RNA–Protein interactions for RNA: ENST00000520133.5

COL13A1-212, Transcript of collagen type XIII alpha 1 chain, humanhuman

TSL 5 BASIC

Gene COL13A1, Length 1,833 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-212ENST00000520133 CREB3O43889 395 aa27.92■■■□□ 2.06
COL13A1-212ENST00000520133 ABHD2P08910 425 aa27.92■■■□□ 2.06
COL13A1-212ENST00000520133 HPDP32754 393 aaPredicted RBP27.92■■■□□ 2.06
COL13A1-212ENST00000520133 CCL23P55773 120 aa27.92■■■□□ 2.06
COL13A1-212ENST00000520133 CTXN3Q4LDR2 81 aa27.92■■■□□ 2.06
COL13A1-212ENST00000520133 ZNF280DQ6N043 979 aa27.92■■■□□ 2.06
COL13A1-212ENST00000520133 VSTM1Q6UX27 236 aa27.92■■■□□ 2.06
COL13A1-212ENST00000520133 CEP57Q86XR8 500 aa27.92■■■□□ 2.06
COL13A1-212ENST00000520133 SCAMP5Q8TAC9 235 aa27.92■■■□□ 2.06
COL13A1-212ENST00000520133 EPS8L3Q8TE67 593 aaKnown RBP27.92■■■□□ 2.06
COL13A1-212ENST00000520133 TLCD1Q96CP7 247 aa27.92■■■□□ 2.06
COL13A1-212ENST00000520133 TOX2Q96NM4 488 aa27.92■■■□□ 2.06
COL13A1-212ENST00000520133 TMEM175Q9BSA9 504 aa27.92■■■□□ 2.06
COL13A1-212ENST00000520133 WDCPQ9H6R7 721 aa27.92■■■□□ 2.06
COL13A1-212ENST00000520133 FNDC1Q4ZHG4 1894 aaPredicted RBP27.92■■■□□ 2.06
COL13A1-212ENST00000520133 SF3B1O75533 1304 aaKnown RBP eCLIP27.91■■■□□ 2.06
COL13A1-212ENST00000520133 SMIM23A6NLE4 172 aa27.91■■■□□ 2.06
COL13A1-212ENST00000520133 HACD1B0YJ81 288 aa27.91■■■□□ 2.06
COL13A1-212ENST00000520133 ALOX15BO15296 676 aa27.91■■■□□ 2.06
COL13A1-212ENST00000520133 SHOX2O60902 331 aaPredicted RBP27.91■■■□□ 2.06
COL13A1-212ENST00000520133 MAP3K6O95382 1288 aa27.91■■■□□ 2.06
COL13A1-212ENST00000520133 AGTP01019 485 aa27.91■■■□□ 2.06
COL13A1-212ENST00000520133 IVLP07476 585 aa27.91■■■□□ 2.06
COL13A1-212ENST00000520133 GATMP50440 423 aa27.91■■■□□ 2.06
COL13A1-212ENST00000520133 ATP1A2P50993 1020 aa27.91■■■□□ 2.06
COL13A1-212ENST00000520133 MAGOHP61326 146 aaKnown RBP27.91■■■□□ 2.06
COL13A1-212ENST00000520133 SLC10A2Q12908 348 aaPredicted RBP27.91■■■□□ 2.06
COL13A1-212ENST00000520133 ELAVL2Q12926 359 aaKnown RBP27.91■■■□□ 2.06
COL13A1-212ENST00000520133 SCN4BQ8IWT1 228 aa27.91■■■□□ 2.06
COL13A1-212ENST00000520133 TMPRSS4Q9NRS4 437 aa27.91■■■□□ 2.06
COL13A1-212ENST00000520133 ABCC13Q9NSE7 274 aa27.91■■■□□ 2.06
COL13A1-212ENST00000520133 DTLQ9NZJ0 730 aa27.91■■■□□ 2.06
COL13A1-212ENST00000520133 MICAL3Q7RTP6 2002 aa27.91■■■□□ 2.06
COL13A1-212ENST00000520133 MYO16Q9Y6X6 1858 aa27.91■■■□□ 2.06
COL13A1-212ENST00000520133 LOC101059915A0A1B0GWI6 518 aaPredicted RBP27.9■■■□□ 2.06
COL13A1-212ENST00000520133 OR6C75A6NL08 312 aa27.9■■■□□ 2.06
COL13A1-212ENST00000520133 TNFRSF10BO14763 440 aa27.9■■■□□ 2.06
COL13A1-212ENST00000520133 EIF3HO15372 352 aaKnown RBP eCLIP27.9■■■□□ 2.06
COL13A1-212ENST00000520133 CXCR3P49682 368 aa27.9■■■□□ 2.06
COL13A1-212ENST00000520133 ZNF135P52742 658 aaPredicted RBP27.9■■■□□ 2.06
COL13A1-212ENST00000520133 DMTNQ08495 405 aa27.9■■■□□ 2.06
COL13A1-212ENST00000520133 FAAP100Q0VG06 881 aa27.9■■■□□ 2.06
COL13A1-212ENST00000520133 PDIA2Q13087 525 aaKnown RBP27.9■■■□□ 2.06
COL13A1-212ENST00000520133 TCTN1Q2MV58 587 aa27.9■■■□□ 2.06
COL13A1-212ENST00000520133 ANKRD22Q5VYY1 191 aa27.9■■■□□ 2.06
COL13A1-212ENST00000520133 MFSD5Q6N075 450 aa27.9■■■□□ 2.06
COL13A1-212ENST00000520133 KCNT2Q6UVM3 1135 aa27.9■■■□□ 2.06
COL13A1-212ENST00000520133 CRIPAKQ8N1N5 446 aa27.9■■■□□ 2.06
COL13A1-212ENST00000520133 SERPINB12Q96P63 405 aa27.9■■■□□ 2.06
COL13A1-212ENST00000520133 QKIQ96PU8 341 aaKnown RBP eCLIP27.9■■■□□ 2.06
COL13A1-212ENST00000520133 PPP1R12CQ9BZL4 782 aa27.9■■■□□ 2.06
COL13A1-212ENST00000520133 XPO7Q9UIA9 1087 aaKnown RBP27.9■■■□□ 2.06
COL13A1-212ENST00000520133 PCDHB5Q9Y5E4 795 aa27.9■■■□□ 2.06
COL13A1-212ENST00000520133 GOLGA8MH3BSY2 632 aa27.9■■■□□ 2.06
COL13A1-212ENST00000520133 TRIM66O15016 1216 aa27.9■■■□□ 2.06
COL13A1-212ENST00000520133 TCEA3O75764 348 aa27.9■■■□□ 2.06
COL13A1-212ENST00000520133 SLC11A1P49279 550 aa27.9■■■□□ 2.06
COL13A1-212ENST00000520133 YWHAGP61981 247 aaKnown RBP eCLIP27.9■■■□□ 2.06
COL13A1-212ENST00000520133 PPP2R2AP63151 447 aa27.9■■■□□ 2.06
COL13A1-212ENST00000520133 MRPL58Q14197 206 aaKnown RBP27.9■■■□□ 2.06
COL13A1-212ENST00000520133 STAT4Q14765 748 aa27.9■■■□□ 2.06
COL13A1-212ENST00000520133 BTBD8Q5XKL5 378 aa27.9■■■□□ 2.06
COL13A1-212ENST00000520133 ZBED8Q8IZ13 594 aa27.9■■■□□ 2.06
COL13A1-212ENST00000520133 ETNK2Q9NVF9 386 aa27.9■■■□□ 2.06
COL13A1-212ENST00000520133 A0A087WUV0 522 aaPredicted RBP27.89■■■□□ 2.06
COL13A1-212ENST00000520133 TBKBP1A7MCY6 615 aa27.89■■■□□ 2.06
COL13A1-212ENST00000520133 CHADO15335 359 aa27.89■■■□□ 2.06
COL13A1-212ENST00000520133 FGFR3P22607 806 aa27.89■■■□□ 2.06
COL13A1-212ENST00000520133 NRLP54845 237 aa27.89■■■□□ 2.06
COL13A1-212ENST00000520133 IFRD2Q12894 506 aaPredicted RBP27.89■■■□□ 2.06
COL13A1-212ENST00000520133 HEATR6Q6AI08 1181 aaKnown RBP27.89■■■□□ 2.06
COL13A1-212ENST00000520133 PPP1R21Q6ZMI0 780 aa27.89■■■□□ 2.06
COL13A1-212ENST00000520133 RFX8Q6ZV50 586 aa27.89■■■□□ 2.06
COL13A1-212ENST00000520133 PDIK1LQ8N165 341 aa27.89■■■□□ 2.06
COL13A1-212ENST00000520133 TAB3Q8N5C8 712 aaPredicted RBP27.89■■■□□ 2.06
COL13A1-212ENST00000520133 C8orf48Q96LL4 319 aa27.89■■■□□ 2.06
COL13A1-212ENST00000520133 GPR62Q9BZJ7 368 aa27.89■■■□□ 2.06
COL13A1-212ENST00000520133 KLC2Q9H0B6 622 aa27.89■■■□□ 2.06
COL13A1-212ENST00000520133 MARCH5Q9NX47 278 aa27.89■■■□□ 2.06
COL13A1-212ENST00000520133 SLCO1A2P46721 670 aa27.88■■■□□ 2.05
COL13A1-212ENST00000520133 HCAR3P49019 387 aa27.88■■■□□ 2.05
COL13A1-212ENST00000520133 TLE2Q04725 743 aa27.88■■■□□ 2.05
COL13A1-212ENST00000520133 AUHQ13825 339 aaKnown RBP27.88■■■□□ 2.05
COL13A1-212ENST00000520133 LONRF1Q17RB8 773 aa27.88■■■□□ 2.05
COL13A1-212ENST00000520133 LEKR1Q6ZMV7 388 aa27.88■■■□□ 2.05
COL13A1-212ENST00000520133 PDZD4Q76G19 769 aaPredicted RBP27.88■■■□□ 2.05
COL13A1-212ENST00000520133 TAC4Q86UU9 113 aa27.88■■■□□ 2.05
COL13A1-212ENST00000520133 DQX1Q8TE96 717 aaKnown RBP27.88■■■□□ 2.05
COL13A1-212ENST00000520133 TFB1MQ8WVM0 346 aaKnown RBP27.88■■■□□ 2.05
COL13A1-212ENST00000520133 OLFM3Q96PB7 478 aa27.88■■■□□ 2.05
COL13A1-212ENST00000520133 FERMT1Q9BQL6 677 aa27.88■■■□□ 2.05
COL13A1-212ENST00000520133 CRISPLD2Q9H0B8 497 aa27.88■■■□□ 2.05
COL13A1-212ENST00000520133 RAB6BQ9NRW1 208 aa27.88■■■□□ 2.05
COL13A1-212ENST00000520133 MAGEA11P43364 429 aa27.88■■■□□ 2.05
COL13A1-212ENST00000520133 DPYSQ14117 519 aa27.88■■■□□ 2.05
COL13A1-212ENST00000520133 TRIM60Q495X7 471 aa27.88■■■□□ 2.05
COL13A1-212ENST00000520133 FUT10Q6P4F1 479 aa27.88■■■□□ 2.05
COL13A1-212ENST00000520133 LRRC43Q8N309 656 aa27.88■■■□□ 2.05
COL13A1-212ENST00000520133 RNF34Q969K3 372 aa27.88■■■□□ 2.05
COL13A1-212ENST00000520133 FRMD8Q9BZ67 464 aaPredicted RBP27.88■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms