RNA–Protein interactions for RNA: ENST00000523328.5

PVT1-218, Transcript of Pvt1 oncogene, humanhuman

TSL 1 (best)

Gene PVT1, Length 343 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-218ENST00000523328 BACH2Q9BYV9 841 aa23.89■■□□□ 1.41
PVT1-218ENST00000523328 TM7SF3Q9NS93 570 aa23.89■■□□□ 1.41
PVT1-218ENST00000523328 TOR4AQ9NXH8 423 aa23.89■■□□□ 1.41
PVT1-218ENST00000523328 FNDC3AQ9Y2H6 1198 aaKnown RBP23.89■■□□□ 1.41
PVT1-218ENST00000523328 ZNF510Q9Y2H8 683 aa23.89■■□□□ 1.41
PVT1-218ENST00000523328 USP3Q9Y6I4 520 aa23.89■■□□□ 1.41
PVT1-218ENST00000523328 GOLGA4Q13439 2230 aaKnown RBP23.89■■□□□ 1.41
PVT1-218ENST00000523328 TMEM131Q92545 1883 aa23.89■■□□□ 1.41
PVT1-218ENST00000523328 SMG1Q96Q15 3661 aaKnown RBP23.89■■□□□ 1.41
PVT1-218ENST00000523328 KLRC4O43908 158 aa23.88■■□□□ 1.41
PVT1-218ENST00000523328 CER1O95813 267 aa23.88■■□□□ 1.41
PVT1-218ENST00000523328 HLA-DRAP01903 254 aa23.88■■□□□ 1.41
PVT1-218ENST00000523328 OXTRP30559 389 aa23.88■■□□□ 1.41
PVT1-218ENST00000523328 CHKAP35790 457 aa23.88■■□□□ 1.41
PVT1-218ENST00000523328 MATKP42679 507 aa23.88■■□□□ 1.41
PVT1-218ENST00000523328 ZNF234Q14588 700 aa23.88■■□□□ 1.41
PVT1-218ENST00000523328 TADA2BQ86TJ2 420 aa23.88■■□□□ 1.41
PVT1-218ENST00000523328 GRAMD1CQ8IYS0 662 aa23.88■■□□□ 1.41
PVT1-218ENST00000523328 UCMAQ8WVF2 138 aa23.88■■□□□ 1.41
PVT1-218ENST00000523328 NT5C1AQ9BXI3 368 aa23.88■■□□□ 1.41
PVT1-218ENST00000523328 KCTD10Q9H3F6 313 aa23.88■■□□□ 1.41
PVT1-218ENST00000523328 CLIC5Q9NZA1 410 aa23.88■■□□□ 1.41
PVT1-218ENST00000523328 CLEC4EQ9ULY5 219 aa23.88■■□□□ 1.41
PVT1-218ENST00000523328 URB1O60287 2271 aaKnown RBP23.87■■□□□ 1.41
PVT1-218ENST00000523328 IKBKBO14920 756 aa23.87■■□□□ 1.41
PVT1-218ENST00000523328 DKK1O94907 266 aa23.87■■□□□ 1.41
PVT1-218ENST00000523328 PIK3CAP42336 1068 aa23.87■■□□□ 1.41
PVT1-218ENST00000523328 HLA-BQ31612 363 aa23.87■■□□□ 1.41
PVT1-218ENST00000523328 IL27RAQ6UWB1 636 aa23.87■■□□□ 1.41
PVT1-218ENST00000523328 PRCCQ92733 491 aaPredicted RBP23.87■■□□□ 1.41
PVT1-218ENST00000523328 NUP58Q9BVL2 599 aa23.87■■□□□ 1.41
PVT1-218ENST00000523328 APOBEC3GQ9HC16 384 aaKnown RBP23.87■■□□□ 1.41
PVT1-218ENST00000523328 EIF2B4Q9UI10 523 aaKnown RBP23.87■■□□□ 1.41
PVT1-218ENST00000523328 SYNCRIPO60506 623 aaKnown RBP23.86■■□□□ 1.41
PVT1-218ENST00000523328 RALAP11233 206 aa23.86■■□□□ 1.41
PVT1-218ENST00000523328 TRIM21P19474 475 aaKnown RBP23.86■■□□□ 1.41
PVT1-218ENST00000523328 PRKCHP24723 683 aa23.86■■□□□ 1.41
PVT1-218ENST00000523328 CORO1AP31146 461 aaKnown RBP23.86■■□□□ 1.41
PVT1-218ENST00000523328 COG7P83436 770 aa23.86■■□□□ 1.41
PVT1-218ENST00000523328 TMPRSS7Q7RTY8 843 aa23.86■■□□□ 1.41
PVT1-218ENST00000523328 ANKS1BQ7Z6G8 1248 aa23.86■■□□□ 1.41
PVT1-218ENST00000523328 ELOVL2Q9NXB9 296 aa23.86■■□□□ 1.41
PVT1-218ENST00000523328 RASAL2Q9UJF2 1139 aa23.86■■□□□ 1.41
PVT1-218ENST00000523328 AGO1Q9UL18 857 aaKnown RBP23.86■■□□□ 1.41
PVT1-218ENST00000523328 NR3C1P04150 777 aa23.85■■□□□ 1.41
PVT1-218ENST00000523328 EIF4HQ15056 248 aaKnown RBP23.85■■□□□ 1.41
PVT1-218ENST00000523328 TMEM215Q68D42 235 aa23.85■■□□□ 1.41
PVT1-218ENST00000523328 CACUL1Q86Y37 369 aa23.85■■□□□ 1.41
PVT1-218ENST00000523328 SORCS1Q8WY21 1168 aa23.85■■□□□ 1.41
PVT1-218ENST00000523328 CDK5RAP1Q96SZ6 601 aaKnown RBP23.85■■□□□ 1.41
PVT1-218ENST00000523328 DUSP16Q9BY84 665 aa23.85■■□□□ 1.41
PVT1-218ENST00000523328 DCLK3Q9C098 648 aa23.85■■□□□ 1.41
PVT1-218ENST00000523328 CYP3A43Q9HB55 503 aa23.85■■□□□ 1.41
PVT1-218ENST00000523328 RAXQ9Y2V3 346 aa23.85■■□□□ 1.41
PVT1-218ENST00000523328 PCDHGB2Q9Y5G2 931 aa23.85■■□□□ 1.41
PVT1-218ENST00000523328 SLCO1B1Q9Y6L6 691 aa23.85■■□□□ 1.41
PVT1-218ENST00000523328 MUC22E2RYF6 1773 aaPredicted RBP23.84■■□□□ 1.41
PVT1-218ENST00000523328 A0A1B0GVT2 93 aa23.84■■□□□ 1.41
PVT1-218ENST00000523328 PDXKO00764 312 aa23.84■■□□□ 1.41
PVT1-218ENST00000523328 FLRT2O43155 660 aa23.84■■□□□ 1.41
PVT1-218ENST00000523328 HMBSP08397 361 aa23.84■■□□□ 1.41
PVT1-218ENST00000523328 ATXN1LP0C7T5 689 aaKnown RBP23.84■■□□□ 1.41
PVT1-218ENST00000523328 ACADMP11310 421 aa23.84■■□□□ 1.41
PVT1-218ENST00000523328 EFEMP1Q12805 493 aa23.84■■□□□ 1.41
PVT1-218ENST00000523328 PPP1R26Q5T8A7 1209 aaPredicted RBP23.84■■□□□ 1.41
PVT1-218ENST00000523328 RESP18Q5W5W9 173 aa23.84■■□□□ 1.41
PVT1-218ENST00000523328 DENND1CQ8IV53 801 aa23.84■■□□□ 1.41
PVT1-218ENST00000523328 CPXM2Q8N436 756 aa23.84■■□□□ 1.41
PVT1-218ENST00000523328 DKK4Q9UBT3 224 aa23.84■■□□□ 1.41
PVT1-218ENST00000523328 PCDHA7Q9UN72 937 aa23.84■■□□□ 1.41
PVT1-218ENST00000523328 EPHX1P07099 455 aa23.83■■□□□ 1.41
PVT1-218ENST00000523328 CSNK1EP49674 416 aaKnown RBP23.83■■□□□ 1.41
PVT1-218ENST00000523328 CEP135Q66GS9 1140 aa23.83■■□□□ 1.41
PVT1-218ENST00000523328 RHBDD1Q8TEB9 315 aa23.83■■□□□ 1.41
PVT1-218ENST00000523328 HNRNPLLQ8WVV9 542 aaKnown RBP23.83■■□□□ 1.41
PVT1-218ENST00000523328 CDC6Q99741 560 aa23.83■■□□□ 1.41
PVT1-218ENST00000523328 CIPCQ9C0C6 399 aa23.83■■□□□ 1.41
PVT1-218ENST00000523328 PCED1AQ9H1Q7 454 aa23.83■■□□□ 1.41
PVT1-218ENST00000523328 FAM13BQ9NYF5 915 aa23.83■■□□□ 1.41
PVT1-218ENST00000523328 KIF20AO95235 890 aa23.82■■□□□ 1.4
PVT1-218ENST00000523328 C7P10643 843 aa23.82■■□□□ 1.4
PVT1-218ENST00000523328 CD58P19256 250 aa23.82■■□□□ 1.4
PVT1-218ENST00000523328 E2F5Q15329 346 aa23.82■■□□□ 1.4
PVT1-218ENST00000523328 KMT5BQ4FZB7 885 aa23.82■■□□□ 1.4
PVT1-218ENST00000523328 SERPINA13PQ6UXR4 307 aa23.82■■□□□ 1.4
PVT1-218ENST00000523328 FAM124AQ86V42 546 aa23.82■■□□□ 1.4
PVT1-218ENST00000523328 FAM217AQ8IXS0 508 aa23.82■■□□□ 1.4
PVT1-218ENST00000523328 TAS1R2Q8TE23 839 aa23.82■■□□□ 1.4
PVT1-218ENST00000523328 SLC2A11Q9BYW1 496 aa23.82■■□□□ 1.4
PVT1-218ENST00000523328 IMPG2Q9BZV3 1241 aa23.82■■□□□ 1.4
PVT1-218ENST00000523328 SCUBE2Q9NQ36 999 aa23.82■■□□□ 1.4
PVT1-218ENST00000523328 EXOC1Q9NV70 894 aa23.82■■□□□ 1.4
PVT1-218ENST00000523328 SERTAD1Q9UHV2 236 aa23.82■■□□□ 1.4
PVT1-218ENST00000523328 BTBD3Q9Y2F9 522 aa23.82■■□□□ 1.4
PVT1-218ENST00000523328 CYBBP04839 570 aa23.81■■□□□ 1.4
PVT1-218ENST00000523328 VAMP7P51809 220 aa23.81■■□□□ 1.4
PVT1-218ENST00000523328 CAMK2GQ13555 558 aaPredicted RBP23.81■■□□□ 1.4
PVT1-218ENST00000523328 MARCH9Q86YJ5 346 aa23.81■■□□□ 1.4
PVT1-218ENST00000523328 OR2T3Q8NH03 318 aa23.81■■□□□ 1.4
PVT1-218ENST00000523328 DDI1Q8WTU0 396 aa23.81■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms