RNA–Protein interactions for RNA: ENST00000517824.5

SPIDR-204, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 5

Gene SPIDR, Length 849 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-204ENST00000517824 ZNF623O75123 536 aa11.15□□□□□ -0.62
SPIDR-204ENST00000517824 LTFP02788 710 aa11.15□□□□□ -0.62
SPIDR-204ENST00000517824 L1CAMP32004 1257 aa11.15□□□□□ -0.62
SPIDR-204ENST00000517824 BMP8BP34820 402 aa11.15□□□□□ -0.62
SPIDR-204ENST00000517824 MSH2P43246 934 aa11.15□□□□□ -0.62
SPIDR-204ENST00000517824 RPL34P49207 117 aaKnown RBP11.15□□□□□ -0.62
SPIDR-204ENST00000517824 ACLYP53396 1101 aa11.15□□□□□ -0.62
SPIDR-204ENST00000517824 SEC24CP53992 1094 aa11.15□□□□□ -0.62
SPIDR-204ENST00000517824 IL9RQ01113 521 aa11.15□□□□□ -0.62
SPIDR-204ENST00000517824 PDK1Q15118 436 aa11.15□□□□□ -0.62
SPIDR-204ENST00000517824 CA9Q16790 459 aa11.15□□□□□ -0.62
SPIDR-204ENST00000517824 INTS6LQ5JSJ4 861 aaKnown RBP11.15□□□□□ -0.62
SPIDR-204ENST00000517824 AGMOQ6ZNB7 445 aa11.15□□□□□ -0.62
SPIDR-204ENST00000517824 CCDC121Q6ZUS5 278 aa11.15□□□□□ -0.62
SPIDR-204ENST00000517824 CYP4V2Q6ZWL3 525 aaPredicted RBP11.15□□□□□ -0.62
SPIDR-204ENST00000517824 SPATA2LQ8IUW3 424 aaPredicted RBP11.15□□□□□ -0.62
SPIDR-204ENST00000517824 ABI1Q8IZP0 508 aa11.15□□□□□ -0.62
SPIDR-204ENST00000517824 OTUD6BQ8N6M0 293 aa11.15□□□□□ -0.62
SPIDR-204ENST00000517824 CCDC185Q8N715 623 aa11.15□□□□□ -0.62
SPIDR-204ENST00000517824 NAT8LQ8N9F0 302 aa11.15□□□□□ -0.62
SPIDR-204ENST00000517824 FBXO36Q8NEA4 188 aa11.15□□□□□ -0.62
SPIDR-204ENST00000517824 KLHDC9Q8NEP7 349 aa11.15□□□□□ -0.62
SPIDR-204ENST00000517824 PCDH19Q8TAB3 1148 aa11.15□□□□□ -0.62
SPIDR-204ENST00000517824 MDM1Q8TC05 714 aa11.15□□□□□ -0.62
SPIDR-204ENST00000517824 RNF139Q8WU17 664 aa11.15□□□□□ -0.62
SPIDR-204ENST00000517824 CENPIQ92674 756 aaPredicted RBP11.15□□□□□ -0.62
SPIDR-204ENST00000517824 MRRFQ96E11 262 aaKnown RBP11.15□□□□□ -0.62
SPIDR-204ENST00000517824 CFAP36Q96G28 342 aa11.15□□□□□ -0.62
SPIDR-204ENST00000517824 CSPG4P5Q96PW8 444 aa11.15□□□□□ -0.62
SPIDR-204ENST00000517824 EPAS1Q99814 870 aa11.15□□□□□ -0.62
SPIDR-204ENST00000517824 TRABDQ9H4I3 376 aa11.15□□□□□ -0.62
SPIDR-204ENST00000517824 AGO3Q9H9G7 860 aaKnown RBP11.15□□□□□ -0.62
SPIDR-204ENST00000517824 CRTAC1Q9NQ79 661 aa11.15□□□□□ -0.62
SPIDR-204ENST00000517824 CACNG4Q9UBN1 327 aa11.15□□□□□ -0.62
SPIDR-204ENST00000517824 CTNNAL1Q9UBT7 734 aa11.15□□□□□ -0.62
SPIDR-204ENST00000517824 FZD10Q9ULW2 581 aa11.15□□□□□ -0.62
SPIDR-204ENST00000517824 SMG5Q9UPR3 1016 aaKnown RBP11.15□□□□□ -0.62
SPIDR-204ENST00000517824 CHMP2BQ9UQN3 213 aa11.15□□□□□ -0.62
SPIDR-204ENST00000517824 TIMM13Q9Y5L4 95 aaPredicted RBP11.15□□□□□ -0.62
SPIDR-204ENST00000517824 SF3B1O75533 1304 aaKnown RBP eCLIP11.14□□□□□ -0.633e-8■■■■■ 80.3
SPIDR-204ENST00000517824 A0A0U1RQF3 1178 aa11.14□□□□□ -0.63
SPIDR-204ENST00000517824 IQANK1A0A1B0GTG1 560 aa11.14□□□□□ -0.63
SPIDR-204ENST00000517824 MEIS3P2A8K0S8 358 aa11.14□□□□□ -0.63
SPIDR-204ENST00000517824 TP73O15350 636 aa11.14□□□□□ -0.63
SPIDR-204ENST00000517824 F9P00740 461 aa11.14□□□□□ -0.63
SPIDR-204ENST00000517824 INHBAP08476 426 aa11.14□□□□□ -0.63
SPIDR-204ENST00000517824 NCAM1P13591 858 aa11.14□□□□□ -0.63
SPIDR-204ENST00000517824 RBL1P28749 1068 aa11.14□□□□□ -0.63
SPIDR-204ENST00000517824 SERPINB6P35237 376 aa11.14□□□□□ -0.63
SPIDR-204ENST00000517824 FDFT1P37268 417 aa11.14□□□□□ -0.63
SPIDR-204ENST00000517824 ZNF135P52742 658 aaPredicted RBP11.14□□□□□ -0.63
SPIDR-204ENST00000517824 DAOAP59103 153 aa11.14□□□□□ -0.63
SPIDR-204ENST00000517824 UPP1Q16831 310 aa11.14□□□□□ -0.63
SPIDR-204ENST00000517824 PAN2Q504Q3 1202 aaKnown RBP11.14□□□□□ -0.63
SPIDR-204ENST00000517824 RAB6CQ53S08 254 aa11.14□□□□□ -0.63
SPIDR-204ENST00000517824 FAM26DQ5JW98 314 aa11.14□□□□□ -0.63
SPIDR-204ENST00000517824 UBAP2Q5T6F2 1119 aaKnown RBP11.14□□□□□ -0.63
SPIDR-204ENST00000517824 ANKRD22Q5VYY1 191 aa11.14□□□□□ -0.63
SPIDR-204ENST00000517824 SRLQ86TD4 932 aa11.14□□□□□ -0.63
SPIDR-204ENST00000517824 ECHDC2Q86YB7 292 aa11.14□□□□□ -0.63
SPIDR-204ENST00000517824 TDRPQ86YL5 185 aa11.14□□□□□ -0.63
SPIDR-204ENST00000517824 PQLC3Q8N755 202 aa11.14□□□□□ -0.63
SPIDR-204ENST00000517824 CCDC197Q8NCU1 140 aa11.14□□□□□ -0.63
SPIDR-204ENST00000517824 HASPINQ8TF76 798 aa11.14□□□□□ -0.63
SPIDR-204ENST00000517824 IRGQQ8WZA9 623 aa11.14□□□□□ -0.63
SPIDR-204ENST00000517824 PCED1BQ96HM7 432 aa11.14□□□□□ -0.63
SPIDR-204ENST00000517824 SGSM3Q96HU1 749 aa11.14□□□□□ -0.63
SPIDR-204ENST00000517824 CABS1Q96KC9 395 aa11.14□□□□□ -0.63
SPIDR-204ENST00000517824 SLC2A13Q96QE2 648 aa11.14□□□□□ -0.63
SPIDR-204ENST00000517824 CYTH2Q99418 400 aa11.14□□□□□ -0.63
SPIDR-204ENST00000517824 PRMT1Q99873 361 aaKnown RBP11.14□□□□□ -0.63
SPIDR-204ENST00000517824 PAIP2Q9BPZ3 127 aaKnown RBP11.14□□□□□ -0.63
SPIDR-204ENST00000517824 TSEN34Q9BSV6 310 aaKnown RBP11.14□□□□□ -0.63
SPIDR-204ENST00000517824 RAB6CQ9H0N0 254 aa11.14□□□□□ -0.63
SPIDR-204ENST00000517824 C11orf49Q9H6J7 331 aa11.14□□□□□ -0.63
SPIDR-204ENST00000517824 XAB2Q9HCS7 855 aaKnown RBP11.14□□□□□ -0.63
SPIDR-204ENST00000517824 STARD7Q9NQZ5 370 aa11.14□□□□□ -0.63
SPIDR-204ENST00000517824 TRMT13Q9NUP7 481 aaKnown RBP11.14□□□□□ -0.63
SPIDR-204ENST00000517824 ETNK2Q9NVF9 386 aa11.14□□□□□ -0.63
SPIDR-204ENST00000517824 DDIT4Q9NX09 232 aa11.14□□□□□ -0.63
SPIDR-204ENST00000517824 SEPT10Q9P0V9 454 aa11.14□□□□□ -0.63
SPIDR-204ENST00000517824 FETUBQ9UGM5 382 aa11.14□□□□□ -0.63
SPIDR-204ENST00000517824 PRDM4Q9UKN5 801 aa11.14□□□□□ -0.63
SPIDR-204ENST00000517824 NAALADL1Q9UQQ1 740 aa11.14□□□□□ -0.63
SPIDR-204ENST00000517824 RAD54BQ9Y620 910 aa11.14□□□□□ -0.63
SPIDR-204ENST00000517824 VWA8A3KMH1 1905 aa11.13□□□□□ -0.63
SPIDR-204ENST00000517824 FAM47DPA6NHR8 397 aa11.13□□□□□ -0.63
SPIDR-204ENST00000517824 I3L4J1 428 aa11.13□□□□□ -0.63
SPIDR-204ENST00000517824 TMEM63AO94886 807 aa11.13□□□□□ -0.63
SPIDR-204ENST00000517824 APRTP07741 180 aa11.13□□□□□ -0.63
SPIDR-204ENST00000517824 GSTA2P09210 222 aa11.13□□□□□ -0.63
SPIDR-204ENST00000517824 COL6A1P12109 1028 aa11.13□□□□□ -0.63
SPIDR-204ENST00000517824 GOT1P17174 413 aa11.13□□□□□ -0.63
SPIDR-204ENST00000517824 SYN1P17600 705 aa11.13□□□□□ -0.63
SPIDR-204ENST00000517824 TFE3P19532 575 aaPredicted RBP11.13□□□□□ -0.63
SPIDR-204ENST00000517824 TYMPP19971 482 aa11.13□□□□□ -0.63
SPIDR-204ENST00000517824 AMPD1P23109 780 aa11.13□□□□□ -0.63
SPIDR-204ENST00000517824 MAGEA10P43363 369 aaPredicted RBP11.13□□□□□ -0.63
SPIDR-204ENST00000517824 ADCY1Q08828 1119 aa11.13□□□□□ -0.63
SPIDR-204ENST00000517824 AP1B1Q10567 949 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms