RNA–Protein interactions for RNA: ENST00000522552.5

SKP1-209, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SKP1, Length 1,683 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-209ENST00000522552 HMOX1P09601 288 aa4.27□□□□□ -1.73
SKP1-209ENST00000522552 CCDC159P0C7I6 412 aa4.27□□□□□ -1.73
SKP1-209ENST00000522552 MSL3P1P0C860 447 aa4.27□□□□□ -1.73
SKP1-209ENST00000522552 SFTPCP11686 197 aa4.27□□□□□ -1.73
SKP1-209ENST00000522552 GLB1P16278 677 aa4.27□□□□□ -1.73
SKP1-209ENST00000522552 PRKCHP24723 683 aa4.27□□□□□ -1.73
SKP1-209ENST00000522552 HOXC8P31273 242 aa4.27□□□□□ -1.73
SKP1-209ENST00000522552 MCM7P33993 719 aa4.27□□□□□ -1.73
SKP1-209ENST00000522552 NRIP1P48552 1158 aa4.27□□□□□ -1.73
SKP1-209ENST00000522552 ARFIP1P53367 373 aa4.27□□□□□ -1.73
SKP1-209ENST00000522552 CDH15P55291 814 aa4.27□□□□□ -1.73
SKP1-209ENST00000522552 RRP1P56182 461 aaKnown RBP4.27□□□□□ -1.73
SKP1-209ENST00000522552 WNT3P56703 355 aa4.27□□□□□ -1.73
SKP1-209ENST00000522552 TMEM115Q12893 351 aaPredicted RBP4.27□□□□□ -1.73
SKP1-209ENST00000522552 BOP1Q14137 746 aaKnown RBP4.27□□□□□ -1.73
SKP1-209ENST00000522552 RABEP1Q15276 862 aa4.27□□□□□ -1.73
SKP1-209ENST00000522552 DGKDQ16760 1214 aa4.27□□□□□ -1.73
SKP1-209ENST00000522552 PABPC1LQ4VXU2 614 aaKnown RBP4.27□□□□□ -1.73
SKP1-209ENST00000522552 GLRA4Q5JXX5 417 aa4.27□□□□□ -1.73
SKP1-209ENST00000522552 MANEALQ5VSG8 457 aa4.27□□□□□ -1.73
SKP1-209ENST00000522552 DCP2Q8IU60 420 aaKnown RBP4.27□□□□□ -1.73
SKP1-209ENST00000522552 WFDC3Q8IUB2 231 aa4.27□□□□□ -1.73
SKP1-209ENST00000522552 LILRA3Q8N6C8 439 aaPredicted RBP4.27□□□□□ -1.73
SKP1-209ENST00000522552 SYT2Q8N9I0 419 aaPredicted RBP4.27□□□□□ -1.73
SKP1-209ENST00000522552 PIK3C3Q8NEB9 887 aa4.27□□□□□ -1.73
SKP1-209ENST00000522552 SETD6Q8TBK2 473 aa4.27□□□□□ -1.73
SKP1-209ENST00000522552 MRPS27Q92552 414 aaKnown RBP4.27□□□□□ -1.73
SKP1-209ENST00000522552 ARHGEF2Q92974 986 aaKnown RBP4.27□□□□□ -1.73
SKP1-209ENST00000522552 UBE2FQ969M7 185 aa4.27□□□□□ -1.73
SKP1-209ENST00000522552 TP53INP1Q96A56 240 aa4.27□□□□□ -1.73
SKP1-209ENST00000522552 PDLIM5Q96HC4 596 aaKnown RBP4.27□□□□□ -1.73
SKP1-209ENST00000522552 HHIPL1Q96JK4 782 aa4.27□□□□□ -1.73
SKP1-209ENST00000522552 ALPK1Q96QP1 1244 aa4.27□□□□□ -1.73
SKP1-209ENST00000522552 WDR24Q96S15 920 aa4.27□□□□□ -1.73
SKP1-209ENST00000522552 TUBB6Q9BUF5 446 aa4.27□□□□□ -1.73
SKP1-209ENST00000522552 AKTIPQ9H8T0 292 aa4.27□□□□□ -1.73
SKP1-209ENST00000522552 BARX1Q9HBU1 254 aaPredicted RBP4.27□□□□□ -1.73
SKP1-209ENST00000522552 XPNPEP3Q9NQH7 507 aa4.27□□□□□ -1.73
SKP1-209ENST00000522552 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP4.27□□□□□ -1.732e-6■□□□□ 8.4
SKP1-209ENST00000522552 POLR3BQ9NW08 1133 aaPredicted RBP4.27□□□□□ -1.73
SKP1-209ENST00000522552 LMCD1Q9NZU5 365 aa4.27□□□□□ -1.73
SKP1-209ENST00000522552 ACTR3BQ9P1U1 418 aa4.27□□□□□ -1.73
SKP1-209ENST00000522552 TNFRSF10DQ9UBN6 386 aa4.27□□□□□ -1.73
SKP1-209ENST00000522552 DNAI1Q9UI46 699 aa4.27□□□□□ -1.73
SKP1-209ENST00000522552 ANGPTL3Q9Y5C1 460 aa4.27□□□□□ -1.73
SKP1-209ENST00000522552 FAM237BA0A1B0GVD1 139 aa4.26□□□□□ -1.73
SKP1-209ENST00000522552 A0A1W2PQ45 241 aaPredicted RBP4.26□□□□□ -1.73
SKP1-209ENST00000522552 A0A1W2PQY0 241 aa4.26□□□□□ -1.73
SKP1-209ENST00000522552 GAGE10A6NGK3 116 aa4.26□□□□□ -1.73
SKP1-209ENST00000522552 AQP7P3A6NL99 342 aa4.26□□□□□ -1.73
SKP1-209ENST00000522552 F8W735 103 aaPredicted RBP4.26□□□□□ -1.73
SKP1-209ENST00000522552 SYN3O14994 580 aa4.26□□□□□ -1.73
SKP1-209ENST00000522552 STX6O43752 255 aa4.26□□□□□ -1.73
SKP1-209ENST00000522552 CCNT2O60583 730 aaKnown RBP4.26□□□□□ -1.73
SKP1-209ENST00000522552 SEC14L2O76054 403 aa4.26□□□□□ -1.73
SKP1-209ENST00000522552 WEE2P0C1S8 567 aa4.26□□□□□ -1.73
SKP1-209ENST00000522552 SUPT20HL2P0C7V6 817 aa4.26□□□□□ -1.73
SKP1-209ENST00000522552 PIM1P11309 404 aaPredicted RBP4.26□□□□□ -1.73
SKP1-209ENST00000522552 TNNT1P13805 278 aa4.26□□□□□ -1.73
SKP1-209ENST00000522552 FDPSP14324 419 aaKnown RBP4.26□□□□□ -1.73
SKP1-209ENST00000522552 PBLDP30039 288 aaPredicted RBP4.26□□□□□ -1.73
SKP1-209ENST00000522552 MSX2P35548 267 aaPredicted RBP4.26□□□□□ -1.73
SKP1-209ENST00000522552 EGR3Q06889 387 aa4.26□□□□□ -1.73
SKP1-209ENST00000522552 NKPD1Q17RQ9 610 aa4.26□□□□□ -1.73
SKP1-209ENST00000522552 ALG11Q2TAA5 492 aa4.26□□□□□ -1.73
SKP1-209ENST00000522552 SUPT20HL1Q3ZLR7 823 aa4.26□□□□□ -1.73
SKP1-209ENST00000522552 PLA1AQ53H76 456 aa4.26□□□□□ -1.73
SKP1-209ENST00000522552 ZRANB3Q5FWF4 1079 aa4.26□□□□□ -1.73
SKP1-209ENST00000522552 ZNF766Q5HY98 468 aa4.26□□□□□ -1.73
SKP1-209ENST00000522552 KANK2Q63ZY3 851 aa4.26□□□□□ -1.73
SKP1-209ENST00000522552 WDR93Q6P2C0 686 aa4.26□□□□□ -1.73
SKP1-209ENST00000522552 TMEM154Q6P9G4 183 aa4.26□□□□□ -1.73
SKP1-209ENST00000522552 RABEPKQ7Z6M1 372 aa4.26□□□□□ -1.73
SKP1-209ENST00000522552 RALYLQ86SE5 291 aaKnown RBP4.26□□□□□ -1.73
SKP1-209ENST00000522552 ADGRG6Q86SQ4 1221 aa4.26□□□□□ -1.73
SKP1-209ENST00000522552 FAM217AQ8IXS0 508 aa4.26□□□□□ -1.73
SKP1-209ENST00000522552 PEX5LQ8IYB4 626 aa4.26□□□□□ -1.73
SKP1-209ENST00000522552 RNF168Q8IYW5 571 aaPredicted RBP4.26□□□□□ -1.73
SKP1-209ENST00000522552 FSIP1Q8NA03 581 aa4.26□□□□□ -1.73
SKP1-209ENST00000522552 IL17RCQ8NAC3 791 aa4.26□□□□□ -1.73
SKP1-209ENST00000522552 CEP76Q8TAP6 659 aa4.26□□□□□ -1.73
SKP1-209ENST00000522552 DUSP19Q8WTR2 217 aa4.26□□□□□ -1.73
SKP1-209ENST00000522552 KCNE4Q8WWG9 221 aa4.26□□□□□ -1.73
SKP1-209ENST00000522552 SAAL1Q96ER3 474 aa4.26□□□□□ -1.73
SKP1-209ENST00000522552 MCRS1Q96EZ8 462 aa4.26□□□□□ -1.73
SKP1-209ENST00000522552 MEGF10Q96KG7 1140 aa4.26□□□□□ -1.73
SKP1-209ENST00000522552 FAM84AQ96KN4 292 aa4.26□□□□□ -1.73
SKP1-209ENST00000522552 FAM227BQ96M60 508 aa4.26□□□□□ -1.73
SKP1-209ENST00000522552 NAA11Q9BSU3 229 aaPredicted RBP4.26□□□□□ -1.73
SKP1-209ENST00000522552 CRACR2AQ9BSW2 395 aa4.26□□□□□ -1.73
SKP1-209ENST00000522552 KRT23Q9C075 422 aa4.26□□□□□ -1.73
SKP1-209ENST00000522552 FAM83DQ9H4H8 585 aa4.26□□□□□ -1.73
SKP1-209ENST00000522552 MROH8Q9H579 483 aa4.26□□□□□ -1.73
SKP1-209ENST00000522552 PFDN4Q9NQP4 134 aa4.26□□□□□ -1.73
SKP1-209ENST00000522552 SIRT3Q9NTG7 399 aaPredicted RBP4.26□□□□□ -1.73
SKP1-209ENST00000522552 LIN7CQ9NUP9 197 aaKnown RBP4.26□□□□□ -1.73
SKP1-209ENST00000522552 RLIMQ9NVW2 624 aa4.26□□□□□ -1.73
SKP1-209ENST00000522552 TAS2R3Q9NYW6 316 aa4.26□□□□□ -1.73
SKP1-209ENST00000522552 IMPACTQ9P2X3 320 aa4.26□□□□□ -1.73
SKP1-209ENST00000522552 HPCAL4Q9UM19 191 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms