RNA–Protein interactions for RNA: ENST00000520233.1

SDC2-205, Transcript of syndecan 2, humanhuman

TSL 4

Gene SDC2, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-205ENST00000520233 ASB16Q96NS5 453 aa18.52■□□□□ 0.56
SDC2-205ENST00000520233 RAB6CQ9H0N0 254 aa18.52■□□□□ 0.56
SDC2-205ENST00000520233 KIF9Q9HAQ2 790 aa18.52■□□□□ 0.56
SDC2-205ENST00000520233 TRPV4Q9HBA0 871 aa18.52■□□□□ 0.56
SDC2-205ENST00000520233 GKN1Q9NS71 199 aa18.52■□□□□ 0.56
SDC2-205ENST00000520233 SLTMQ9NWH9 1034 aaKnown RBP eCLIP18.52■□□□□ 0.56
SDC2-205ENST00000520233 SMPD4Q9NXE4 827 aa18.52■□□□□ 0.56
SDC2-205ENST00000520233 COX16Q9P0S2 106 aa18.52■□□□□ 0.56
SDC2-205ENST00000520233 FAM50BQ9Y247 325 aa18.52■□□□□ 0.56
SDC2-205ENST00000520233 USTQ9Y2C2 406 aa18.52■□□□□ 0.56
SDC2-205ENST00000520233 LRCH4O75427 683 aa18.51■□□□□ 0.55
SDC2-205ENST00000520233 STC2O76061 302 aa18.51■□□□□ 0.55
SDC2-205ENST00000520233 PRAMEF12O95522 483 aa18.51■□□□□ 0.55
SDC2-205ENST00000520233 SLC2A3P11169 496 aa18.51■□□□□ 0.55
SDC2-205ENST00000520233 CCR1P32246 355 aa18.51■□□□□ 0.55
SDC2-205ENST00000520233 ATXN1P54253 815 aaKnown RBP18.51■□□□□ 0.55
SDC2-205ENST00000520233 ZXDBP98169 803 aa18.51■□□□□ 0.55
SDC2-205ENST00000520233 PPP2R5DQ14738 602 aa18.51■□□□□ 0.55
SDC2-205ENST00000520233 FAM78AQ5JUQ0 283 aa18.51■□□□□ 0.55
SDC2-205ENST00000520233 BRMS1LQ5PSV4 323 aa18.51■□□□□ 0.55
SDC2-205ENST00000520233 PTCRAQ6ISU1 281 aaPredicted RBP18.51■□□□□ 0.55
SDC2-205ENST00000520233 CC2D1AQ6P1N0 951 aaPredicted RBP18.51■□□□□ 0.55
SDC2-205ENST00000520233 DAAM2Q86T65 1068 aa18.51■□□□□ 0.55
SDC2-205ENST00000520233 CELF5Q8N6W0 485 aaKnown RBP18.51■□□□□ 0.55
SDC2-205ENST00000520233 LRRC57Q8N9N7 239 aa18.51■□□□□ 0.55
SDC2-205ENST00000520233 ADAMTS19Q8TE59 1207 aa18.51■□□□□ 0.55
SDC2-205ENST00000520233 RNF34Q969K3 372 aa18.51■□□□□ 0.55
SDC2-205ENST00000520233 FCRL2Q96LA5 508 aaPredicted RBP18.51■□□□□ 0.55
SDC2-205ENST00000520233 PHF7Q9BWX1 381 aaPredicted RBP18.51■□□□□ 0.55
SDC2-205ENST00000520233 SMG9Q9H0W8 520 aaKnown RBP18.51■□□□□ 0.55
SDC2-205ENST00000520233 WDCPQ9H6R7 721 aa18.51■□□□□ 0.55
SDC2-205ENST00000520233 PRDM6Q9NQX0 595 aa18.51■□□□□ 0.55
SDC2-205ENST00000520233 EIF2AK3Q9NZJ5 1116 aaKnown RBP18.51■□□□□ 0.55
SDC2-205ENST00000520233 ALG6Q9Y672 507 aa18.51■□□□□ 0.55
SDC2-205ENST00000520233 GRID2IPA4D2P6 1211 aa18.5■□□□□ 0.55
SDC2-205ENST00000520233 LEFTY2O00292 366 aa18.5■□□□□ 0.55
SDC2-205ENST00000520233 PALMO75781 387 aa18.5■□□□□ 0.55
SDC2-205ENST00000520233 HMBSP08397 361 aa18.5■□□□□ 0.55
SDC2-205ENST00000520233 KCNQ1P51787 676 aa18.5■□□□□ 0.55
SDC2-205ENST00000520233 ZC3H12AQ5D1E8 599 aaKnown RBP18.5■□□□□ 0.55
SDC2-205ENST00000520233 NUGGCQ68CJ6 796 aa18.5■□□□□ 0.55
SDC2-205ENST00000520233 SLFN11Q7Z7L1 901 aa18.5■□□□□ 0.55
SDC2-205ENST00000520233 FAM131BQ86XD5 332 aa18.5■□□□□ 0.55
SDC2-205ENST00000520233 UNC45BQ8IWX7 931 aa18.5■□□□□ 0.55
SDC2-205ENST00000520233 SYCE1Q8N0S2 351 aa18.5■□□□□ 0.55
SDC2-205ENST00000520233 SH3RF2Q8TEC5 729 aa18.5■□□□□ 0.55
SDC2-205ENST00000520233 ACSF2Q96CM8 615 aaPredicted RBP18.5■□□□□ 0.55
SDC2-205ENST00000520233 OBP2AQ9NY56 170 aa18.5■□□□□ 0.55
SDC2-205ENST00000520233 EPS15L1Q9UBC2 864 aa18.5■□□□□ 0.55
SDC2-205ENST00000520233 CCL26Q9Y258 94 aa18.5■□□□□ 0.55
SDC2-205ENST00000520233 CAPN6Q9Y6Q1 641 aa18.5■□□□□ 0.55
SDC2-205ENST00000520233 APOEP02649 317 aa18.49■□□□□ 0.55
SDC2-205ENST00000520233 COMTP21964 271 aa18.49■□□□□ 0.55
SDC2-205ENST00000520233 MIPP30301 263 aa18.49■□□□□ 0.55
SDC2-205ENST00000520233 HARS2P49590 506 aaKnown RBP18.49■□□□□ 0.55
SDC2-205ENST00000520233 TFF2Q03403 129 aa18.49■□□□□ 0.55
SDC2-205ENST00000520233 USP4Q13107 963 aa18.49■□□□□ 0.55
SDC2-205ENST00000520233 MTA1Q13330 715 aa18.49■□□□□ 0.55
SDC2-205ENST00000520233 HADHQ16836 314 aaKnown RBP18.49■□□□□ 0.55
SDC2-205ENST00000520233 SCYL2Q6P3W7 929 aa18.49■□□□□ 0.55
SDC2-205ENST00000520233 HTR3DQ70Z44 454 aa18.49■□□□□ 0.55
SDC2-205ENST00000520233 NTAN1Q96AB6 310 aa18.49■□□□□ 0.55
SDC2-205ENST00000520233 E2F7Q96AV8 911 aa18.49■□□□□ 0.55
SDC2-205ENST00000520233 ALS2CR12Q96Q35 445 aa18.49■□□□□ 0.55
SDC2-205ENST00000520233 DCLK3Q9C098 648 aa18.49■□□□□ 0.55
SDC2-205ENST00000520233 ARHGEF38Q9NXL2 777 aa18.49■□□□□ 0.55
SDC2-205ENST00000520233 CFAP97Q9P2B7 532 aa18.49■□□□□ 0.55
SDC2-205ENST00000520233 THEGQ9P2T0 379 aa18.49■□□□□ 0.55
SDC2-205ENST00000520233 SLC12A6Q9UHW9 1150 aa18.49■□□□□ 0.55
SDC2-205ENST00000520233 USP18Q9UMW8 372 aa18.49■□□□□ 0.55
SDC2-205ENST00000520233 SH3BP1Q9Y3L3 701 aa18.49■□□□□ 0.55
SDC2-205ENST00000520233 E2F8A0AVK6 867 aa18.48■□□□□ 0.55
SDC2-205ENST00000520233 KCNU1A8MYU2 1149 aa18.48■□□□□ 0.55
SDC2-205ENST00000520233 SPOPO43791 374 aa18.48■□□□□ 0.55
SDC2-205ENST00000520233 PRPSAP2O60256 369 aa18.48■□□□□ 0.55
SDC2-205ENST00000520233 GREM1O60565 184 aa18.48■□□□□ 0.55
SDC2-205ENST00000520233 IRF1P10914 325 aa18.48■□□□□ 0.55
SDC2-205ENST00000520233 FCARP24071 287 aa18.48■□□□□ 0.55
SDC2-205ENST00000520233 ADRA1BP35368 520 aa18.48■□□□□ 0.55
SDC2-205ENST00000520233 AIF1P55008 147 aa18.48■□□□□ 0.55
SDC2-205ENST00000520233 ZNF77Q15935 545 aa18.48■□□□□ 0.55
SDC2-205ENST00000520233 AAK1Q2M2I8 961 aa18.48■□□□□ 0.55
SDC2-205ENST00000520233 ARL13BQ3SXY8 428 aa18.48■□□□□ 0.55
SDC2-205ENST00000520233 DAB2IPQ5VWQ8 1189 aa18.48■□□□□ 0.55
SDC2-205ENST00000520233 CPNE8Q86YQ8 564 aa18.48■□□□□ 0.55
SDC2-205ENST00000520233 KIAA1958Q8N8K9 716 aa18.48■□□□□ 0.55
SDC2-205ENST00000520233 ATP6V0D2Q8N8Y2 350 aa18.48■□□□□ 0.55
SDC2-205ENST00000520233 TDRD5Q8NAT2 981 aaKnown RBP18.48■□□□□ 0.55
SDC2-205ENST00000520233 TRIM58Q8NG06 486 aa18.48■□□□□ 0.55
SDC2-205ENST00000520233 UBE2Q2Q8WVN8 375 aa18.48■□□□□ 0.55
SDC2-205ENST00000520233 WBP2Q969T9 261 aa18.48■□□□□ 0.55
SDC2-205ENST00000520233 AZIN2Q96A70 460 aa18.48■□□□□ 0.55
SDC2-205ENST00000520233 TKTL2Q9H0I9 626 aa18.48■□□□□ 0.55
SDC2-205ENST00000520233 GOLPH3Q9H4A6 298 aa18.48■□□□□ 0.55
SDC2-205ENST00000520233 ZFP14Q9HCL3 533 aa18.48■□□□□ 0.55
SDC2-205ENST00000520233 PCSK1NQ9UHG2 260 aa18.48■□□□□ 0.55
SDC2-205ENST00000520233 LSM7Q9UK45 103 aaKnown RBP18.48■□□□□ 0.55
SDC2-205ENST00000520233 NR2E1Q9Y466 385 aa18.48■□□□□ 0.55
SDC2-205ENST00000520233 LATS1O95835 1130 aa18.47■□□□□ 0.55
SDC2-205ENST00000520233 KLKB1P03952 638 aa18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms