RNA–Protein interactions for RNA: ENST00000518882.2

PCDHGA11-202, Transcript of protocadherin gamma subfamily A, 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDHGA11, Length 2,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11-202ENST00000518882 KIF3CO14782 793 aa17.12■□□□□ 0.33
PCDHGA11-202ENST00000518882 GABBR2O75899 941 aa17.12■□□□□ 0.33
PCDHGA11-202ENST00000518882 C6orf222P0C671 652 aaPredicted RBP17.12■□□□□ 0.33
PCDHGA11-202ENST00000518882 UBTFL6P0CB48 400 aaPredicted RBP17.12■□□□□ 0.33
PCDHGA11-202ENST00000518882 ATICP31939 592 aa17.12■□□□□ 0.33
PCDHGA11-202ENST00000518882 ATXN1P54253 815 aaKnown RBP17.12■□□□□ 0.33
PCDHGA11-202ENST00000518882 GOLGA7BQ2TAP0 167 aa17.12■□□□□ 0.33
PCDHGA11-202ENST00000518882 C11orf91Q3C1V1 193 aa17.12■□□□□ 0.33
PCDHGA11-202ENST00000518882 SLC10A6Q3KNW5 377 aa17.12■□□□□ 0.33
PCDHGA11-202ENST00000518882 FASTKD1Q53R41 847 aaKnown RBP17.12■□□□□ 0.33
PCDHGA11-202ENST00000518882 IZUMO2Q6UXV1 221 aa17.12■□□□□ 0.33
PCDHGA11-202ENST00000518882 CPB2Q96IY4 423 aa17.12■□□□□ 0.33
PCDHGA11-202ENST00000518882 DDX50Q9BQ39 737 aaKnown RBP17.12■□□□□ 0.33
PCDHGA11-202ENST00000518882 IFT122Q9HBG6 1241 aa17.12■□□□□ 0.33
PCDHGA11-202ENST00000518882 PAPOLBQ9NRJ5 636 aaKnown RBP17.12■□□□□ 0.33
PCDHGA11-202ENST00000518882 THAP1Q9NVV9 213 aa17.12■□□□□ 0.33
PCDHGA11-202ENST00000518882 DDX43Q9NXZ2 648 aaKnown RBP17.12■□□□□ 0.33
PCDHGA11-202ENST00000518882 MOCS1Q9NZB8 636 aa17.12■□□□□ 0.33
PCDHGA11-202ENST00000518882 A0A088AWK7 358 aa17.11■□□□□ 0.33
PCDHGA11-202ENST00000518882 MAGEA13PA6NCF6 341 aa17.11■□□□□ 0.33
PCDHGA11-202ENST00000518882 NOP56O00567 594 aaKnown RBP17.11■□□□□ 0.33
PCDHGA11-202ENST00000518882 DPYSL4O14531 572 aa17.11■□□□□ 0.33
PCDHGA11-202ENST00000518882 CIB2O75838 187 aa17.11■□□□□ 0.33
PCDHGA11-202ENST00000518882 CYP2F1P24903 491 aa17.11■□□□□ 0.33
PCDHGA11-202ENST00000518882 CRADDP78560 199 aa17.11■□□□□ 0.33
PCDHGA11-202ENST00000518882 DNAL1Q4LDG9 190 aa17.11■□□□□ 0.33
PCDHGA11-202ENST00000518882 PPP1R26Q5T8A7 1209 aaPredicted RBP17.11■□□□□ 0.33
PCDHGA11-202ENST00000518882 MBLAC2Q68D91 279 aa17.11■□□□□ 0.33
PCDHGA11-202ENST00000518882 SLC30A9Q6PML9 568 aa17.11■□□□□ 0.33
PCDHGA11-202ENST00000518882 NCAPG2Q86XI2 1143 aa17.11■□□□□ 0.33
PCDHGA11-202ENST00000518882 GSTCDQ8NEC7 633 aa17.11■□□□□ 0.33
PCDHGA11-202ENST00000518882 ZNF670Q9BS34 389 aa17.11■□□□□ 0.33
PCDHGA11-202ENST00000518882 B3GNT5Q9BYG0 378 aa17.11■□□□□ 0.33
PCDHGA11-202ENST00000518882 NFKBIEO00221 500 aa17.1■□□□□ 0.33
PCDHGA11-202ENST00000518882 GCATO75600 419 aa17.1■□□□□ 0.33
PCDHGA11-202ENST00000518882 AOC1P19801 751 aa17.1■□□□□ 0.33
PCDHGA11-202ENST00000518882 PAPOLAP51003 745 aaKnown RBP17.1■□□□□ 0.33
PCDHGA11-202ENST00000518882 RPL10AP62906 217 aaKnown RBP17.1■□□□□ 0.33
PCDHGA11-202ENST00000518882 SLC25A3Q00325 362 aa17.1■□□□□ 0.33
PCDHGA11-202ENST00000518882 TEDDM1Q5T9Z0 273 aa17.1■□□□□ 0.33
PCDHGA11-202ENST00000518882 ARCQ7LC44 396 aa17.1■□□□□ 0.33
PCDHGA11-202ENST00000518882 TTC30AQ86WT1 665 aa17.1■□□□□ 0.33
PCDHGA11-202ENST00000518882 CCNJLQ8IV13 435 aa17.1■□□□□ 0.33
PCDHGA11-202ENST00000518882 C1orf21Q9H246 121 aa17.1■□□□□ 0.33
PCDHGA11-202ENST00000518882 MFHAS1Q9Y4C4 1052 aa17.1■□□□□ 0.33
PCDHGA11-202ENST00000518882 SOCS7O14512 581 aa17.1■□□□□ 0.33
PCDHGA11-202ENST00000518882 MDM4O15151 490 aa17.1■□□□□ 0.33
PCDHGA11-202ENST00000518882 BAG2O95816 211 aa17.1■□□□□ 0.33
PCDHGA11-202ENST00000518882 ALDOAP04075 364 aaKnown RBP17.1■□□□□ 0.33
PCDHGA11-202ENST00000518882 FGF3P11487 239 aaPredicted RBP17.1■□□□□ 0.33
PCDHGA11-202ENST00000518882 TPSB2P20231 275 aa17.1■□□□□ 0.33
PCDHGA11-202ENST00000518882 KCNA4P22459 653 aa17.1■□□□□ 0.33
PCDHGA11-202ENST00000518882 SDC4P31431 198 aa17.1■□□□□ 0.33
PCDHGA11-202ENST00000518882 AP2B1P63010 937 aa17.1■□□□□ 0.33
PCDHGA11-202ENST00000518882 PDE1BQ01064 536 aa17.1■□□□□ 0.33
PCDHGA11-202ENST00000518882 TPSAB1Q15661 275 aa17.1■□□□□ 0.33
PCDHGA11-202ENST00000518882 TBCCQ15814 346 aa17.1■□□□□ 0.33
PCDHGA11-202ENST00000518882 AMHR2Q16671 573 aa17.1■□□□□ 0.33
PCDHGA11-202ENST00000518882 RABGAP1LQ5R372 815 aa17.1■□□□□ 0.33
PCDHGA11-202ENST00000518882 CELF3Q5SZQ8 465 aaKnown RBP17.1■□□□□ 0.33
PCDHGA11-202ENST00000518882 TIFABQ6ZNK6 161 aa17.1■□□□□ 0.33
PCDHGA11-202ENST00000518882 PLPPR4Q7Z2D5 763 aa17.1■□□□□ 0.33
PCDHGA11-202ENST00000518882 MAVSQ7Z434 540 aa17.1■□□□□ 0.33
PCDHGA11-202ENST00000518882 RIOX2Q8IUF8 465 aa17.1■□□□□ 0.33
PCDHGA11-202ENST00000518882 POU5F2Q8N7G0 328 aa17.1■□□□□ 0.33
PCDHGA11-202ENST00000518882 USP6NLQ92738 828 aa17.1■□□□□ 0.33
PCDHGA11-202ENST00000518882 COPS5Q92905 334 aa17.1■□□□□ 0.33
PCDHGA11-202ENST00000518882 PIH1D1Q9NWS0 290 aaKnown RBP17.1■□□□□ 0.33
PCDHGA11-202ENST00000518882 NDE1Q9NXR1 346 aa17.1■□□□□ 0.33
PCDHGA11-202ENST00000518882 DNAJC16Q9Y2G8 782 aa17.1■□□□□ 0.33
PCDHGA11-202ENST00000518882 ZSWIM8A7E2V4 1837 aa17.1■□□□□ 0.33
PCDHGA11-202ENST00000518882 WDR27A2RRH5 827 aa17.09■□□□□ 0.33
PCDHGA11-202ENST00000518882 CLGNO14967 610 aa17.09■□□□□ 0.33
PCDHGA11-202ENST00000518882 SORBS2O94875 1100 aaKnown RBP17.09■□□□□ 0.33
PCDHGA11-202ENST00000518882 PGK2P07205 417 aa17.09■□□□□ 0.33
PCDHGA11-202ENST00000518882 P4HA1P13674 534 aa17.09■□□□□ 0.33
PCDHGA11-202ENST00000518882 L1CAMP32004 1257 aa17.09■□□□□ 0.33
PCDHGA11-202ENST00000518882 SERPINB9P50453 376 aa17.09■□□□□ 0.33
PCDHGA11-202ENST00000518882 DSG1Q02413 1049 aa17.09■□□□□ 0.33
PCDHGA11-202ENST00000518882 SMAD1Q15797 465 aaKnown RBP17.09■□□□□ 0.33
PCDHGA11-202ENST00000518882 N4BP2L1Q5TBK1 243 aaPredicted RBP17.09■□□□□ 0.33
PCDHGA11-202ENST00000518882 C6orf163Q5TEZ5 329 aa17.09■□□□□ 0.33
PCDHGA11-202ENST00000518882 KCNT2Q6UVM3 1135 aa17.09■□□□□ 0.33
PCDHGA11-202ENST00000518882 KYAT3Q6YP21 454 aaKnown RBP17.09■□□□□ 0.33
PCDHGA11-202ENST00000518882 RAPH1Q70E73 1250 aa17.09■□□□□ 0.33
PCDHGA11-202ENST00000518882 CDKL3Q8IVW4 592 aaPredicted RBP17.09■□□□□ 0.33
PCDHGA11-202ENST00000518882 PIWIL2Q8TC59 973 aaKnown RBP17.09■□□□□ 0.33
PCDHGA11-202ENST00000518882 ECSITQ9BQ95 431 aa17.09■□□□□ 0.33
PCDHGA11-202ENST00000518882 NT5C1AQ9BXI3 368 aa17.09■□□□□ 0.33
PCDHGA11-202ENST00000518882 PDZD7Q9H5P4 517 aa17.09■□□□□ 0.33
PCDHGA11-202ENST00000518882 SOX13Q9UN79 622 aa17.09■□□□□ 0.33
PCDHGA11-202ENST00000518882 PAPPA2Q9BXP8 1791 aa17.09■□□□□ 0.33
PCDHGA11-202ENST00000518882 POLR2AP24928 1970 aaKnown RBP17.09■□□□□ 0.33
PCDHGA11-202ENST00000518882 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.09■□□□□ 0.33
PCDHGA11-202ENST00000518882 PAPSS1O43252 624 aaPredicted RBP17.09■□□□□ 0.33
PCDHGA11-202ENST00000518882 ARRB2P32121 409 aa17.09■□□□□ 0.33
PCDHGA11-202ENST00000518882 GMPRP36959 345 aa17.09■□□□□ 0.33
PCDHGA11-202ENST00000518882 SLC6A3Q01959 620 aa17.09■□□□□ 0.33
PCDHGA11-202ENST00000518882 CDC16Q13042 620 aa17.09■□□□□ 0.33
PCDHGA11-202ENST00000518882 TMEM132DQ14C87 1099 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms