RNA–Protein interactions for RNA: ENST00000520339.5

CTNNA1-221, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 868 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-221ENST00000520339 DUSP15Q9H1R2 295 aaPredicted RBP9.81□□□□□ -0.84
CTNNA1-221ENST00000520339 CSNK1G1Q9HCP0 422 aa9.81□□□□□ -0.84
CTNNA1-221ENST00000520339 DMAP1Q9NPF5 467 aaPredicted RBP9.81□□□□□ -0.84
CTNNA1-221ENST00000520339 GMIPQ9P107 970 aa9.81□□□□□ -0.84
CTNNA1-221ENST00000520339 PCDHGA5Q9Y5G8 931 aa9.81□□□□□ -0.84
CTNNA1-221ENST00000520339 TICRRQ7Z2Z1 1910 aa9.81□□□□□ -0.84
CTNNA1-221ENST00000520339 PATJQ8NI35 1801 aa9.81□□□□□ -0.84
CTNNA1-221ENST00000520339 WDR87Q6ZQQ6 2873 aa9.81□□□□□ -0.84
CTNNA1-221ENST00000520339 TM4SF5O14894 197 aa9.8□□□□□ -0.84
CTNNA1-221ENST00000520339 CALUO43852 315 aaPredicted RBP9.8□□□□□ -0.84
CTNNA1-221ENST00000520339 BEST1O76090 585 aa9.8□□□□□ -0.84
CTNNA1-221ENST00000520339 RHOBTB3O94955 611 aa9.8□□□□□ -0.84
CTNNA1-221ENST00000520339 HLA-DRAP01903 254 aa9.8□□□□□ -0.84
CTNNA1-221ENST00000520339 CCDC130P13994 396 aa9.8□□□□□ -0.84
CTNNA1-221ENST00000520339 HNRNPLP14866 589 aaKnown RBP eCLIP9.8□□□□□ -0.84
CTNNA1-221ENST00000520339 EIF2DP41214 584 aaKnown RBP9.8□□□□□ -0.84
CTNNA1-221ENST00000520339 ASPAP45381 313 aa9.8□□□□□ -0.84
CTNNA1-221ENST00000520339 PGFP49763 221 aa9.8□□□□□ -0.84
CTNNA1-221ENST00000520339 TUBP50607 506 aa9.8□□□□□ -0.84
CTNNA1-221ENST00000520339 VAMP7P51809 220 aa9.8□□□□□ -0.84
CTNNA1-221ENST00000520339 NDST1P52848 882 aa9.8□□□□□ -0.84
CTNNA1-221ENST00000520339 LIMK1P53667 647 aa9.8□□□□□ -0.84
CTNNA1-221ENST00000520339 KRT85P78386 507 aa9.8□□□□□ -0.84
CTNNA1-221ENST00000520339 MRPS21P82921 87 aaKnown RBP9.8□□□□□ -0.84
CTNNA1-221ENST00000520339 ENPEPQ07075 957 aa9.8□□□□□ -0.84
CTNNA1-221ENST00000520339 CCDC6Q16204 474 aa9.8□□□□□ -0.84
CTNNA1-221ENST00000520339 C2orf27AQ580R0 203 aa9.8□□□□□ -0.84
CTNNA1-221ENST00000520339 CEP135Q66GS9 1140 aa9.8□□□□□ -0.84
CTNNA1-221ENST00000520339 SPOPLQ6IQ16 392 aa9.8□□□□□ -0.84
CTNNA1-221ENST00000520339 RASSF3Q86WH2 238 aa9.8□□□□□ -0.84
CTNNA1-221ENST00000520339 C12orf40Q86WS4 652 aa9.8□□□□□ -0.84
CTNNA1-221ENST00000520339 SFTPA1Q8IWL2 248 aa9.8□□□□□ -0.84
CTNNA1-221ENST00000520339 C12orf29Q8N999 325 aa9.8□□□□□ -0.84
CTNNA1-221ENST00000520339 TSTD1Q8NFU3 115 aa9.8□□□□□ -0.84
CTNNA1-221ENST00000520339 SLC2A14Q8TDB8 520 aa9.8□□□□□ -0.84
CTNNA1-221ENST00000520339 EPS8L3Q8TE67 593 aaKnown RBP9.8□□□□□ -0.84
CTNNA1-221ENST00000520339 WBP2Q969T9 261 aa9.8□□□□□ -0.84
CTNNA1-221ENST00000520339 PNKPQ96T60 521 aa9.8□□□□□ -0.84
CTNNA1-221ENST00000520339 CCSER2Q9H7U1 834 aa9.8□□□□□ -0.84
CTNNA1-221ENST00000520339 APOBEC3GQ9HC16 384 aaKnown RBP9.8□□□□□ -0.84
CTNNA1-221ENST00000520339 KRT82Q9NSB4 513 aa9.8□□□□□ -0.84
CTNNA1-221ENST00000520339 RXFP3Q9NSD7 469 aa9.8□□□□□ -0.84
CTNNA1-221ENST00000520339 CUEDC1Q9NWM3 386 aaPredicted RBP9.8□□□□□ -0.84
CTNNA1-221ENST00000520339 TBC1D14Q9P2M4 693 aa9.8□□□□□ -0.84
CTNNA1-221ENST00000520339 HMGXB4Q9UGU5 601 aa9.8□□□□□ -0.84
CTNNA1-221ENST00000520339 FRMD4BQ9Y2L6 1034 aa9.8□□□□□ -0.84
CTNNA1-221ENST00000520339 A0A1W2PQ27 194 aa9.79□□□□□ -0.84
CTNNA1-221ENST00000520339 A0A1W2PQ64 194 aa9.79□□□□□ -0.84
CTNNA1-221ENST00000520339 A0A1W2PQD8 194 aa9.79□□□□□ -0.84
CTNNA1-221ENST00000520339 EREGO14944 169 aa9.79□□□□□ -0.84
CTNNA1-221ENST00000520339 HOXC11O43248 304 aaPredicted RBP9.79□□□□□ -0.84
CTNNA1-221ENST00000520339 EFSO43281 561 aa9.79□□□□□ -0.84
CTNNA1-221ENST00000520339 GREM1O60565 184 aa9.79□□□□□ -0.84
CTNNA1-221ENST00000520339 RHOBTB1O94844 696 aa9.79□□□□□ -0.84
CTNNA1-221ENST00000520339 KIF20AO95235 890 aa9.79□□□□□ -0.84
CTNNA1-221ENST00000520339 KAT7O95251 611 aa9.79□□□□□ -0.84
CTNNA1-221ENST00000520339 ADRB1P08588 477 aa9.79□□□□□ -0.84
CTNNA1-221ENST00000520339 ADH5P11766 374 aa9.79□□□□□ -0.84
CTNNA1-221ENST00000520339 GRIA2P42262 883 aa9.79□□□□□ -0.84
CTNNA1-221ENST00000520339 KIR2DL1P43626 348 aaPredicted RBP9.79□□□□□ -0.84
CTNNA1-221ENST00000520339 DGKEP52429 567 aa9.79□□□□□ -0.84
CTNNA1-221ENST00000520339 TNP2Q05952 138 aa9.79□□□□□ -0.84
CTNNA1-221ENST00000520339 PPP3CAQ08209 521 aa9.79□□□□□ -0.84
CTNNA1-221ENST00000520339 INCA1Q0VD86 236 aa9.79□□□□□ -0.84
CTNNA1-221ENST00000520339 ELF2Q15723 593 aa9.79□□□□□ -0.84
CTNNA1-221ENST00000520339 CRY1Q16526 586 aa9.79□□□□□ -0.84
CTNNA1-221ENST00000520339 HSF5Q4G112 596 aaPredicted RBP9.79□□□□□ -0.84
CTNNA1-221ENST00000520339 LY6G5CQ5SRR4 150 aa9.79□□□□□ -0.84
CTNNA1-221ENST00000520339 EMC10Q5UCC4 262 aa9.79□□□□□ -0.84
CTNNA1-221ENST00000520339 BBS7Q8IWZ6 715 aa9.79□□□□□ -0.84
CTNNA1-221ENST00000520339 CCDC33Q8N5R6 958 aa9.79□□□□□ -0.84
CTNNA1-221ENST00000520339 OTUB2Q96DC9 234 aa9.79□□□□□ -0.84
CTNNA1-221ENST00000520339 CNOT6LQ96LI5 555 aaKnown RBP9.79□□□□□ -0.84
CTNNA1-221ENST00000520339 FRMD6Q96NE9 622 aa9.79□□□□□ -0.84
CTNNA1-221ENST00000520339 TWNKQ96RR1 684 aa9.79□□□□□ -0.84
CTNNA1-221ENST00000520339 HNRNPABQ99729 332 aaKnown RBP9.79□□□□□ -0.84
CTNNA1-221ENST00000520339 GSX2Q9BZM3 304 aa9.79□□□□□ -0.84
CTNNA1-221ENST00000520339 CYP3A43Q9HB55 503 aa9.79□□□□□ -0.84
CTNNA1-221ENST00000520339 VPS45Q9NRW7 570 aa9.79□□□□□ -0.84
CTNNA1-221ENST00000520339 MMP17Q9ULZ9 603 aa9.79□□□□□ -0.84
CTNNA1-221ENST00000520339 AK5Q9Y6K8 562 aa9.79□□□□□ -0.84
CTNNA1-221ENST00000520339 BCLAF3A2AJT9 711 aaKnown RBP9.78□□□□□ -0.84
CTNNA1-221ENST00000520339 PALM2-AKAP2B1ALY0 433 aaPredicted RBP9.78□□□□□ -0.84
CTNNA1-221ENST00000520339 HHLA1C9JL84 531 aa9.78□□□□□ -0.84
CTNNA1-221ENST00000520339 SGK1O00141 431 aa9.78□□□□□ -0.84
CTNNA1-221ENST00000520339 BNIP3LO60238 219 aa9.78□□□□□ -0.84
CTNNA1-221ENST00000520339 TLR5O60602 858 aa9.78□□□□□ -0.84
CTNNA1-221ENST00000520339 CLSTN1O94985 981 aa9.78□□□□□ -0.84
CTNNA1-221ENST00000520339 TBX18O95935 607 aa9.78□□□□□ -0.84
CTNNA1-221ENST00000520339 APODP05090 189 aa9.78□□□□□ -0.84
CTNNA1-221ENST00000520339 FAM200BP0CF97 657 aa9.78□□□□□ -0.84
CTNNA1-221ENST00000520339 TRIM49P0CI25 452 aa9.78□□□□□ -0.84
CTNNA1-221ENST00000520339 TRIM49CP0CI26 452 aa9.78□□□□□ -0.84
CTNNA1-221ENST00000520339 CES1P23141 567 aa9.78□□□□□ -0.84
CTNNA1-221ENST00000520339 NR2F2P24468 414 aa9.78□□□□□ -0.84
CTNNA1-221ENST00000520339 MPLP40238 635 aa9.78□□□□□ -0.84
CTNNA1-221ENST00000520339 PIK3CAP42336 1068 aa9.78□□□□□ -0.84
CTNNA1-221ENST00000520339 TNFRSF4P43489 277 aa9.78□□□□□ -0.84
CTNNA1-221ENST00000520339 GCLMP48507 274 aa9.78□□□□□ -0.84
CTNNA1-221ENST00000520339 MAP3K7CLP57077 242 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms