VD86 236 aa27.2■■□□□ 1.94
PVT1-219ENST00000523427 ITPR1Q14643 2758 aa27.2■■□□□ 1.94
PVT1-219ENST00000523427 COL28A1Q2UY09 1125 aa27.2■■□□□ 1.94
PVT1-219ENST00000523427 RSRC2Q7L4I2 434 aaKnown RBP27.2■■□□□ 1.94
PVT1-219ENST00000523427 CCDC186Q7Z3E2 898 aa27.2■■□□□ 1.94
PVT1-219ENST00000523427 ANKS1BQ7Z6G8 1248 aa27.2■■□□□ 1.94
PVT1-219ENST00000523427 CADM4Q8NFZ8 388 aa27.2■■□□□ 1.94
PVT1-219ENST00000523427 TAS1R2Q8TE23 839 aa27.2■■□□□ 1.94
PVT1-219ENST00000523427 DDI1Q8WTU0 396 aa27.2■■□□□ 1.94
PVT1-219ENST00000523427 PAGE5Q96GU1 130 aa27.2■■□□□ 1.94
PVT1-219ENST00000523427 DUSP16Q9BY84 665 aa27.2■■□□□ 1.94
PVT1-219ENST00000523427 BACH2Q9BYV9 841 aa27.2■■□□□ 1.94
PVT1-219ENST00000523427 PNPLA8Q9NP80 782 aa27.2■■□□□ 1.94
PVT1-219ENST00000523427 TM7SF3Q9NS93 570 aa27.2■■□□□ 1.94
PVT1-219ENST00000523427 ELOVL2Q9NXB9 296 aa27.2■■□□□ 1.94
PVT1-219ENST00000523427 AGO1Q9UL18 857 aaKnown RBP27.2■■□□□ 1.94
PVT1-219ENST00000523427 GPSM3Q9Y4H4 160 aa27.2■■□□□ 1.94
PVT1-219ENST00000523427 SLC12A8A0AV02 714 aa27.19■■□□□ 1.94
PVT1-219ENST00000523427 PDXKO00764 312 aa27.19■■□□□ 1.94
PVT1-219ENST00000523427 IKBKBO14920 756 aa27.19■■□□□ 1.94
PVT1-219ENST00000523427 CBFA2T3O75081 653 aa27.19■■□□□ 1.94
PVT1-219ENST00000523427 OXTRP30559 389 aa27.19■■□□□ 1.94
PVT1-219ENST00000523427 ARID5AQ03989 594 aa27.19■■□□□ 1.94
PVT1-219ENST00000523427 HLA-BQ31612 363 aa27.19■■□□□ 1.94
PVT1-219ENST00000523427 SERPINA13PQ6UXR4 307 aa27.19■■□□□ 1.94
PVT1-219ENST00000523427 HEXIM2Q96MH2 286 aaKnown RBP27.19■■□□□ 1.94
PVT1-219ENST00000523427 NUP58Q9BVL2 599 aa27.19■■□□□ 1.94
PVT1-219ENST00000523427 DCLK3Q9C098 648 aa27.19■■□□□ 1.94
PVT1-219ENST00000523427 CYP3A43Q9HB55 503 aa27.19■■□□□ 1.94
PVT1-219ENST00000523427 KNL1Q8NG31 2342 aa27.18■■□□□ 1.94
PVT1-219ENST00000523427 A0A1B0GVT2 93 aa27.18■■□□□ 1.94
PVT1-219ENST00000523427 CER1O95813 267 aa27.18■■□□□ 1.94
PVT1-219ENST00000523427 HLA-EP13747 358 aa27.18■■□□□ 1.94
PVT1-219ENST00000523427 BNC1Q01954 994 aa27.18■■□□□ 1.94
PVT1-219ENST00000523427 MARCH9Q86YJ5 346 aa27.18■■□□□ 1.94
PVT1-219ENST00000523427 RHBDD1Q8TEB9 315 aa27.18■■□□□ 1.94
PVT1-219ENST00000523427 HNRNPLLQ8WVV9 542 aaKnown RBP27.18■■□□□ 1.94
PVT1-219ENST00000523427 PIWIL1Q96J94 861 aaKnown RBP27.18■■□□□ 1.94
PVT1-219ENST00000523427 NIF3L1Q9GZT8 377 aa27.18■■□□□ 1.94
PVT1-219ENST00000523427 CLIC5Q9NZA1 410 aa27.18■■□□□ 1.94
PVT1-219ENST00000523427 MARCH2Q9P0N8 246 aa27.18■■□□□ 1.94
PVT1-219ENST00000523427 NPC1O15118 1278 aa27.17■■□□□ 1.94
PVT1-219ENST00000523427 CALUO43852 315 aaPredicted RBP27.17■■□□□ 1.94
PVT1-219ENST00000523427 SLFN14P0C7P3 912 aa27.17■■□□□ 1.94
PVT1-219ENST00000523427 CSNK1EP49674 416 aaKnown RBP27.17■■□□□ 1.94
PVT1-219ENST00000523427 PPP3CAQ08209 521 aa27.17■■□□□ 1.94
PVT1-219ENST00000523427 CCDC157Q569K6 752 aa27.17■■□□□ 1.94
PVT1-219ENST00000523427 PDZD3Q86UT5 571 aa27.17■■□□□ 1.94
PVT1-219ENST00000523427 CDK5RAP1Q96SZ6 601 aaKnown RBP27.17■■□□□ 1.94
PVT1-219ENST00000523427 STRIP2Q9ULQ0 834 aa27.17■■□□□ 1.94
PVT1-219ENST00000523427 RAXQ9Y2V3 346 aa27.17■■□□□ 1.94
PVT1-219ENST00000523427 USP3Q9Y6I4 520 aa27.17■■□□□ 1.94
PVT1-219ENST00000523427 SLCO1B1Q9Y6L6 691 aa27.17■■□□□ 1.94
PVT1-219ENST00000523427 ADAMTS20P59510 1910 aa27.16■■□□□ 1.94
PVT1-219ENST00000523427 ACACAQ13085 2346 aa27.16■■□□□ 1.94
PVT1-219ENST00000523427 TSPAN3O60637 253 aa27.16■■□□□ 1.94
PVT1-219ENST00000523427 ATXN1LP0C7T5 689 aaKnown RBP27.16■■□□□ 1.94
PVT1-219ENST00000523427 ZNF132P52740 706 aa27.16■■□□□ 1.94
PVT1-219ENST00000523427 COPAP53621 1224 aa27.16■■□□□ 1.94
PVT1-219ENST00000523427 ENPP2Q13822 863 aa27.16■■□□□ 1.94
PVT1-219ENST00000523427 ZNF366Q8N895 744 aa27.16■■□□□ 1.94
PVT1-219ENST00000523427 CCDC150Q8NCX0 1101 aa27.16■■□□□ 1.94
PVT1-219ENST00000523427 DNAI2Q9GZS0 605 aa27.16■■□□□ 1.94
PVT1-219ENST00000523427 APC2O95996 2303 aa27.15■■□□□ 1.94
PVT1-219ENST00000523427 ACTN4O43707 911 aaKnown RBP27.15■■□□□ 1.94
PVT1-219ENST00000523427 TMEM215Q68D42 235 aa27.15■■□□□ 1.94
PVT1-219ENST00000523427 IL27RAQ6UWB1 636 aa27.15■■□□□ 1.94
PVT1-219ENST00000523427 GLRX5Q86SX6 157 aa27.15■■□□□ 1.94
PVT1-219ENST00000523427 NDRG1Q92597 394 aaKnown RBP27.15■■□□□ 1.94
PVT1-219ENST00000523427 ARID3AQ99856 593 aa27.15■■□□□ 1.94
PVT1-219ENST00000523427 WDR3Q9UNX4 943 aaKnown RBP eCLIP27.15■■□□□ 1.94
PVT1-219ENST00000523427 MAPK8IP1Q9UQF2 711 aa27.15■■□□□ 1.94
PVT1-219ENST00000523427 NFE2L3Q9Y4A8 694 aa27.15■■□□□ 1.94
PVT1-219ENST00000523427 PLXNB3Q9ULL4 1909 aa27.14■■□□□ 1.94
PVT1-219ENST00000523427 KCNK3O14649 394 aa27.14■■□□□ 1.94
PVT1-219ENST00000523427 KRT13P13646 458 aa27.14■■□□□ 1.94
PVT1-219ENST00000523427 NR2F2P24468 414 aa27.14■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms