RNA–Protein interactions for RNA: ENST00000520909.5

CLK4-207, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 1,305 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-207ENST00000520909 NCOA3Q9Y6Q9 1424 aa4.95□□□□□ -1.62
CLK4-207ENST00000520909 NOTCH4Q99466 2003 aa4.95□□□□□ -1.62
CLK4-207ENST00000520909 A0A087WWL8 130 aa4.95□□□□□ -1.62
CLK4-207ENST00000520909 ALDH2P05091 517 aa4.95□□□□□ -1.62
CLK4-207ENST00000520909 RHDQ02161 417 aa4.95□□□□□ -1.62
CLK4-207ENST00000520909 MTX1Q13505 466 aa4.95□□□□□ -1.62
CLK4-207ENST00000520909 FGL2Q14314 439 aa4.95□□□□□ -1.62
CLK4-207ENST00000520909 KCNB1Q14721 858 aa4.95□□□□□ -1.62
CLK4-207ENST00000520909 ZNF750Q32MQ0 723 aa4.95□□□□□ -1.62
CLK4-207ENST00000520909 TMEM240Q5SV17 173 aa4.95□□□□□ -1.62
CLK4-207ENST00000520909 RNF187Q5TA31 235 aaPredicted RBP4.95□□□□□ -1.62
CLK4-207ENST00000520909 C18orf65Q6ZTR6 163 aa4.95□□□□□ -1.62
CLK4-207ENST00000520909 RAPGEF4Q8WZA2 1011 aa4.95□□□□□ -1.62
CLK4-207ENST00000520909 CTHRC1Q96CG8 243 aa4.95□□□□□ -1.62
CLK4-207ENST00000520909 COG3Q96JB2 828 aa4.95□□□□□ -1.62
CLK4-207ENST00000520909 CAMK1GQ96NX5 476 aa4.95□□□□□ -1.62
CLK4-207ENST00000520909 MAP3K14Q99558 947 aa4.95□□□□□ -1.62
CLK4-207ENST00000520909 CGRRF1Q99675 332 aa4.95□□□□□ -1.62
CLK4-207ENST00000520909 ZPBPQ9BS86 351 aa4.95□□□□□ -1.62
CLK4-207ENST00000520909 CDC42BPGQ6DT37 1551 aa4.94□□□□□ -1.62
CLK4-207ENST00000520909 CYSRT1A8MQ03 144 aa4.94□□□□□ -1.62
CLK4-207ENST00000520909 PPM1GO15355 546 aaPredicted RBP4.94□□□□□ -1.62
CLK4-207ENST00000520909 TMPRSS11DO60235 418 aa4.94□□□□□ -1.62
CLK4-207ENST00000520909 EPHA3P29320 983 aa4.94□□□□□ -1.62
CLK4-207ENST00000520909 CPA2P48052 419 aa4.94□□□□□ -1.62
CLK4-207ENST00000520909 MTHFSP49914 203 aa4.94□□□□□ -1.62
CLK4-207ENST00000520909 EVA1CP58658 441 aa4.94□□□□□ -1.62
CLK4-207ENST00000520909 CTBP1Q13363 440 aa4.94□□□□□ -1.62
CLK4-207ENST00000520909 WDR43Q15061 677 aaKnown RBP eCLIP4.94□□□□□ -1.62
CLK4-207ENST00000520909 ZNF783Q6ZMS7 281 aa4.94□□□□□ -1.62
CLK4-207ENST00000520909 KRT28Q7Z3Y7 464 aa4.94□□□□□ -1.62
CLK4-207ENST00000520909 PELI3Q8N2H9 469 aa4.94□□□□□ -1.62
CLK4-207ENST00000520909 PLBD2Q8NHP8 589 aa4.94□□□□□ -1.62
CLK4-207ENST00000520909 CFAP53Q96M91 514 aa4.94□□□□□ -1.62
CLK4-207ENST00000520909 SLCO5A1Q9H2Y9 848 aa4.94□□□□□ -1.62
CLK4-207ENST00000520909 ICKQ9UPZ9 632 aa4.94□□□□□ -1.62
CLK4-207ENST00000520909 TTC21AQ8NDW8 1320 aa4.94□□□□□ -1.62
CLK4-207ENST00000520909 POLR3AO14802 1390 aaPredicted RBP4.93□□□□□ -1.62
CLK4-207ENST00000520909 USP6P35125 1406 aa4.93□□□□□ -1.62
CLK4-207ENST00000520909 C1orf167Q5SNV9 1468 aa4.93□□□□□ -1.62
CLK4-207ENST00000520909 LRRC7Q96NW7 1537 aa4.93□□□□□ -1.62
CLK4-207ENST00000520909 NALCNQ8IZF0 1738 aa4.93□□□□□ -1.62
CLK4-207ENST00000520909 STRCP1A6NGW2 1772 aa4.93□□□□□ -1.62
CLK4-207ENST00000520909 IGLV5-39A0A0G2JS06 123 aa4.93□□□□□ -1.62
CLK4-207ENST00000520909 CLIC1O00299 241 aa4.93□□□□□ -1.62
CLK4-207ENST00000520909 CENPBP07199 599 aaPredicted RBP4.93□□□□□ -1.62
CLK4-207ENST00000520909 ATF7P17544 494 aaPredicted RBP4.93□□□□□ -1.62
CLK4-207ENST00000520909 VCAM1P19320 739 aa4.93□□□□□ -1.62
CLK4-207ENST00000520909 MT3P25713 68 aa4.93□□□□□ -1.62
CLK4-207ENST00000520909 TACR3P29371 465 aa4.93□□□□□ -1.62
CLK4-207ENST00000520909 YPEL5P62699 121 aa4.93□□□□□ -1.62
CLK4-207ENST00000520909 CFHR3Q02985 330 aa4.93□□□□□ -1.62
CLK4-207ENST00000520909 MANEAQ5SRI9 462 aa4.93□□□□□ -1.62
CLK4-207ENST00000520909 MPP5Q8N3R9 675 aa4.93□□□□□ -1.62
CLK4-207ENST00000520909 ZBTB8BQ8NAP8 495 aaPredicted RBP4.93□□□□□ -1.62
CLK4-207ENST00000520909 C1GALT1C1Q96EU7 318 aa4.93□□□□□ -1.62
CLK4-207ENST00000520909 VN1R3Q9BXE9 311 aa4.93□□□□□ -1.62
CLK4-207ENST00000520909 STAP2Q9UGK3 403 aa4.93□□□□□ -1.62
CLK4-207ENST00000520909 LUC7L2Q9Y383 392 aaKnown RBP4.93□□□□□ -1.62
CLK4-207ENST00000520909 DCCP43146 1447 aa4.92□□□□□ -1.62
CLK4-207ENST00000520909 USP32Q8NFA0 1604 aa4.92□□□□□ -1.62
CLK4-207ENST00000520909 FMN2Q9NZ56 1722 aa4.92□□□□□ -1.62
CLK4-207ENST00000520909 A0A088AWK7 358 aa4.92□□□□□ -1.62
CLK4-207ENST00000520909 C4orf47A7E2U8 309 aa4.92□□□□□ -1.62
CLK4-207ENST00000520909 LACTBL1A8MY62 500 aa4.92□□□□□ -1.62
CLK4-207ENST00000520909 BTN3A1O00481 513 aa4.92□□□□□ -1.62
CLK4-207ENST00000520909 SPRY2O43597 315 aa4.92□□□□□ -1.62
CLK4-207ENST00000520909 CD63P08962 238 aa4.92□□□□□ -1.62
CLK4-207ENST00000520909 RRS1Q15050 365 aaKnown RBP4.92□□□□□ -1.62
CLK4-207ENST00000520909 PFKFB3Q16875 520 aaPredicted RBP4.92□□□□□ -1.62
CLK4-207ENST00000520909 FAM110CQ1W6H9 321 aa4.92□□□□□ -1.62
CLK4-207ENST00000520909 KRTAP27-1Q3LI81 207 aa4.92□□□□□ -1.62
CLK4-207ENST00000520909 ZNF585BQ52M93 769 aa4.92□□□□□ -1.62
CLK4-207ENST00000520909 DCAF12L1Q5VU92 463 aa4.92□□□□□ -1.62
CLK4-207ENST00000520909 GRAMD1CQ8IYS0 662 aa4.92□□□□□ -1.62
CLK4-207ENST00000520909 OR6B3Q8NGW1 331 aa4.92□□□□□ -1.62
CLK4-207ENST00000520909 DNAJB14Q8TBM8 379 aa4.92□□□□□ -1.62
CLK4-207ENST00000520909 KBTBD7Q8WVZ9 684 aa4.92□□□□□ -1.62
CLK4-207ENST00000520909 HPS3Q969F9 1004 aa4.92□□□□□ -1.62
CLK4-207ENST00000520909 NLRP4Q96MN2 994 aa4.92□□□□□ -1.62
CLK4-207ENST00000520909 ASPSCR1Q9BZE9 553 aa4.92□□□□□ -1.62
CLK4-207ENST00000520909 TRIM5Q9C035 493 aa4.92□□□□□ -1.62
CLK4-207ENST00000520909 SEMA4BQ9NPR2 832 aaPredicted RBP4.92□□□□□ -1.62
CLK4-207ENST00000520909 ZBTB40Q9NUA8 1239 aa4.92□□□□□ -1.62
CLK4-207ENST00000520909 POLKQ9UBT6 870 aa4.92□□□□□ -1.62
CLK4-207ENST00000520909 MST1RQ04912 1400 aa4.92□□□□□ -1.62
CLK4-207ENST00000520909 SSH2Q76I76 1423 aa4.92□□□□□ -1.62
CLK4-207ENST00000520909 KRT86O43790 486 aa4.91□□□□□ -1.62
CLK4-207ENST00000520909 TBC1D4O60343 1298 aa4.91□□□□□ -1.62
CLK4-207ENST00000520909 CDC25AP30304 524 aa4.91□□□□□ -1.62
CLK4-207ENST00000520909 UQCRC1P31930 480 aa4.91□□□□□ -1.62
CLK4-207ENST00000520909 ARFIP2P53365 341 aa4.91□□□□□ -1.62
CLK4-207ENST00000520909 TIRAPP58753 221 aa4.91□□□□□ -1.62
CLK4-207ENST00000520909 KRT81Q14533 505 aa4.91□□□□□ -1.62
CLK4-207ENST00000520909 MFSD13AQ14CX5 517 aa4.91□□□□□ -1.62
CLK4-207ENST00000520909 USP43Q70EL4 1123 aa4.91□□□□□ -1.62
CLK4-207ENST00000520909 BRINP3Q76B58 766 aa4.91□□□□□ -1.62
CLK4-207ENST00000520909 NPHP3Q7Z494 1330 aa4.91□□□□□ -1.62
CLK4-207ENST00000520909 DCP1BQ8IZD4 617 aaKnown RBP4.91□□□□□ -1.62
CLK4-207ENST00000520909 C12orf76Q8N812 135 aaPredicted RBP4.91□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms