RNA–Protein interactions for RNA: ENST00000519540.5

FAM49B-214, Transcript of family with sequence similarity 49 member B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FAM49B, Length 2,021 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49B-214ENST00000519540 SLC12A6Q9UHW9 1150 aa19.13■□□□□ 0.65
FAM49B-214ENST00000519540 XPO7Q9UIA9 1087 aaKnown RBP19.13■□□□□ 0.65
FAM49B-214ENST00000519540 MFHAS1Q9Y4C4 1052 aa19.13■□□□□ 0.65
FAM49B-214ENST00000519540 PATJQ8NI35 1801 aa19.13■□□□□ 0.65
FAM49B-214ENST00000519540 TNFRSF10BO14763 440 aa19.13■□□□□ 0.65
FAM49B-214ENST00000519540 TMEM63AO94886 807 aa19.13■□□□□ 0.65
FAM49B-214ENST00000519540 GRIK1P39086 918 aa19.13■□□□□ 0.65
FAM49B-214ENST00000519540 MDH1P40925 334 aaKnown RBP19.13■□□□□ 0.65
FAM49B-214ENST00000519540 GATMP50440 423 aa19.13■□□□□ 0.65
FAM49B-214ENST00000519540 ARL4CP56559 192 aa19.13■□□□□ 0.65
FAM49B-214ENST00000519540 GUCY1A3Q02108 690 aa19.13■□□□□ 0.65
FAM49B-214ENST00000519540 HP1BP3Q5SSJ5 553 aaPredicted RBP19.13■□□□□ 0.65
FAM49B-214ENST00000519540 FNBP1LQ5T0N5 605 aa19.13■□□□□ 0.65
FAM49B-214ENST00000519540 KCNT2Q6UVM3 1135 aa19.13■□□□□ 0.65
FAM49B-214ENST00000519540 ZBED8Q8IZ13 594 aa19.13■□□□□ 0.65
FAM49B-214ENST00000519540 DCP1BQ8IZD4 617 aaKnown RBP19.13■□□□□ 0.65
FAM49B-214ENST00000519540 CRIPAKQ8N1N5 446 aa19.13■□□□□ 0.65
FAM49B-214ENST00000519540 COLEC11Q9BWP8 271 aa19.13■□□□□ 0.65
FAM49B-214ENST00000519540 STMN4Q9H169 189 aaPredicted RBP19.13■□□□□ 0.65
FAM49B-214ENST00000519540 LRFN2Q9ULH4 789 aa19.13■□□□□ 0.65
FAM49B-214ENST00000519540 DYNC1LI1Q9Y6G9 523 aaKnown RBP19.13■□□□□ 0.65
FAM49B-214ENST00000519540 TET1Q8NFU7 2136 aa19.12■□□□□ 0.65
FAM49B-214ENST00000519540 ERICH4A6NGS2 130 aa19.12■□□□□ 0.65
FAM49B-214ENST00000519540 I6L893 689 aaPredicted RBP19.12■□□□□ 0.65
FAM49B-214ENST00000519540 SYN3O14994 580 aa19.12■□□□□ 0.65
FAM49B-214ENST00000519540 CREB3O43889 395 aa19.12■□□□□ 0.65
FAM49B-214ENST00000519540 DGKIO75912 1065 aa19.12■□□□□ 0.65
FAM49B-214ENST00000519540 STAT4Q14765 748 aa19.12■□□□□ 0.65
FAM49B-214ENST00000519540 FAM182AQ5T1J6 154 aa19.12■□□□□ 0.65
FAM49B-214ENST00000519540 LRRC31Q6UY01 552 aa19.12■□□□□ 0.65
FAM49B-214ENST00000519540 BEND5Q7L4P6 421 aa19.12■□□□□ 0.65
FAM49B-214ENST00000519540 QKIQ96PU8 341 aaKnown RBP eCLIP19.12■□□□□ 0.651e-11■■■■■ 65.9
FAM49B-214ENST00000519540 CCDC77Q9BR77 488 aa19.12■□□□□ 0.65
FAM49B-214ENST00000519540 ADAM28Q9UKQ2 775 aa19.12■□□□□ 0.65
FAM49B-214ENST00000519540 E7ESA3 106 aa19.12■□□□□ 0.65
FAM49B-214ENST00000519540 EIF3HO15372 352 aaKnown RBP eCLIP19.12■□□□□ 0.65
FAM49B-214ENST00000519540 AMHP03971 560 aa19.12■□□□□ 0.65
FAM49B-214ENST00000519540 ALDH2P05091 517 aa19.12■□□□□ 0.65
FAM49B-214ENST00000519540 CXCR3P49682 368 aa19.12■□□□□ 0.65
FAM49B-214ENST00000519540 SLC5A3P53794 718 aa19.12■□□□□ 0.65
FAM49B-214ENST00000519540 DPYSQ14117 519 aa19.12■□□□□ 0.65
FAM49B-214ENST00000519540 KCNJ11Q14654 390 aa19.12■□□□□ 0.65
FAM49B-214ENST00000519540 MSS51Q4VC12 460 aa19.12■□□□□ 0.65
FAM49B-214ENST00000519540 VARS2Q5ST30 1063 aaKnown RBP19.12■□□□□ 0.65
FAM49B-214ENST00000519540 LEKR1Q6ZMV7 388 aa19.12■□□□□ 0.65
FAM49B-214ENST00000519540 RFX8Q6ZV50 586 aa19.12■□□□□ 0.65
FAM49B-214ENST00000519540 BZW1Q7L1Q6 419 aaKnown RBP19.12■□□□□ 0.65
FAM49B-214ENST00000519540 SCLYQ96I15 445 aa19.12■□□□□ 0.65
FAM49B-214ENST00000519540 OLFM3Q96PB7 478 aa19.12■□□□□ 0.65
FAM49B-214ENST00000519540 TRIM62Q9BVG3 475 aa19.12■□□□□ 0.65
FAM49B-214ENST00000519540 A0A087WUV0 522 aaPredicted RBP19.11■□□□□ 0.65
FAM49B-214ENST00000519540 LOC101059915A0A1B0GWI6 518 aaPredicted RBP19.11■□□□□ 0.65
FAM49B-214ENST00000519540 FAM72CH0Y354 149 aa19.11■□□□□ 0.65
FAM49B-214ENST00000519540 EEF2KO00418 725 aaKnown RBP19.11■□□□□ 0.65
FAM49B-214ENST00000519540 CHADO15335 359 aa19.11■□□□□ 0.65
FAM49B-214ENST00000519540 BANF1O75531 89 aa19.11■□□□□ 0.65
FAM49B-214ENST00000519540 ATN1P54259 1190 aaPredicted RBP19.11■□□□□ 0.65
FAM49B-214ENST00000519540 SEMA3BQ13214 749 aa19.11■□□□□ 0.65
FAM49B-214ENST00000519540 ARL13BQ3SXY8 428 aa19.11■□□□□ 0.65
FAM49B-214ENST00000519540 FAM72AQ5TYM5 149 aa19.11■□□□□ 0.65
FAM49B-214ENST00000519540 FAM72DQ6L9T8 149 aa19.11■□□□□ 0.65
FAM49B-214ENST00000519540 C4orf22Q6V702 233 aa19.11■□□□□ 0.65
FAM49B-214ENST00000519540 FAM72BQ86X60 149 aa19.11■□□□□ 0.65
FAM49B-214ENST00000519540 CCDC13Q8IYE1 715 aa19.11■□□□□ 0.65
FAM49B-214ENST00000519540 CCDC33Q8N5R6 958 aa19.11■□□□□ 0.65
FAM49B-214ENST00000519540 WDCPQ9H6R7 721 aa19.11■□□□□ 0.65
FAM49B-214ENST00000519540 RAB6BQ9NRW1 208 aa19.11■□□□□ 0.65
FAM49B-214ENST00000519540 ABI2Q9NYB9 513 aaPredicted RBP19.11■□□□□ 0.65
FAM49B-214ENST00000519540 TTC3P53804 2025 aa19.11■□□□□ 0.65
FAM49B-214ENST00000519540 ZNF638Q14966 1978 aaKnown RBP19.1■□□□□ 0.65
FAM49B-214ENST00000519540 HACD1B0YJ81 288 aa19.1■□□□□ 0.65
FAM49B-214ENST00000519540 GCATO75600 419 aa19.1■□□□□ 0.65
FAM49B-214ENST00000519540 IVLP07476 585 aa19.1■□□□□ 0.65
FAM49B-214ENST00000519540 HCAR3P49019 387 aa19.1■□□□□ 0.65
FAM49B-214ENST00000519540 MRPL58Q14197 206 aaKnown RBP19.1■□□□□ 0.65
FAM49B-214ENST00000519540 NFE2Q16621 373 aaPredicted RBP19.1■□□□□ 0.65
FAM49B-214ENST00000519540 FAM171A1Q5VUB5 890 aa19.1■□□□□ 0.65
FAM49B-214ENST00000519540 ANKRD33Q7Z3H0 272 aa19.1■□□□□ 0.65
FAM49B-214ENST00000519540 TAC4Q86UU9 113 aa19.1■□□□□ 0.65
FAM49B-214ENST00000519540 PDIK1LQ8N165 341 aa19.1■□□□□ 0.65
FAM49B-214ENST00000519540 CCDC110Q8TBZ0 833 aa19.1■□□□□ 0.65
FAM49B-214ENST00000519540 FUBP3Q96I24 572 aaKnown RBP eCLIP19.1■□□□□ 0.651e-12■■■■□ 26.4
FAM49B-214ENST00000519540 GPR62Q9BZJ7 368 aa19.1■□□□□ 0.65
FAM49B-214ENST00000519540 HIPK3Q9H422 1215 aa19.1■□□□□ 0.65
FAM49B-214ENST00000519540 ZMYND8Q9ULU4 1186 aaPredicted RBP19.1■□□□□ 0.65
FAM49B-214ENST00000519540 SF3B1O75533 1304 aaKnown RBP eCLIP19.1■□□□□ 0.653e-6■■■■■ 134.6
FAM49B-214ENST00000519540 MFSD11O43934 449 aa19.1■□□□□ 0.65
FAM49B-214ENST00000519540 CXCL10P02778 98 aa19.1■□□□□ 0.65
FAM49B-214ENST00000519540 SLC11A1P49279 550 aa19.1■□□□□ 0.65
FAM49B-214ENST00000519540 CCL23P55773 120 aa19.1■□□□□ 0.65
FAM49B-214ENST00000519540 YWHAGP61981 247 aaKnown RBP eCLIP19.1■□□□□ 0.65
FAM49B-214ENST00000519540 PAFAH1B3Q15102 231 aaKnown RBP19.1■□□□□ 0.65
FAM49B-214ENST00000519540 SLC39A5Q6ZMH5 540 aa19.1■□□□□ 0.65
FAM49B-214ENST00000519540 CEP57Q86XR8 500 aa19.1■□□□□ 0.65
FAM49B-214ENST00000519540 NPAS4Q8IUM7 802 aa19.1■□□□□ 0.65
FAM49B-214ENST00000519540 ANKMY2Q8IV38 441 aa19.1■□□□□ 0.65
FAM49B-214ENST00000519540 SCN4BQ8IWT1 228 aa19.1■□□□□ 0.65
FAM49B-214ENST00000519540 DQX1Q8TE96 717 aaKnown RBP19.1■□□□□ 0.65
FAM49B-214ENST00000519540 TFB1MQ8WVM0 346 aaKnown RBP19.1■□□□□ 0.65
FAM49B-214ENST00000519540 MARCH5Q9NX47 278 aa19.1■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms