RNA–Protein interactions for RNA: ENST00000520687.1

SPARC-202, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 2

Gene SPARC, Length 1,598 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-202ENST00000520687 GDF10P55107 478 aa10.31□□□□□ -0.76
SPARC-202ENST00000520687 BASP1P80723 227 aaKnown RBP10.31□□□□□ -0.76
SPARC-202ENST00000520687 SCAPQ12770 1279 aa10.31□□□□□ -0.76
SPARC-202ENST00000520687 DSC3Q14574 896 aa10.31□□□□□ -0.76
SPARC-202ENST00000520687 INTS6LQ5JSJ4 861 aaKnown RBP10.31□□□□□ -0.76
SPARC-202ENST00000520687 LGSNQ5TDP6 509 aa10.31□□□□□ -0.76
SPARC-202ENST00000520687 C1orf228Q6PIY5 440 aa10.31□□□□□ -0.76
SPARC-202ENST00000520687 ADGRD1Q6QNK2 874 aa10.31□□□□□ -0.76
SPARC-202ENST00000520687 VSTM1Q6UX27 236 aa10.31□□□□□ -0.76
SPARC-202ENST00000520687 CXCL17Q6UXB2 119 aa10.31□□□□□ -0.76
SPARC-202ENST00000520687 RGS9BPQ6ZS82 235 aa10.31□□□□□ -0.76
SPARC-202ENST00000520687 C3orf62Q6ZUJ4 267 aa10.31□□□□□ -0.76
SPARC-202ENST00000520687 CCDC121Q6ZUS5 278 aa10.31□□□□□ -0.76
SPARC-202ENST00000520687 CYS1Q717R9 158 aa10.31□□□□□ -0.76
SPARC-202ENST00000520687 CCNJLQ8IV13 435 aa10.31□□□□□ -0.76
SPARC-202ENST00000520687 TRIB2Q92519 343 aa10.31□□□□□ -0.76
SPARC-202ENST00000520687 WNT8BQ93098 351 aa10.31□□□□□ -0.76
SPARC-202ENST00000520687 MAGEB18Q96M61 343 aa10.31□□□□□ -0.76
SPARC-202ENST00000520687 PWWP2AQ96N64 755 aa10.31□□□□□ -0.76
SPARC-202ENST00000520687 QKIQ96PU8 341 aaKnown RBP eCLIP10.31□□□□□ -0.76
SPARC-202ENST00000520687 CSPG4P5Q96PW8 444 aa10.31□□□□□ -0.76
SPARC-202ENST00000520687 SYT15Q9BQS2 421 aa10.31□□□□□ -0.76
SPARC-202ENST00000520687 ACBD6Q9BR61 282 aa10.31□□□□□ -0.76
SPARC-202ENST00000520687 DHRS4Q9BTZ2 278 aa10.31□□□□□ -0.76
SPARC-202ENST00000520687 B3GNT5Q9BYG0 378 aa10.31□□□□□ -0.76
SPARC-202ENST00000520687 DHX35Q9H5Z1 703 aaKnown RBP10.31□□□□□ -0.76
SPARC-202ENST00000520687 XAB2Q9HCS7 855 aaKnown RBP10.31□□□□□ -0.76
SPARC-202ENST00000520687 DNAJC17Q9NVM6 304 aaKnown RBP10.31□□□□□ -0.76
SPARC-202ENST00000520687 DDX43Q9NXZ2 648 aaKnown RBP10.31□□□□□ -0.76
SPARC-202ENST00000520687 RABGEF1Q9UJ41 708 aa10.31□□□□□ -0.76
SPARC-202ENST00000520687 FZD10Q9ULW2 581 aa10.31□□□□□ -0.76
SPARC-202ENST00000520687 DYNC1LI1Q9Y6G9 523 aaKnown RBP10.31□□□□□ -0.76
SPARC-202ENST00000520687 TRIP12Q14669 1992 aaPredicted RBP10.31□□□□□ -0.76
SPARC-202ENST00000520687 PDCD11Q14690 1871 aaKnown RBP10.31□□□□□ -0.76
SPARC-202ENST00000520687 PIK3R2O00459 728 aa10.31□□□□□ -0.76
SPARC-202ENST00000520687 KCNN4O15554 427 aa10.31□□□□□ -0.76
SPARC-202ENST00000520687 MTSS1O43312 755 aa10.31□□□□□ -0.76
SPARC-202ENST00000520687 ZWINTO95229 277 aa10.31□□□□□ -0.76
SPARC-202ENST00000520687 VIMP08670 466 aaKnown RBP10.31□□□□□ -0.76
SPARC-202ENST00000520687 GHRP10912 638 aa10.31□□□□□ -0.76
SPARC-202ENST00000520687 MSH2P43246 934 aa10.31□□□□□ -0.76
SPARC-202ENST00000520687 FLT3LGP49771 235 aa10.31□□□□□ -0.76
SPARC-202ENST00000520687 SULT1E1P49888 294 aa10.31□□□□□ -0.76
SPARC-202ENST00000520687 ADCY1Q08828 1119 aa10.31□□□□□ -0.76
SPARC-202ENST00000520687 GRIK3Q13003 919 aa10.31□□□□□ -0.76
SPARC-202ENST00000520687 PDK1Q15118 436 aa10.31□□□□□ -0.76
SPARC-202ENST00000520687 ARL13BQ3SXY8 428 aa10.31□□□□□ -0.76
SPARC-202ENST00000520687 PPP6R3Q5H9R7 873 aaPredicted RBP10.31□□□□□ -0.76
SPARC-202ENST00000520687 RAB41Q5JT25 222 aa10.31□□□□□ -0.76
SPARC-202ENST00000520687 PRUNE1Q86TP1 453 aa10.31□□□□□ -0.76
SPARC-202ENST00000520687 ZC3H18Q86VM9 953 aaKnown RBP10.31□□□□□ -0.76
SPARC-202ENST00000520687 SUGP1Q8IWZ8 645 aaKnown RBP10.31□□□□□ -0.76
SPARC-202ENST00000520687 DEFB106AQ8N104 65 aa10.31□□□□□ -0.76
SPARC-202ENST00000520687 VPS52Q8N1B4 723 aa10.31□□□□□ -0.76
SPARC-202ENST00000520687 GSTCDQ8NEC7 633 aa10.31□□□□□ -0.76
SPARC-202ENST00000520687 SMARCD1Q96GM5 515 aa10.31□□□□□ -0.76
SPARC-202ENST00000520687 GAD1Q99259 594 aa10.31□□□□□ -0.76
SPARC-202ENST00000520687 PRMT1Q99873 361 aaKnown RBP10.31□□□□□ -0.76
SPARC-202ENST00000520687 TSEN34Q9BSV6 310 aaKnown RBP10.31□□□□□ -0.76
SPARC-202ENST00000520687 KDM4CQ9H3R0 1056 aa10.31□□□□□ -0.76
SPARC-202ENST00000520687 TRABDQ9H4I3 376 aa10.31□□□□□ -0.76
SPARC-202ENST00000520687 CSNK1G1Q9HCP0 422 aa10.31□□□□□ -0.76
SPARC-202ENST00000520687 RAB6BQ9NRW1 208 aa10.31□□□□□ -0.76
SPARC-202ENST00000520687 GABRQQ9UN88 632 aa10.31□□□□□ -0.76
SPARC-202ENST00000520687 HEY1Q9Y5J3 304 aa10.31□□□□□ -0.76
SPARC-202ENST00000520687 IKBKGQ9Y6K9 419 aa10.31□□□□□ -0.76
SPARC-202ENST00000520687 IQANK1A0A1B0GTG1 560 aa10.3□□□□□ -0.76
SPARC-202ENST00000520687 MYADML2A6NDP7 307 aa10.3□□□□□ -0.76
SPARC-202ENST00000520687 PPP1R12AO14974 1030 aaPredicted RBP10.3□□□□□ -0.76
SPARC-202ENST00000520687 OPHN1O60890 802 aa10.3□□□□□ -0.76
SPARC-202ENST00000520687 DGKIO75912 1065 aa10.3□□□□□ -0.76
SPARC-202ENST00000520687 EOMESO95936 686 aa10.3□□□□□ -0.76
SPARC-202ENST00000520687 ASGR1P07306 291 aa10.3□□□□□ -0.76
SPARC-202ENST00000520687 COL6A1P12109 1028 aa10.3□□□□□ -0.76
SPARC-202ENST00000520687 KRT15P19012 456 aa10.3□□□□□ -0.76
SPARC-202ENST00000520687 TYMPP19971 482 aa10.3□□□□□ -0.76
SPARC-202ENST00000520687 TKTP29401 623 aaKnown RBP10.3□□□□□ -0.76
SPARC-202ENST00000520687 CYP2C18P33260 490 aa10.3□□□□□ -0.76
SPARC-202ENST00000520687 HTR7P34969 479 aa10.3□□□□□ -0.76
SPARC-202ENST00000520687 THPOP40225 353 aa10.3□□□□□ -0.76
SPARC-202ENST00000520687 MLH1P40692 756 aa10.3□□□□□ -0.76
SPARC-202ENST00000520687 TKTL1P51854 596 aa10.3□□□□□ -0.76
SPARC-202ENST00000520687 GPX6P59796 221 aa10.3□□□□□ -0.76
SPARC-202ENST00000520687 DEUP1Q05D60 604 aa10.3□□□□□ -0.76
SPARC-202ENST00000520687 CACNB2Q08289 660 aaPredicted RBP10.3□□□□□ -0.76
SPARC-202ENST00000520687 ADIGQ0VDE8 80 aa10.3□□□□□ -0.76
SPARC-202ENST00000520687 TUSC3Q13454 348 aa10.3□□□□□ -0.76
SPARC-202ENST00000520687 SPARCL1Q14515 664 aa10.3□□□□□ -0.76
SPARC-202ENST00000520687 PAFAH1B3Q15102 231 aaKnown RBP10.3□□□□□ -0.76
SPARC-202ENST00000520687 TMED2Q15363 201 aa10.3□□□□□ -0.76
SPARC-202ENST00000520687 UPP1Q16831 310 aa10.3□□□□□ -0.76
SPARC-202ENST00000520687 KCTD19Q17RG1 926 aaPredicted RBP10.3□□□□□ -0.76
SPARC-202ENST00000520687 BBS9Q3SYG4 887 aa10.3□□□□□ -0.76
SPARC-202ENST00000520687 LACTB2Q53H82 288 aaPredicted RBP10.3□□□□□ -0.76
SPARC-202ENST00000520687 DCAF6Q58WW2 860 aa10.3□□□□□ -0.76
SPARC-202ENST00000520687 MDH1BQ5I0G3 518 aa10.3□□□□□ -0.76
SPARC-202ENST00000520687 FNBP1LQ5T0N5 605 aa10.3□□□□□ -0.76
SPARC-202ENST00000520687 UBAP2Q5T6F2 1119 aaKnown RBP10.3□□□□□ -0.76
SPARC-202ENST00000520687 ANKRD22Q5VYY1 191 aa10.3□□□□□ -0.76
SPARC-202ENST00000520687 HEATR6Q6AI08 1181 aaKnown RBP10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms