RNA–Protein interactions for RNA: ENST00000519684.5

HMGB4-203, Transcript of high mobility group box 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGB4, Length 2,343 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4-203ENST00000519684 PAFAH2Q99487 392 aa8.72□□□□□ -1.01
HMGB4-203ENST00000519684 PAIP2Q9BPZ3 127 aaKnown RBP8.72□□□□□ -1.01
HMGB4-203ENST00000519684 MLXIPLQ9NP71 852 aa8.72□□□□□ -1.01
HMGB4-203ENST00000519684 DTLQ9NZJ0 730 aa8.72□□□□□ -1.01
HMGB4-203ENST00000519684 SF3B1O75533 1304 aaKnown RBP eCLIP8.72□□□□□ -1.01
HMGB4-203ENST00000519684 KBTBD13C9JR72 458 aa8.72□□□□□ -1.01
HMGB4-203ENST00000519684 I3L4J1 428 aa8.72□□□□□ -1.01
HMGB4-203ENST00000519684 PPP1R12AO14974 1030 aaPredicted RBP8.72□□□□□ -1.01
HMGB4-203ENST00000519684 SPAG7O75391 227 aa8.72□□□□□ -1.01
HMGB4-203ENST00000519684 CPP00450 1065 aa8.72□□□□□ -1.01
HMGB4-203ENST00000519684 USP17L7P0C7H9 530 aa8.72□□□□□ -1.01
HMGB4-203ENST00000519684 NCAM1P13591 858 aa8.72□□□□□ -1.01
HMGB4-203ENST00000519684 MAGEA6P43360 314 aa8.72□□□□□ -1.01
HMGB4-203ENST00000519684 MAGEA9P43362 315 aa8.72□□□□□ -1.01
HMGB4-203ENST00000519684 TSPY1Q01534 308 aa8.72□□□□□ -1.01
HMGB4-203ENST00000519684 SLC10A2Q12908 348 aaPredicted RBP8.72□□□□□ -1.01
HMGB4-203ENST00000519684 EFTUD2Q15029 972 aaKnown RBP eCLIP8.72□□□□□ -1.01
HMGB4-203ENST00000519684 PDK1Q15118 436 aa8.72□□□□□ -1.01
HMGB4-203ENST00000519684 MAPRE1Q15691 268 aaKnown RBP8.72□□□□□ -1.01
HMGB4-203ENST00000519684 SEPT7Q16181 437 aaKnown RBP8.72□□□□□ -1.01
HMGB4-203ENST00000519684 ARL13BQ3SXY8 428 aa8.72□□□□□ -1.01
HMGB4-203ENST00000519684 PAN2Q504Q3 1202 aaKnown RBP8.72□□□□□ -1.01
HMGB4-203ENST00000519684 INTS6LQ5JSJ4 861 aaKnown RBP8.72□□□□□ -1.01
HMGB4-203ENST00000519684 RAB41Q5JT25 222 aa8.72□□□□□ -1.01
HMGB4-203ENST00000519684 OTUD1Q5VV17 481 aaPredicted RBP8.72□□□□□ -1.01
HMGB4-203ENST00000519684 SYPL2Q5VXT5 272 aa8.72□□□□□ -1.01
HMGB4-203ENST00000519684 HFE2Q6ZVN8 426 aa8.72□□□□□ -1.01
HMGB4-203ENST00000519684 MCUQ8NE86 351 aa8.72□□□□□ -1.01
HMGB4-203ENST00000519684 HTR3CQ8WXA8 447 aa8.72□□□□□ -1.01
HMGB4-203ENST00000519684 PPM1EQ8WY54 764 aa8.72□□□□□ -1.01
HMGB4-203ENST00000519684 MAGEB18Q96M61 343 aa8.72□□□□□ -1.01
HMGB4-203ENST00000519684 TGS1Q96RS0 853 aaKnown RBP8.72□□□□□ -1.01
HMGB4-203ENST00000519684 KCNK16Q96T55 309 aa8.72□□□□□ -1.01
HMGB4-203ENST00000519684 SLC9A7Q96T83 725 aa8.72□□□□□ -1.01
HMGB4-203ENST00000519684 ELAC2Q9BQ52 826 aaKnown RBP8.72□□□□□ -1.01
HMGB4-203ENST00000519684 ACBD6Q9BR61 282 aa8.72□□□□□ -1.01
HMGB4-203ENST00000519684 PAAF1Q9BRP4 392 aa8.72□□□□□ -1.01
HMGB4-203ENST00000519684 TRIM62Q9BVG3 475 aa8.72□□□□□ -1.01
HMGB4-203ENST00000519684 MAGEB5Q9BZ81 275 aa8.72□□□□□ -1.01
HMGB4-203ENST00000519684 ETNK1Q9HBU6 452 aa8.72□□□□□ -1.01
HMGB4-203ENST00000519684 ARHGEF4Q9NR80 690 aa8.72□□□□□ -1.01
HMGB4-203ENST00000519684 PIGVQ9NUD9 493 aa8.72□□□□□ -1.01
HMGB4-203ENST00000519684 TRMT13Q9NUP7 481 aaKnown RBP8.72□□□□□ -1.01
HMGB4-203ENST00000519684 USP3Q9Y6I4 520 aa8.72□□□□□ -1.01
HMGB4-203ENST00000519684 TEX264Q9Y6I9 313 aa8.72□□□□□ -1.01
HMGB4-203ENST00000519684 SQORQ9Y6N5 450 aa8.72□□□□□ -1.01
HMGB4-203ENST00000519684 IQANK1A0A1B0GTG1 560 aa8.71□□□□□ -1.01
HMGB4-203ENST00000519684 YJEFN3A6XGL0 299 aa8.71□□□□□ -1.01
HMGB4-203ENST00000519684 C9IYK1 514 aa8.71□□□□□ -1.01
HMGB4-203ENST00000519684 E7ENQ6 273 aa8.71□□□□□ -1.01
HMGB4-203ENST00000519684 NRP1O14786 923 aa8.71□□□□□ -1.01
HMGB4-203ENST00000519684 MFSD11O43934 449 aa8.71□□□□□ -1.01
HMGB4-203ENST00000519684 DGKIO75912 1065 aa8.71□□□□□ -1.01
HMGB4-203ENST00000519684 F9P00740 461 aa8.71□□□□□ -1.01
HMGB4-203ENST00000519684 CYP11A1P05108 521 aa8.71□□□□□ -1.01
HMGB4-203ENST00000519684 INHBAP08476 426 aa8.71□□□□□ -1.01
HMGB4-203ENST00000519684 TPSB2P20231 275 aa8.71□□□□□ -1.01
HMGB4-203ENST00000519684 CA4P22748 312 aa8.71□□□□□ -1.01
HMGB4-203ENST00000519684 FDFT1P37268 417 aa8.71□□□□□ -1.01
HMGB4-203ENST00000519684 BRCC3P46736 316 aa8.71□□□□□ -1.01
HMGB4-203ENST00000519684 ACLYP53396 1101 aa8.71□□□□□ -1.01
HMGB4-203ENST00000519684 SLC18A1P54219 525 aa8.71□□□□□ -1.01
HMGB4-203ENST00000519684 PITX1P78337 314 aaPredicted RBP8.71□□□□□ -1.01
HMGB4-203ENST00000519684 SPARCL1Q14515 664 aa8.71□□□□□ -1.01
HMGB4-203ENST00000519684 ITIH4Q14624 930 aa8.71□□□□□ -1.01
HMGB4-203ENST00000519684 TPSAB1Q15661 275 aa8.71□□□□□ -1.01
HMGB4-203ENST00000519684 ADGRD1Q6QNK2 874 aa8.71□□□□□ -1.01
HMGB4-203ENST00000519684 RFX8Q6ZV50 586 aa8.71□□□□□ -1.01
HMGB4-203ENST00000519684 BNIPLQ7Z465 357 aa8.71□□□□□ -1.01
HMGB4-203ENST00000519684 ECHDC2Q86YB7 292 aa8.71□□□□□ -1.01
HMGB4-203ENST00000519684 REM2Q8IYK8 340 aaPredicted RBP8.71□□□□□ -1.01
HMGB4-203ENST00000519684 C4orf33Q8N1A6 199 aa8.71□□□□□ -1.01
HMGB4-203ENST00000519684 HASPINQ8TF76 798 aa8.71□□□□□ -1.01
HMGB4-203ENST00000519684 LRRN4Q8WUT4 740 aa8.71□□□□□ -1.01
HMGB4-203ENST00000519684 IRGQQ8WZA9 623 aa8.71□□□□□ -1.01
HMGB4-203ENST00000519684 NTAN1Q96AB6 310 aa8.71□□□□□ -1.01
HMGB4-203ENST00000519684 LRRC39Q96DD0 335 aa8.71□□□□□ -1.01
HMGB4-203ENST00000519684 WDR83Q9BRX9 315 aaKnown RBP8.71□□□□□ -1.01
HMGB4-203ENST00000519684 OSBPL7Q9BZF2 842 aa8.71□□□□□ -1.01
HMGB4-203ENST00000519684 RASSF4Q9H2L5 321 aa8.71□□□□□ -1.01
HMGB4-203ENST00000519684 XAB2Q9HCS7 855 aaKnown RBP8.71□□□□□ -1.01
HMGB4-203ENST00000519684 DMAP1Q9NPF5 467 aaPredicted RBP8.71□□□□□ -1.01
HMGB4-203ENST00000519684 DDIT4Q9NX09 232 aa8.71□□□□□ -1.01
HMGB4-203ENST00000519684 RNF186Q9NXI6 227 aa8.71□□□□□ -1.01
HMGB4-203ENST00000519684 ZC3H7BQ9UGR2 993 aaKnown RBP8.71□□□□□ -1.01
HMGB4-203ENST00000519684 A0A0A0MRY4 1105 aa8.71□□□□□ -1.02
HMGB4-203ENST00000519684 GSTA2P09210 222 aa8.71□□□□□ -1.02
HMGB4-203ENST00000519684 ADRA1BP35368 520 aa8.71□□□□□ -1.02
HMGB4-203ENST00000519684 RABGGTBP53611 331 aa8.71□□□□□ -1.02
HMGB4-203ENST00000519684 TPI1P60174 286 aa8.71□□□□□ -1.02
HMGB4-203ENST00000519684 AP1B1Q10567 949 aa8.71□□□□□ -1.02
HMGB4-203ENST00000519684 CBLBQ13191 982 aa8.71□□□□□ -1.02
HMGB4-203ENST00000519684 MPP2Q14168 576 aa8.71□□□□□ -1.02
HMGB4-203ENST00000519684 TRIM71Q2Q1W2 868 aaKnown RBP8.71□□□□□ -1.02
HMGB4-203ENST00000519684 HHATQ5VTY9 493 aa8.71□□□□□ -1.02
HMGB4-203ENST00000519684 NUGGCQ68CJ6 796 aa8.71□□□□□ -1.02
HMGB4-203ENST00000519684 OVOS1Q6IE37 1185 aa8.71□□□□□ -1.02
HMGB4-203ENST00000519684 DCLRE1AQ6PJP8 1040 aa8.71□□□□□ -1.02
HMGB4-203ENST00000519684 GLB1LQ6UWU2 654 aa8.71□□□□□ -1.02
HMGB4-203ENST00000519684 C6orf89Q6UWU4 347 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms