RNA–Protein interactions for RNA: ENST00000522136.5

CLK4-210, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 1,955 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-210ENST00000522136 TUBP50607 506 aa13.92□□□□□ -0.18
CLK4-210ENST00000522136 TBX4P57082 545 aa13.92□□□□□ -0.18
CLK4-210ENST00000522136 ZNF211Q13398 564 aaPredicted RBP13.92□□□□□ -0.18
CLK4-210ENST00000522136 CA9Q16790 459 aa13.92□□□□□ -0.18
CLK4-210ENST00000522136 CTC1Q2NKJ3 1217 aa13.92□□□□□ -0.18
CLK4-210ENST00000522136 DNTTIP2Q5QJE6 756 aaKnown RBP13.92□□□□□ -0.18
CLK4-210ENST00000522136 ZFYVE27Q5T4F4 411 aa13.92□□□□□ -0.18
CLK4-210ENST00000522136 GPR158Q5T848 1215 aa13.92□□□□□ -0.18
CLK4-210ENST00000522136 DCAF12L1Q5VU92 463 aa13.92□□□□□ -0.18
CLK4-210ENST00000522136 ZNF276Q8N554 614 aa13.92□□□□□ -0.18
CLK4-210ENST00000522136 HSPH1Q92598 858 aa13.92□□□□□ -0.18
CLK4-210ENST00000522136 SERPINB11Q96P15 392 aa13.92□□□□□ -0.18
CLK4-210ENST00000522136 SNRNP25Q9BV90 132 aaKnown RBP13.92□□□□□ -0.18
CLK4-210ENST00000522136 WDCPQ9H6R7 721 aa13.92□□□□□ -0.18
CLK4-210ENST00000522136 SMPD4Q9NXE4 827 aa13.92□□□□□ -0.18
CLK4-210ENST00000522136 SZT2Q5T011 3432 aa13.91□□□□□ -0.18
CLK4-210ENST00000522136 CCDC66A2RUB6 948 aa13.91□□□□□ -0.18
CLK4-210ENST00000522136 MIF4GDA9UHW6 222 aaKnown RBP13.91□□□□□ -0.18
CLK4-210ENST00000522136 KCNK3O14649 394 aa13.91□□□□□ -0.18
CLK4-210ENST00000522136 PSTPIP1O43586 416 aa13.91□□□□□ -0.18
CLK4-210ENST00000522136 SRGAP2BP0DMP2 458 aa13.91□□□□□ -0.18
CLK4-210ENST00000522136 MBL2P11226 248 aaPredicted RBP13.91□□□□□ -0.18
CLK4-210ENST00000522136 CEBPBP17676 345 aa13.91□□□□□ -0.18
CLK4-210ENST00000522136 KCNQ1P51787 676 aa13.91□□□□□ -0.18
CLK4-210ENST00000522136 CBX2Q14781 532 aaPredicted RBP13.91□□□□□ -0.18
CLK4-210ENST00000522136 LLGL1Q15334 1064 aa13.91□□□□□ -0.18
CLK4-210ENST00000522136 TRIP4Q15650 581 aaPredicted RBP13.91□□□□□ -0.18
CLK4-210ENST00000522136 CCDC85BQ15834 202 aaPredicted RBP13.91□□□□□ -0.18
CLK4-210ENST00000522136 HABP4Q5JVS0 413 aaKnown RBP13.91□□□□□ -0.18
CLK4-210ENST00000522136 PAPD7Q5XG87 772 aaKnown RBP13.91□□□□□ -0.18
CLK4-210ENST00000522136 SND1Q7KZF4 910 aaKnown RBP eCLIP13.91□□□□□ -0.18
CLK4-210ENST00000522136 GPR149Q86SP6 731 aa13.91□□□□□ -0.18
CLK4-210ENST00000522136 PYROXD2Q8N2H3 581 aa13.91□□□□□ -0.18
CLK4-210ENST00000522136 UBL4BQ8N7F7 174 aa13.91□□□□□ -0.18
CLK4-210ENST00000522136 KIF18AQ8NI77 898 aa13.91□□□□□ -0.18
CLK4-210ENST00000522136 RAPGEF5Q92565 580 aa13.91□□□□□ -0.18
CLK4-210ENST00000522136 WBP2Q969T9 261 aa13.91□□□□□ -0.18
CLK4-210ENST00000522136 FCRL2Q96LA5 508 aaPredicted RBP13.91□□□□□ -0.18
CLK4-210ENST00000522136 CDK5RAP1Q96SZ6 601 aaKnown RBP13.91□□□□□ -0.18
CLK4-210ENST00000522136 CDX2Q99626 313 aaPredicted RBP13.91□□□□□ -0.18
CLK4-210ENST00000522136 TKTL2Q9H0I9 626 aa13.91□□□□□ -0.18
CLK4-210ENST00000522136 SMG9Q9H0W8 520 aaKnown RBP13.91□□□□□ -0.18
CLK4-210ENST00000522136 SNX12Q9UMY4 172 aa13.91□□□□□ -0.18
CLK4-210ENST00000522136 TLR6Q9Y2C9 796 aa13.91□□□□□ -0.18
CLK4-210ENST00000522136 MRPS23Q9Y3D9 190 aaKnown RBP13.91□□□□□ -0.18
CLK4-210ENST00000522136 SNX10Q9Y5X0 201 aa13.91□□□□□ -0.18
CLK4-210ENST00000522136 ZNF185O15231 689 aa13.91□□□□□ -0.18
CLK4-210ENST00000522136 FGF19O95750 216 aa13.91□□□□□ -0.18
CLK4-210ENST00000522136 TUBB4AP04350 444 aa13.91□□□□□ -0.18
CLK4-210ENST00000522136 PYGMP11217 842 aa13.91□□□□□ -0.18
CLK4-210ENST00000522136 ADRA1BP35368 520 aa13.91□□□□□ -0.18
CLK4-210ENST00000522136 ZXDBP98169 803 aa13.91□□□□□ -0.18
CLK4-210ENST00000522136 CLUL1Q15846 466 aa13.91□□□□□ -0.18
CLK4-210ENST00000522136 ERMARDQ5T6L9 678 aa13.91□□□□□ -0.18
CLK4-210ENST00000522136 LRRC38Q5VT99 294 aa13.91□□□□□ -0.18
CLK4-210ENST00000522136 KLHDC10Q6PID8 442 aa13.91□□□□□ -0.18
CLK4-210ENST00000522136 ANKS1BQ7Z6G8 1248 aa13.91□□□□□ -0.18
CLK4-210ENST00000522136 TADA2BQ86TJ2 420 aa13.91□□□□□ -0.18
CLK4-210ENST00000522136 LEMD2Q8NC56 503 aa13.91□□□□□ -0.18
CLK4-210ENST00000522136 COG1Q8WTW3 980 aa13.91□□□□□ -0.18
CLK4-210ENST00000522136 RNF25Q96BH1 459 aaPredicted RBP13.91□□□□□ -0.18
CLK4-210ENST00000522136 SLC39A13Q96H72 371 aa13.91□□□□□ -0.18
CLK4-210ENST00000522136 ZSWIM3Q96MP5 696 aa13.91□□□□□ -0.18
CLK4-210ENST00000522136 OSBPL9Q96SU4 736 aa13.91□□□□□ -0.18
CLK4-210ENST00000522136 NCAPGQ9BPX3 1015 aa13.91□□□□□ -0.18
CLK4-210ENST00000522136 KLF16Q9BXK1 252 aaPredicted RBP13.91□□□□□ -0.18
CLK4-210ENST00000522136 S1PR5Q9H228 398 aa13.91□□□□□ -0.18
CLK4-210ENST00000522136 XPO7Q9UIA9 1087 aaKnown RBP13.91□□□□□ -0.18
CLK4-210ENST00000522136 FZD10Q9ULW2 581 aa13.91□□□□□ -0.18
CLK4-210ENST00000522136 ZNF197O14709 1029 aa13.9□□□□□ -0.18
CLK4-210ENST00000522136 URI1O94763 535 aaPredicted RBP13.9□□□□□ -0.18
CLK4-210ENST00000522136 OLFM2O95897 454 aa13.9□□□□□ -0.18
CLK4-210ENST00000522136 MOCS2O96007 188 aaPredicted RBP13.9□□□□□ -0.18
CLK4-210ENST00000522136 KRT1P04264 644 aa13.9□□□□□ -0.18
CLK4-210ENST00000522136 KRT7P08729 469 aa13.9□□□□□ -0.18
CLK4-210ENST00000522136 CD48P09326 243 aa13.9□□□□□ -0.18
CLK4-210ENST00000522136 IRF1P10914 325 aa13.9□□□□□ -0.18
CLK4-210ENST00000522136 GGCXP38435 758 aa13.9□□□□□ -0.18
CLK4-210ENST00000522136 RWDD2BP57060 319 aa13.9□□□□□ -0.18
CLK4-210ENST00000522136 AMPD2Q01433 879 aa13.9□□□□□ -0.18
CLK4-210ENST00000522136 POLNQ7Z5Q5 900 aa13.9□□□□□ -0.18
CLK4-210ENST00000522136 TTC16Q8NEE8 873 aa13.9□□□□□ -0.18
CLK4-210ENST00000522136 ZFRQ96KR1 1074 aaKnown RBP13.9□□□□□ -0.18
CLK4-210ENST00000522136 SLITRK6Q9H5Y7 841 aa13.9□□□□□ -0.18
CLK4-210ENST00000522136 DHX35Q9H5Z1 703 aaKnown RBP13.9□□□□□ -0.18
CLK4-210ENST00000522136 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.9□□□□□ -0.18
CLK4-210ENST00000522136 AP4E1Q9UPM8 1137 aa13.9□□□□□ -0.18
CLK4-210ENST00000522136 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.9□□□□□ -0.18
CLK4-210ENST00000522136 CPQQ9Y646 472 aa13.9□□□□□ -0.18
CLK4-210ENST00000522136 TRAV19A0A0A6YYK7 116 aa13.89□□□□□ -0.19
CLK4-210ENST00000522136 SCAMP3O14828 347 aaKnown RBP13.89□□□□□ -0.19
CLK4-210ENST00000522136 IGLV3-27P01718 113 aa13.89□□□□□ -0.19
CLK4-210ENST00000522136 CKMP06732 381 aa13.89□□□□□ -0.19
CLK4-210ENST00000522136 HOXB8P17481 243 aaPredicted RBP13.89□□□□□ -0.19
CLK4-210ENST00000522136 CCR1P32246 355 aa13.89□□□□□ -0.19
CLK4-210ENST00000522136 ARHGAP15Q53QZ3 475 aa13.89□□□□□ -0.19
CLK4-210ENST00000522136 BOLA3Q53S33 107 aa13.89□□□□□ -0.19
CLK4-210ENST00000522136 KATNAL2Q8IYT4 538 aa13.89□□□□□ -0.19
CLK4-210ENST00000522136 DEFB123Q8N688 67 aa13.89□□□□□ -0.19
CLK4-210ENST00000522136 ADAMTS19Q8TE59 1207 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms