RNA–Protein interactions for RNA: ENST00000523068.1

PVT1-216, Transcript of Pvt1 oncogene, humanhuman

TSL 5 BASIC

Gene PVT1, Length 844 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-216ENST00000523068 HSFY1Q96LI6 401 aa11.39□□□□□ -0.59
PVT1-216ENST00000523068 INTS2Q9H0H0 1204 aaKnown RBP11.39□□□□□ -0.59
PVT1-216ENST00000523068 ZDHHC4Q9NPG8 344 aa11.39□□□□□ -0.59
PVT1-216ENST00000523068 PLK2Q9NYY3 685 aa11.39□□□□□ -0.59
PVT1-216ENST00000523068 TMEM63CQ9P1W3 806 aa11.39□□□□□ -0.59
PVT1-216ENST00000523068 FBXO10Q9UK96 956 aa11.39□□□□□ -0.59
PVT1-216ENST00000523068 INVSQ9Y283 1065 aa11.39□□□□□ -0.59
PVT1-216ENST00000523068 SLC27A6Q9Y2P4 619 aa11.39□□□□□ -0.59
PVT1-216ENST00000523068 ABCA7Q8IZY2 2146 aa11.39□□□□□ -0.59
PVT1-216ENST00000523068 CEP250Q9BV73 2442 aa11.38□□□□□ -0.59
PVT1-216ENST00000523068 BCLAF3A2AJT9 711 aaKnown RBP11.38□□□□□ -0.59
PVT1-216ENST00000523068 PRRT4C9JH25 899 aa11.38□□□□□ -0.59
PVT1-216ENST00000523068 RNF225M0QZC1 329 aaPredicted RBP11.38□□□□□ -0.59
PVT1-216ENST00000523068 GFRA2O00451 464 aa11.38□□□□□ -0.59
PVT1-216ENST00000523068 MAP3K13O43283 966 aa11.38□□□□□ -0.59
PVT1-216ENST00000523068 SART1O43290 800 aaKnown RBP11.38□□□□□ -0.59
PVT1-216ENST00000523068 MED7O43513 233 aa11.38□□□□□ -0.59
PVT1-216ENST00000523068 CAVIN2O95810 425 aa11.38□□□□□ -0.59
PVT1-216ENST00000523068 LATS1O95835 1130 aa11.38□□□□□ -0.59
PVT1-216ENST00000523068 CISD3P0C7P0 127 aa11.38□□□□□ -0.59
PVT1-216ENST00000523068 KRT5P13647 590 aa11.38□□□□□ -0.59
PVT1-216ENST00000523068 BRD2P25440 801 aaKnown RBP11.38□□□□□ -0.59
PVT1-216ENST00000523068 P2RY2P41231 377 aa11.38□□□□□ -0.59
PVT1-216ENST00000523068 MFAP3P55082 362 aa11.38□□□□□ -0.59
PVT1-216ENST00000523068 SF3A2Q15428 464 aaKnown RBP11.38□□□□□ -0.59
PVT1-216ENST00000523068 CCDC6Q16204 474 aa11.38□□□□□ -0.59
PVT1-216ENST00000523068 MEA1Q16626 185 aa11.38□□□□□ -0.59
PVT1-216ENST00000523068 TPD52L1Q16890 204 aaPredicted RBP11.38□□□□□ -0.59
PVT1-216ENST00000523068 MPPE1Q53F39 396 aa11.38□□□□□ -0.59
PVT1-216ENST00000523068 SPDYCQ5MJ68 293 aa11.38□□□□□ -0.59
PVT1-216ENST00000523068 EGFLAMQ63HQ2 1017 aa11.38□□□□□ -0.59
PVT1-216ENST00000523068 IL31Q6EBC2 164 aa11.38□□□□□ -0.59
PVT1-216ENST00000523068 PMF1Q6P1K2 205 aa11.38□□□□□ -0.59
PVT1-216ENST00000523068 TOGARAM2Q6ZUX3 1019 aa11.38□□□□□ -0.59
PVT1-216ENST00000523068 LPCAT2Q7L5N7 544 aa11.38□□□□□ -0.59
PVT1-216ENST00000523068 FAM217AQ8IXS0 508 aa11.38□□□□□ -0.59
PVT1-216ENST00000523068 DDI1Q8WTU0 396 aa11.38□□□□□ -0.59
PVT1-216ENST00000523068 NDRG1Q92597 394 aaKnown RBP11.38□□□□□ -0.59
PVT1-216ENST00000523068 EDEM1Q92611 657 aa11.38□□□□□ -0.59
PVT1-216ENST00000523068 KAT5Q92993 513 aa11.38□□□□□ -0.59
PVT1-216ENST00000523068 GABRG3Q99928 467 aa11.38□□□□□ -0.59
PVT1-216ENST00000523068 SLC2A11Q9BYW1 496 aa11.38□□□□□ -0.59
PVT1-216ENST00000523068 CLSTN2Q9H4D0 955 aa11.38□□□□□ -0.59
PVT1-216ENST00000523068 UBE2TQ9NPD8 197 aaPredicted RBP11.38□□□□□ -0.59
PVT1-216ENST00000523068 SFMBT1Q9UHJ3 866 aa11.38□□□□□ -0.59
PVT1-216ENST00000523068 CNTN6Q9UQ52 1028 aa11.38□□□□□ -0.59
PVT1-216ENST00000523068 SDK1Q7Z5N4 2213 aa11.37□□□□□ -0.59
PVT1-216ENST00000523068 A0A1W2PQF6 199 aa11.37□□□□□ -0.59
PVT1-216ENST00000523068 DCDC2BA2VCK2 349 aa11.37□□□□□ -0.59
PVT1-216ENST00000523068 GDF9O60383 454 aa11.37□□□□□ -0.59
PVT1-216ENST00000523068 ZNF217O75362 1048 aa11.37□□□□□ -0.59
PVT1-216ENST00000523068 LTFP02788 710 aa11.37□□□□□ -0.59
PVT1-216ENST00000523068 DPP6P42658 865 aa11.37□□□□□ -0.59
PVT1-216ENST00000523068 ACADSBP45954 432 aa11.37□□□□□ -0.59
PVT1-216ENST00000523068 DHPSP49366 369 aaPredicted RBP11.37□□□□□ -0.59
PVT1-216ENST00000523068 RGS7P49802 495 aa11.37□□□□□ -0.59
PVT1-216ENST00000523068 EIF4HQ15056 248 aaKnown RBP11.37□□□□□ -0.59
PVT1-216ENST00000523068 ADGRF1Q5T601 910 aa11.37□□□□□ -0.59
PVT1-216ENST00000523068 NUGGCQ68CJ6 796 aa11.37□□□□□ -0.59
PVT1-216ENST00000523068 SMYD5Q6GMV2 418 aa11.37□□□□□ -0.59
PVT1-216ENST00000523068 MSANTD2Q6P1R3 559 aa11.37□□□□□ -0.59
PVT1-216ENST00000523068 TRIM65Q6PJ69 517 aa11.37□□□□□ -0.59
PVT1-216ENST00000523068 SLC36A4Q6YBV0 504 aa11.37□□□□□ -0.59
PVT1-216ENST00000523068 GBP6Q6ZN66 633 aa11.37□□□□□ -0.59
PVT1-216ENST00000523068 CYP2U1Q7Z449 544 aa11.37□□□□□ -0.59
PVT1-216ENST00000523068 ANKS1BQ7Z6G8 1248 aa11.37□□□□□ -0.59
PVT1-216ENST00000523068 FAM114A1Q8IWE2 563 aa11.37□□□□□ -0.59
PVT1-216ENST00000523068 UNC45BQ8IWX7 931 aa11.37□□□□□ -0.59
PVT1-216ENST00000523068 IPO4Q8TEX9 1081 aaKnown RBP11.37□□□□□ -0.59
PVT1-216ENST00000523068 KREMEN1Q96MU8 473 aa11.37□□□□□ -0.59
PVT1-216ENST00000523068 ZSWIM1Q9BR11 485 aa11.37□□□□□ -0.59
PVT1-216ENST00000523068 TRIM62Q9BVG3 475 aa11.37□□□□□ -0.59
PVT1-216ENST00000523068 IRX2Q9BZI1 471 aaPredicted RBP11.37□□□□□ -0.59
PVT1-216ENST00000523068 ST7Q9NRC1 585 aa11.37□□□□□ -0.59
PVT1-216ENST00000523068 DACH1Q9UI36 760 aa11.37□□□□□ -0.59
PVT1-216ENST00000523068 HCN2Q9UL51 889 aa11.37□□□□□ -0.59
PVT1-216ENST00000523068 MED19A0JLT2 244 aaPredicted RBP11.36□□□□□ -0.59
PVT1-216ENST00000523068 SYCE3A1L190 88 aa11.36□□□□□ -0.59
PVT1-216ENST00000523068 GTPBP10A4D1E9 387 aaKnown RBP11.36□□□□□ -0.59
PVT1-216ENST00000523068 GOLGA6L3A6NEY3 463 aa11.36□□□□□ -0.59
PVT1-216ENST00000523068 PIK3R2O00459 728 aa11.36□□□□□ -0.59
PVT1-216ENST00000523068 KHNYNO15037 678 aaKnown RBP11.36□□□□□ -0.59
PVT1-216ENST00000523068 AP5Z1O43299 807 aa11.36□□□□□ -0.59
PVT1-216ENST00000523068 TIMM44O43615 452 aa11.36□□□□□ -0.59
PVT1-216ENST00000523068 PRKCSHP14314 528 aaPredicted RBP11.36□□□□□ -0.59
PVT1-216ENST00000523068 GABRG2P18507 467 aa11.36□□□□□ -0.59
PVT1-216ENST00000523068 BCKDHBP21953 392 aa11.36□□□□□ -0.59
PVT1-216ENST00000523068 GNA15P30679 374 aa11.36□□□□□ -0.59
PVT1-216ENST00000523068 WASP42768 502 aa11.36□□□□□ -0.59
PVT1-216ENST00000523068 MTIF2P46199 727 aaKnown RBP11.36□□□□□ -0.59
PVT1-216ENST00000523068 SLC11A2P49281 568 aa11.36□□□□□ -0.59
PVT1-216ENST00000523068 ARID5AQ03989 594 aa11.36□□□□□ -0.59
PVT1-216ENST00000523068 RING1Q06587 406 aa11.36□□□□□ -0.59
PVT1-216ENST00000523068 STARD3Q14849 445 aa11.36□□□□□ -0.59
PVT1-216ENST00000523068 EXOC3L4Q17RC7 722 aa11.36□□□□□ -0.59
PVT1-216ENST00000523068 MAP7D1Q3KQU3 841 aa11.36□□□□□ -0.59
PVT1-216ENST00000523068 ZNF557Q8N988 423 aaPredicted RBP11.36□□□□□ -0.59
PVT1-216ENST00000523068 STK32AQ8WU08 396 aa11.36□□□□□ -0.59
PVT1-216ENST00000523068 RLN3Q8WXF3 142 aa11.36□□□□□ -0.59
PVT1-216ENST00000523068 TMA16Q96EY4 203 aaKnown RBP11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms