RNA–Protein interactions for RNA: ENST00000520889.1

IGHV4-55-201, Transcript of immunoglobulin heavy variable 4-55 (pseudogene), humanhuman

BASIC

Gene IGHV4-55, Length 368 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV4-55-201ENST00000520889 ZSCAN12O43309 604 aa6.62□□□□□ -1.35
IGHV4-55-201ENST00000520889 KRT86O43790 486 aa6.62□□□□□ -1.35
IGHV4-55-201ENST00000520889 GREM1O60565 184 aa6.62□□□□□ -1.35
IGHV4-55-201ENST00000520889 STC2O76061 302 aa6.62□□□□□ -1.35
IGHV4-55-201ENST00000520889 APOEP02649 317 aa6.62□□□□□ -1.35
IGHV4-55-201ENST00000520889 GLULP15104 373 aa6.62□□□□□ -1.35
IGHV4-55-201ENST00000520889 ABCB4P21439 1286 aa6.62□□□□□ -1.35
IGHV4-55-201ENST00000520889 HTR7P34969 479 aa6.62□□□□□ -1.35
IGHV4-55-201ENST00000520889 SLC11A2P49281 568 aa6.62□□□□□ -1.35
IGHV4-55-201ENST00000520889 SULT1E1P49888 294 aa6.62□□□□□ -1.35
IGHV4-55-201ENST00000520889 TBX4P57082 545 aa6.62□□□□□ -1.35
IGHV4-55-201ENST00000520889 RPL7AP62424 266 aaKnown RBP6.62□□□□□ -1.35
IGHV4-55-201ENST00000520889 PFKPQ01813 784 aa6.62□□□□□ -1.35
IGHV4-55-201ENST00000520889 TFF2Q03403 129 aa6.62□□□□□ -1.35
IGHV4-55-201ENST00000520889 MTF1Q14872 753 aa6.62□□□□□ -1.35
IGHV4-55-201ENST00000520889 ARL13BQ3SXY8 428 aa6.62□□□□□ -1.35
IGHV4-55-201ENST00000520889 C5orf22Q49AR2 442 aa6.62□□□□□ -1.35
IGHV4-55-201ENST00000520889 BOLA3Q53S33 107 aa6.62□□□□□ -1.35
IGHV4-55-201ENST00000520889 C2CD6Q53TS8 623 aa6.62□□□□□ -1.35
IGHV4-55-201ENST00000520889 TJAP1Q5JTD0 557 aa6.62□□□□□ -1.35
IGHV4-55-201ENST00000520889 MPP7Q5T2T1 576 aa6.62□□□□□ -1.35
IGHV4-55-201ENST00000520889 STXBP5Q5T5C0 1151 aa6.62□□□□□ -1.35
IGHV4-55-201ENST00000520889 LRRC38Q5VT99 294 aa6.62□□□□□ -1.35
IGHV4-55-201ENST00000520889 OTUD1Q5VV17 481 aaPredicted RBP6.62□□□□□ -1.35
IGHV4-55-201ENST00000520889 TRNP1Q6NT89 227 aa6.62□□□□□ -1.35
IGHV4-55-201ENST00000520889 C11orf63Q6NUN7 778 aa6.62□□□□□ -1.35
IGHV4-55-201ENST00000520889 CC2D1AQ6P1N0 951 aaPredicted RBP6.62□□□□□ -1.35
IGHV4-55-201ENST00000520889 POLNQ7Z5Q5 900 aa6.62□□□□□ -1.35
IGHV4-55-201ENST00000520889 TAC4Q86UU9 113 aa6.62□□□□□ -1.35
IGHV4-55-201ENST00000520889 VSIG1Q86XK7 387 aa6.62□□□□□ -1.35
IGHV4-55-201ENST00000520889 GPIHBP1Q8IV16 184 aa6.62□□□□□ -1.35
IGHV4-55-201ENST00000520889 ATP6V0D2Q8N8Y2 350 aa6.62□□□□□ -1.35
IGHV4-55-201ENST00000520889 JOSD2Q8TAC2 188 aa6.62□□□□□ -1.35
IGHV4-55-201ENST00000520889 SLC35G2Q8TBE7 412 aa6.62□□□□□ -1.35
IGHV4-55-201ENST00000520889 ADAMTS19Q8TE59 1207 aa6.62□□□□□ -1.35
IGHV4-55-201ENST00000520889 SH3RF2Q8TEC5 729 aa6.62□□□□□ -1.35
IGHV4-55-201ENST00000520889 OSCP1Q8WVF1 389 aa6.62□□□□□ -1.35
IGHV4-55-201ENST00000520889 ING5Q8WYH8 240 aa6.62□□□□□ -1.35
IGHV4-55-201ENST00000520889 NDRG1Q92597 394 aaKnown RBP6.62□□□□□ -1.35
IGHV4-55-201ENST00000520889 EDEM1Q92611 657 aa6.62□□□□□ -1.35
IGHV4-55-201ENST00000520889 DNASE1L2Q92874 299 aa6.62□□□□□ -1.35
IGHV4-55-201ENST00000520889 IRF7Q92985 503 aa6.62□□□□□ -1.35
IGHV4-55-201ENST00000520889 BTN2A3PQ96KV6 586 aa6.62□□□□□ -1.35
IGHV4-55-201ENST00000520889 FCRL2Q96LA5 508 aaPredicted RBP6.62□□□□□ -1.35
IGHV4-55-201ENST00000520889 ZSWIM3Q96MP5 696 aa6.62□□□□□ -1.35
IGHV4-55-201ENST00000520889 MCEEQ96PE7 176 aa6.62□□□□□ -1.35
IGHV4-55-201ENST00000520889 SLC22A12Q96S37 553 aa6.62□□□□□ -1.35
IGHV4-55-201ENST00000520889 HAPLN3Q96S86 360 aa6.62□□□□□ -1.35
IGHV4-55-201ENST00000520889 CYP2S1Q96SQ9 504 aa6.62□□□□□ -1.35
IGHV4-55-201ENST00000520889 FAM83CQ9BQN1 747 aa6.62□□□□□ -1.35
IGHV4-55-201ENST00000520889 PACSIN1Q9BY11 444 aa6.62□□□□□ -1.35
IGHV4-55-201ENST00000520889 FAM204AQ9H8W3 233 aa6.62□□□□□ -1.35
IGHV4-55-201ENST00000520889 KCNK12Q9HB15 430 aa6.62□□□□□ -1.35
IGHV4-55-201ENST00000520889 TRPC7Q9HCX4 862 aa6.62□□□□□ -1.35
IGHV4-55-201ENST00000520889 SLC2A4RGQ9NR83 387 aa6.62□□□□□ -1.35
IGHV4-55-201ENST00000520889 DDIT4Q9NX09 232 aa6.62□□□□□ -1.35
IGHV4-55-201ENST00000520889 MARK1Q9P0L2 795 aa6.62□□□□□ -1.35
IGHV4-55-201ENST00000520889 CTTNBP2NLQ9P2B4 639 aa6.62□□□□□ -1.35
IGHV4-55-201ENST00000520889 SFMBT1Q9UHJ3 866 aa6.62□□□□□ -1.35
IGHV4-55-201ENST00000520889 RASAL2Q9UJF2 1139 aa6.62□□□□□ -1.35
IGHV4-55-201ENST00000520889 SH3BP1Q9Y3L3 701 aa6.62□□□□□ -1.35
IGHV4-55-201ENST00000520889 NCOR1O75376 2440 aa6.61□□□□□ -1.35
IGHV4-55-201ENST00000520889 TICRRQ7Z2Z1 1910 aa6.61□□□□□ -1.35
IGHV4-55-201ENST00000520889 SLC12A8A0AV02 714 aa6.61□□□□□ -1.35
IGHV4-55-201ENST00000520889 ZNF487B1APH4 448 aa6.61□□□□□ -1.35
IGHV4-55-201ENST00000520889 GFRA2O00451 464 aa6.61□□□□□ -1.35
IGHV4-55-201ENST00000520889 MDM4O15151 490 aa6.61□□□□□ -1.35
IGHV4-55-201ENST00000520889 ATMINO43313 823 aaPredicted RBP6.61□□□□□ -1.35
IGHV4-55-201ENST00000520889 ACSL4O60488 711 aa6.61□□□□□ -1.35
IGHV4-55-201ENST00000520889 GRAP2O75791 330 aa6.61□□□□□ -1.35
IGHV4-55-201ENST00000520889 PROSCO94903 275 aa6.61□□□□□ -1.35
IGHV4-55-201ENST00000520889 PRAMEF12O95522 483 aa6.61□□□□□ -1.35
IGHV4-55-201ENST00000520889 TBX18O95935 607 aa6.61□□□□□ -1.35
IGHV4-55-201ENST00000520889 PSMA2P25787 234 aa6.61□□□□□ -1.35
IGHV4-55-201ENST00000520889 KCNQ1P51787 676 aa6.61□□□□□ -1.35
IGHV4-55-201ENST00000520889 HDAC4P56524 1084 aa6.61□□□□□ -1.35
IGHV4-55-201ENST00000520889 RNASE9P60153 205 aaKnown RBP6.61□□□□□ -1.35
IGHV4-55-201ENST00000520889 ZXDBP98169 803 aa6.61□□□□□ -1.35
IGHV4-55-201ENST00000520889 AMPD2Q01433 879 aa6.61□□□□□ -1.35
IGHV4-55-201ENST00000520889 OGDHQ02218 1023 aa6.61□□□□□ -1.35
IGHV4-55-201ENST00000520889 DEUP1Q05D60 604 aa6.61□□□□□ -1.35
IGHV4-55-201ENST00000520889 TDGQ13569 410 aa6.61□□□□□ -1.35
IGHV4-55-201ENST00000520889 HADHQ16836 314 aaKnown RBP6.61□□□□□ -1.35
IGHV4-55-201ENST00000520889 ADGRF1Q5T601 910 aa6.61□□□□□ -1.35
IGHV4-55-201ENST00000520889 TTC39BQ5VTQ0 682 aaPredicted RBP6.61□□□□□ -1.35
IGHV4-55-201ENST00000520889 RNF43Q68DV7 783 aa6.61□□□□□ -1.35
IGHV4-55-201ENST00000520889 TANGO2Q6ICL3 276 aa6.61□□□□□ -1.35
IGHV4-55-201ENST00000520889 PARM1Q6UWI2 310 aa6.61□□□□□ -1.35
IGHV4-55-201ENST00000520889 VITQ6UXI7 678 aa6.61□□□□□ -1.35
IGHV4-55-201ENST00000520889 KIAA1328Q86T90 577 aa6.61□□□□□ -1.35
IGHV4-55-201ENST00000520889 MIB1Q86YT6 1006 aa6.61□□□□□ -1.35
IGHV4-55-201ENST00000520889 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.61□□□□□ -1.35
IGHV4-55-201ENST00000520889 YAF2Q8IY57 180 aa6.61□□□□□ -1.35
IGHV4-55-201ENST00000520889 UBALD2Q8IYN6 164 aa6.61□□□□□ -1.35
IGHV4-55-201ENST00000520889 SYCE1Q8N0S2 351 aa6.61□□□□□ -1.35
IGHV4-55-201ENST00000520889 SLC44A3Q8N4M1 653 aa6.61□□□□□ -1.35
IGHV4-55-201ENST00000520889 EMC1Q8N766 993 aa6.61□□□□□ -1.35
IGHV4-55-201ENST00000520889 ACRBPQ8NEB7 543 aa6.61□□□□□ -1.35
IGHV4-55-201ENST00000520889 FAM172AQ8WUF8 416 aa6.61□□□□□ -1.35
IGHV4-55-201ENST00000520889 TEKT4Q8WW24 435 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms