RNA–Protein interactions for RNA: ENST00000522998.1

PCM1-217, Transcript of pericentriolar material 1, humanhuman

TSL 3

Gene PCM1, Length 493 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-217ENST00000522998 EPHB1P54762 984 aa3.16□□□□□ -1.9
PCM1-217ENST00000522998 RAB1AP62820 205 aa3.16□□□□□ -1.9
PCM1-217ENST00000522998 SHBQ15464 509 aa3.16□□□□□ -1.9
PCM1-217ENST00000522998 ANO6Q4KMQ2 910 aa3.16□□□□□ -1.9
PCM1-217ENST00000522998 PIK3CD-AS1Q5SR53 167 aa3.16□□□□□ -1.9
PCM1-217ENST00000522998 PRSS57Q6UWY2 283 aa3.16□□□□□ -1.9
PCM1-217ENST00000522998 SKAP1Q86WV1 359 aa3.16□□□□□ -1.9
PCM1-217ENST00000522998 TMEM174Q8WUU8 243 aa3.16□□□□□ -1.9
PCM1-217ENST00000522998 DPH1Q9BZG8 443 aa3.16□□□□□ -1.9
PCM1-217ENST00000522998 THRAP3Q9Y2W1 955 aaKnown RBP3.16□□□□□ -1.9
PCM1-217ENST00000522998 MMP24Q9Y5R2 645 aa3.16□□□□□ -1.9
PCM1-217ENST00000522998 LOC102723971A0A1B0GUV8 181 aa3.15□□□□□ -1.91
PCM1-217ENST00000522998 E2F8A0AVK6 867 aa3.15□□□□□ -1.91
PCM1-217ENST00000522998 DENND3A2RUS2 1198 aa3.15□□□□□ -1.91
PCM1-217ENST00000522998 A6NNC1 897 aa3.15□□□□□ -1.91
PCM1-217ENST00000522998 SMTNL1A8MU46 457 aa3.15□□□□□ -1.91
PCM1-217ENST00000522998 H7C4K7 107 aa3.15□□□□□ -1.91
PCM1-217ENST00000522998 AP1G1O43747 822 aa3.15□□□□□ -1.91
PCM1-217ENST00000522998 RRP9O43818 475 aaKnown RBP3.15□□□□□ -1.91
PCM1-217ENST00000522998 SNUPNO95149 360 aaKnown RBP3.15□□□□□ -1.91
PCM1-217ENST00000522998 S100BP04271 92 aaPredicted RBP3.15□□□□□ -1.91
PCM1-217ENST00000522998 TMIGD3P0DMS9 266 aaPredicted RBP3.15□□□□□ -1.91
PCM1-217ENST00000522998 ITGA8P53708 1063 aa3.15□□□□□ -1.91
PCM1-217ENST00000522998 EIF4A1P60842 406 aaKnown RBP3.15□□□□□ -1.91
PCM1-217ENST00000522998 CRYZQ08257 329 aaKnown RBP3.15□□□□□ -1.91
PCM1-217ENST00000522998 C6orf10Q5SRN2 563 aa3.15□□□□□ -1.91
PCM1-217ENST00000522998 ODR4Q5SWX8 454 aa3.15□□□□□ -1.91
PCM1-217ENST00000522998 SPSB3Q6PJ21 355 aa3.15□□□□□ -1.91
PCM1-217ENST00000522998 ZBTB46Q86UZ6 589 aa3.15□□□□□ -1.91
PCM1-217ENST00000522998 SPSB4Q96A44 273 aa3.15□□□□□ -1.91
PCM1-217ENST00000522998 EME1Q96AY2 570 aa3.15□□□□□ -1.91
PCM1-217ENST00000522998 HES6Q96HZ4 224 aa3.15□□□□□ -1.91
PCM1-217ENST00000522998 MAP3K14Q99558 947 aa3.15□□□□□ -1.91
PCM1-217ENST00000522998 SMAD5Q99717 465 aaKnown RBP3.15□□□□□ -1.91
PCM1-217ENST00000522998 HTATIP2Q9BUP3 242 aa3.15□□□□□ -1.91
PCM1-217ENST00000522998 METTL14Q9HCE5 456 aaKnown RBP3.15□□□□□ -1.91
PCM1-217ENST00000522998 VPS45Q9NRW7 570 aa3.15□□□□□ -1.91
PCM1-217ENST00000522998 CAMSAP3Q9P1Y5 1249 aaPredicted RBP3.15□□□□□ -1.91
PCM1-217ENST00000522998 A0A088AWK7 358 aa3.14□□□□□ -1.91
PCM1-217ENST00000522998 CCP110O43303 1012 aa3.14□□□□□ -1.91
PCM1-217ENST00000522998 PIAS2O75928 621 aa3.14□□□□□ -1.91
PCM1-217ENST00000522998 MBPP02686 304 aaPredicted RBP3.14□□□□□ -1.91
PCM1-217ENST00000522998 CPA1P15085 419 aa3.14□□□□□ -1.91
PCM1-217ENST00000522998 PTDSS1P48651 473 aaKnown RBP3.14□□□□□ -1.91
PCM1-217ENST00000522998 VPS41P49754 854 aa3.14□□□□□ -1.91
PCM1-217ENST00000522998 ROR2Q01974 943 aaKnown RBP3.14□□□□□ -1.91
PCM1-217ENST00000522998 GAD2Q05329 585 aa3.14□□□□□ -1.91
PCM1-217ENST00000522998 PIN1Q13526 163 aaPredicted RBP3.14□□□□□ -1.91
PCM1-217ENST00000522998 CNGA3Q16281 694 aa3.14□□□□□ -1.91
PCM1-217ENST00000522998 USP49Q70CQ1 688 aa3.14□□□□□ -1.91
PCM1-217ENST00000522998 P3H2Q8IVL5 708 aa3.14□□□□□ -1.91
PCM1-217ENST00000522998 PRR26Q8N8Z3 221 aa3.14□□□□□ -1.91
PCM1-217ENST00000522998 CENPIQ92674 756 aaPredicted RBP3.14□□□□□ -1.91
PCM1-217ENST00000522998 KAT2BQ92831 832 aa3.14□□□□□ -1.91
PCM1-217ENST00000522998 WDR83Q9BRX9 315 aaKnown RBP3.14□□□□□ -1.91
PCM1-217ENST00000522998 DCLK3Q9C098 648 aa3.14□□□□□ -1.91
PCM1-217ENST00000522998 ZNF518BQ9C0D4 1074 aa3.14□□□□□ -1.91
PCM1-217ENST00000522998 CDH19Q9H159 772 aa3.14□□□□□ -1.91
PCM1-217ENST00000522998 AAMDCQ9H7C9 122 aa3.14□□□□□ -1.91
PCM1-217ENST00000522998 SMURF2Q9HAU4 748 aa3.14□□□□□ -1.91
PCM1-217ENST00000522998 A1CFQ9NQ94 594 aaKnown RBP3.14□□□□□ -1.91
PCM1-217ENST00000522998 IPO11Q9UI26 975 aaKnown RBP3.14□□□□□ -1.91
PCM1-217ENST00000522998 PAXBP1Q9Y5B6 917 aa3.14□□□□□ -1.91
PCM1-217ENST00000522998 A0A1W2PPL8 197 aa3.13□□□□□ -1.91
PCM1-217ENST00000522998 ERI2A8K979 691 aaKnown RBP3.13□□□□□ -1.91
PCM1-217ENST00000522998 IFNA2P01563 188 aa3.13□□□□□ -1.91
PCM1-217ENST00000522998 AKAP5P24588 427 aa3.13□□□□□ -1.91
PCM1-217ENST00000522998 KLRC1P26715 233 aa3.13□□□□□ -1.91
PCM1-217ENST00000522998 PCYT1AP49585 367 aa3.13□□□□□ -1.91
PCM1-217ENST00000522998 RAE1P78406 368 aaKnown RBP3.13□□□□□ -1.91
PCM1-217ENST00000522998 COASYQ13057 564 aa3.13□□□□□ -1.91
PCM1-217ENST00000522998 STK3Q13188 491 aa3.13□□□□□ -1.91
PCM1-217ENST00000522998 NFE2Q16621 373 aaPredicted RBP3.13□□□□□ -1.91
PCM1-217ENST00000522998 ZNF718Q3SXZ3 478 aa3.13□□□□□ -1.91
PCM1-217ENST00000522998 GRAMD1CQ8IYS0 662 aa3.13□□□□□ -1.91
PCM1-217ENST00000522998 OR56A3Q8NH54 315 aa3.13□□□□□ -1.91
PCM1-217ENST00000522998 INPP5DQ92835 1189 aa3.13□□□□□ -1.91
PCM1-217ENST00000522998 HOOK2Q96ED9 719 aa3.13□□□□□ -1.91
PCM1-217ENST00000522998 HSPBAP1Q96EW2 488 aa3.13□□□□□ -1.91
PCM1-217ENST00000522998 PRR11Q96HE9 360 aaPredicted RBP3.13□□□□□ -1.91
PCM1-217ENST00000522998 ZNF668Q96K58 619 aaPredicted RBP3.13□□□□□ -1.91
PCM1-217ENST00000522998 INPP4AQ96PE3 977 aaPredicted RBP3.13□□□□□ -1.91
PCM1-217ENST00000522998 NUP88Q99567 741 aaPredicted RBP3.13□□□□□ -1.91
PCM1-217ENST00000522998 SENP7Q9BQF6 1050 aa3.13□□□□□ -1.91
PCM1-217ENST00000522998 ELOVL1Q9BW60 279 aa3.13□□□□□ -1.91
PCM1-217ENST00000522998 TTLL2Q9BWV7 592 aa3.13□□□□□ -1.91
PCM1-217ENST00000522998 GATA5Q9BWX5 397 aaPredicted RBP3.13□□□□□ -1.91
PCM1-217ENST00000522998 RTFDC1Q9BY42 306 aaPredicted RBP3.13□□□□□ -1.91
PCM1-217ENST00000522998 KRTAP4-3Q9BYR4 195 aa3.13□□□□□ -1.91
PCM1-217ENST00000522998 RHOBTB2Q9BYZ6 727 aa3.13□□□□□ -1.91
PCM1-217ENST00000522998 TASP1Q9H6P5 420 aa3.13□□□□□ -1.91
PCM1-217ENST00000522998 SIRT3Q9NTG7 399 aaPredicted RBP3.13□□□□□ -1.91
PCM1-217ENST00000522998 ASNSD1Q9NWL6 643 aa3.13□□□□□ -1.91
PCM1-217ENST00000522998 KLHL42Q9P2K6 505 aa3.13□□□□□ -1.91
PCM1-217ENST00000522998 OR6C75A6NL08 312 aa3.12□□□□□ -1.91
PCM1-217ENST00000522998 SRRM3A6NNA2 597 aaPredicted RBP3.12□□□□□ -1.91
PCM1-217ENST00000522998 SNX2O60749 519 aa3.12□□□□□ -1.91
PCM1-217ENST00000522998 RFPL1O75677 317 aa3.12□□□□□ -1.91
PCM1-217ENST00000522998 SERPINB2P05120 415 aa3.12□□□□□ -1.91
PCM1-217ENST00000522998 TMEM225BP0DP42 221 aa3.12□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms