RNA–Protein interactions for RNA: ENST00000522353.2

PCDHA3-201, Transcript of protocadherin alpha 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA3, Length 5,260 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3-201ENST00000522353 ELOVL6Q9H5J4 265 aa16.69■□□□□ 0.26
PCDHA3-201ENST00000522353 MARCH2Q9P0N8 246 aa16.69■□□□□ 0.26
PCDHA3-201ENST00000522353 TNFSF13BQ9Y275 285 aa16.69■□□□□ 0.26
PCDHA3-201ENST00000522353 TM4SF1P30408 202 aa16.69■□□□□ 0.26
PCDHA3-201ENST00000522353 GUCA1AP43080 201 aaPredicted RBP16.69■□□□□ 0.26
PCDHA3-201ENST00000522353 NR2C2P49116 596 aa16.69■□□□□ 0.26
PCDHA3-201ENST00000522353 SLC6A3Q01959 620 aa16.69■□□□□ 0.26
PCDHA3-201ENST00000522353 BCL2L1Q07817 233 aa16.69■□□□□ 0.26
PCDHA3-201ENST00000522353 CYTH1Q15438 398 aa16.69■□□□□ 0.26
PCDHA3-201ENST00000522353 MTSS1LQ765P7 747 aa16.69■□□□□ 0.26
PCDHA3-201ENST00000522353 NT5DC3Q86UY8 548 aa16.69■□□□□ 0.26
PCDHA3-201ENST00000522353 ARID3BQ8IVW6 561 aaPredicted RBP16.69■□□□□ 0.26
PCDHA3-201ENST00000522353 APPL1Q9UKG1 709 aa16.69■□□□□ 0.26
PCDHA3-201ENST00000522353 FAM50BQ9Y247 325 aa16.69■□□□□ 0.26
PCDHA3-201ENST00000522353 TBC1D3BA6NDS4 549 aa16.69■□□□□ 0.26
PCDHA3-201ENST00000522353 TMEM88BA6NKF7 163 aa16.69■□□□□ 0.26
PCDHA3-201ENST00000522353 ADH1AP07327 375 aa16.69■□□□□ 0.26
PCDHA3-201ENST00000522353 CYP2A7P20853 494 aa16.69■□□□□ 0.26
PCDHA3-201ENST00000522353 MGAT5Q09328 741 aa16.69■□□□□ 0.26
PCDHA3-201ENST00000522353 PLPPR4Q7Z2D5 763 aa16.69■□□□□ 0.26
PCDHA3-201ENST00000522353 ZNF571Q7Z3V5 609 aaPredicted RBP16.69■□□□□ 0.26
PCDHA3-201ENST00000522353 CCDC33Q8N5R6 958 aa16.69■□□□□ 0.26
PCDHA3-201ENST00000522353 PPP1R16AQ96I34 528 aa16.69■□□□□ 0.26
PCDHA3-201ENST00000522353 C2orf49Q9BVC5 232 aaPredicted RBP16.69■□□□□ 0.26
PCDHA3-201ENST00000522353 ACTR8Q9H981 624 aa16.69■□□□□ 0.26
PCDHA3-201ENST00000522353 SEPT3Q9UH03 358 aa16.69■□□□□ 0.26
PCDHA3-201ENST00000522353 HALP42357 657 aa16.68■□□□□ 0.26
PCDHA3-201ENST00000522353 DIS3LQ8TF46 1054 aaKnown RBP16.68■□□□□ 0.26
PCDHA3-201ENST00000522353 BTN2A2Q8WVV5 523 aa16.68■□□□□ 0.26
PCDHA3-201ENST00000522353 TMEM121Q9BTD3 319 aa16.68■□□□□ 0.26
PCDHA3-201ENST00000522353 YIPF3Q9GZM5 350 aa16.68■□□□□ 0.26
PCDHA3-201ENST00000522353 UBA2Q9UBT2 640 aaPredicted RBP16.68■□□□□ 0.26
PCDHA3-201ENST00000522353 NCF1BA6NI72 391 aaPredicted RBP16.68■□□□□ 0.26
PCDHA3-201ENST00000522353 NCF1CA8MVU1 366 aaPredicted RBP16.68■□□□□ 0.26
PCDHA3-201ENST00000522353 NCF1P14598 390 aaPredicted RBP16.68■□□□□ 0.26
PCDHA3-201ENST00000522353 SKP1P63208 163 aa16.68■□□□□ 0.26
PCDHA3-201ENST00000522353 NOMO2Q5JPE7 1267 aa16.68■□□□□ 0.26
PCDHA3-201ENST00000522353 CHMP1BQ7LBR1 199 aa16.68■□□□□ 0.26
PCDHA3-201ENST00000522353 VAT1Q99536 393 aa16.68■□□□□ 0.26
PCDHA3-201ENST00000522353 NLNQ9BYT8 704 aa16.68■□□□□ 0.26
PCDHA3-201ENST00000522353 PRDM16Q9HAZ2 1276 aa16.68■□□□□ 0.26
PCDHA3-201ENST00000522353 ASAH2Q9NR71 780 aa16.68■□□□□ 0.26
PCDHA3-201ENST00000522353 TUBGCP4Q9UGJ1 667 aa16.68■□□□□ 0.26
PCDHA3-201ENST00000522353 SOX13Q9UN79 622 aa16.68■□□□□ 0.26
PCDHA3-201ENST00000522353 RASSF10A6NK89 507 aa16.68■□□□□ 0.26
PCDHA3-201ENST00000522353 MLH1P40692 756 aa16.68■□□□□ 0.26
PCDHA3-201ENST00000522353 RFX3P48380 749 aa16.68■□□□□ 0.26
PCDHA3-201ENST00000522353 RD3Q7Z3Z2 195 aa16.68■□□□□ 0.26
PCDHA3-201ENST00000522353 SLC26A11Q86WA9 606 aa16.68■□□□□ 0.26
PCDHA3-201ENST00000522353 DTX3LQ8TDB6 740 aa16.68■□□□□ 0.26
PCDHA3-201ENST00000522353 FAM111AQ96PZ2 611 aa16.68■□□□□ 0.26
PCDHA3-201ENST00000522353 KRCC1Q9NPI7 259 aaPredicted RBP16.68■□□□□ 0.26
PCDHA3-201ENST00000522353 CTNNAL1Q9UBT7 734 aa16.68■□□□□ 0.26
PCDHA3-201ENST00000522353 TRAV19A0A0A6YYK7 116 aa16.68■□□□□ 0.26
PCDHA3-201ENST00000522353 PIK3CDO00329 1044 aa16.68■□□□□ 0.26
PCDHA3-201ENST00000522353 EML1O00423 815 aa16.68■□□□□ 0.26
PCDHA3-201ENST00000522353 SEC24DO94855 1032 aaPredicted RBP16.68■□□□□ 0.26
PCDHA3-201ENST00000522353 BMP10O95393 424 aa16.68■□□□□ 0.26
PCDHA3-201ENST00000522353 TPBGLP0DKB5 382 aa16.68■□□□□ 0.26
PCDHA3-201ENST00000522353 CYP2C18P33260 490 aa16.68■□□□□ 0.26
PCDHA3-201ENST00000522353 KRT20P35900 424 aa16.68■□□□□ 0.26
PCDHA3-201ENST00000522353 HIRAP54198 1017 aaPredicted RBP16.68■□□□□ 0.26
PCDHA3-201ENST00000522353 KHDRBS2Q5VWX1 349 aaKnown RBP16.68■□□□□ 0.26
PCDHA3-201ENST00000522353 PALB2Q86YC2 1186 aa16.68■□□□□ 0.26
PCDHA3-201ENST00000522353 ZFYVE19Q96K21 471 aa16.68■□□□□ 0.26
PCDHA3-201ENST00000522353 NCKIPSDQ9NZQ3 722 aa16.68■□□□□ 0.26
PCDHA3-201ENST00000522353 GNG14A0A1W2PPG7 69 aa16.67■□□□□ 0.26
PCDHA3-201ENST00000522353 OTOAQ7RTW8 1153 aa16.67■□□□□ 0.26
PCDHA3-201ENST00000522353 C10orf53Q8N6V4 93 aa16.67■□□□□ 0.26
PCDHA3-201ENST00000522353 APBB2Q92870 758 aa16.67■□□□□ 0.26
PCDHA3-201ENST00000522353 PCDH9Q9HC56 1237 aa16.67■□□□□ 0.26
PCDHA3-201ENST00000522353 MRPS23Q9Y3D9 190 aaKnown RBP16.67■□□□□ 0.26
PCDHA3-201ENST00000522353 RARGP13631 454 aa16.67■□□□□ 0.26
PCDHA3-201ENST00000522353 HSD17B3P37058 310 aa16.67■□□□□ 0.26
PCDHA3-201ENST00000522353 PSEN1P49768 467 aa16.67■□□□□ 0.26
PCDHA3-201ENST00000522353 CBWD3Q5JTY5 395 aa16.67■□□□□ 0.26
PCDHA3-201ENST00000522353 CBWD5Q5RIA9 395 aa16.67■□□□□ 0.26
PCDHA3-201ENST00000522353 VGLL2Q8N8G2 317 aa16.67■□□□□ 0.26
PCDHA3-201ENST00000522353 KIAA0895Q8NCT3 520 aa16.67■□□□□ 0.26
PCDHA3-201ENST00000522353 ACTRT1Q8TDG2 376 aa16.67■□□□□ 0.26
PCDHA3-201ENST00000522353 NSL1Q96IY1 281 aa16.67■□□□□ 0.26
PCDHA3-201ENST00000522353 TMEM150BA6NC51 233 aa16.67■□□□□ 0.26
PCDHA3-201ENST00000522353 SLCO1B7G3V0H7 640 aa16.67■□□□□ 0.26
PCDHA3-201ENST00000522353 UBXN8O00124 270 aa16.67■□□□□ 0.26
PCDHA3-201ENST00000522353 SPTLC1O15269 473 aa16.67■□□□□ 0.26
PCDHA3-201ENST00000522353 KRT6AP02538 564 aa16.67■□□□□ 0.26
PCDHA3-201ENST00000522353 KRT6BP04259 564 aa16.67■□□□□ 0.26
PCDHA3-201ENST00000522353 OR56A5P0C7T3 313 aa16.67■□□□□ 0.26
PCDHA3-201ENST00000522353 CSH1P0DML2 217 aa16.67■□□□□ 0.26
PCDHA3-201ENST00000522353 CSH2P0DML3 217 aa16.67■□□□□ 0.26
PCDHA3-201ENST00000522353 FGFR1P11362 822 aa16.67■□□□□ 0.26
PCDHA3-201ENST00000522353 KRT6CP48668 564 aa16.67■□□□□ 0.26
PCDHA3-201ENST00000522353 CCL23P55773 120 aa16.67■□□□□ 0.26
PCDHA3-201ENST00000522353 HECTD3Q5T447 861 aa16.67■□□□□ 0.26
PCDHA3-201ENST00000522353 PTAR1Q7Z6K3 402 aaPredicted RBP16.67■□□□□ 0.26
PCDHA3-201ENST00000522353 CASP10Q92851 521 aa16.67■□□□□ 0.26
PCDHA3-201ENST00000522353 IL1RL2Q9HB29 575 aa16.67■□□□□ 0.26
PCDHA3-201ENST00000522353 SKAP2O75563 359 aaPredicted RBP16.67■□□□□ 0.26
PCDHA3-201ENST00000522353 SERPINA4P29622 427 aa16.67■□□□□ 0.26
PCDHA3-201ENST00000522353 THOP1P52888 689 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms