RNA–Protein interactions for RNA: ENST00000517514.1

CLN8-202, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 4

Gene CLN8, Length 568 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-202ENST00000517514 UVRAGQ9P2Y5 699 aa10.3□□□□□ -0.76
CLN8-202ENST00000517514 XPO7Q9UIA9 1087 aaKnown RBP10.3□□□□□ -0.76
CLN8-202ENST00000517514 ZMYM5Q9UJ78 669 aa10.3□□□□□ -0.76
CLN8-202ENST00000517514 ANAPC7Q9UJX3 599 aa10.3□□□□□ -0.76
CLN8-202ENST00000517514 PPP2R2CQ9Y2T4 447 aa10.3□□□□□ -0.76
CLN8-202ENST00000517514 ZFP37Q9Y6Q3 630 aaPredicted RBP10.3□□□□□ -0.76
CLN8-202ENST00000517514 TICRRQ7Z2Z1 1910 aa10.3□□□□□ -0.76
CLN8-202ENST00000517514 MIA3Q5JRA6 1907 aa10.29□□□□□ -0.76
CLN8-202ENST00000517514 A0A0C4DFX4 3053 aa10.29□□□□□ -0.76
CLN8-202ENST00000517514 C19orf67A6NJJ6 358 aa10.29□□□□□ -0.76
CLN8-202ENST00000517514 USP27XA6NNY8 438 aa10.29□□□□□ -0.76
CLN8-202ENST00000517514 HEPACAM2A8MVW5 462 aa10.29□□□□□ -0.76
CLN8-202ENST00000517514 GFRA2O00451 464 aa10.29□□□□□ -0.76
CLN8-202ENST00000517514 CAPN9O14815 690 aa10.29□□□□□ -0.76
CLN8-202ENST00000517514 LRCH4O75427 683 aa10.29□□□□□ -0.76
CLN8-202ENST00000517514 IRF1P10914 325 aa10.29□□□□□ -0.76
CLN8-202ENST00000517514 IL1R2P27930 398 aa10.29□□□□□ -0.76
CLN8-202ENST00000517514 SDC4P31431 198 aa10.29□□□□□ -0.76
CLN8-202ENST00000517514 KRT83P78385 493 aa10.29□□□□□ -0.76
CLN8-202ENST00000517514 RING1Q06587 406 aa10.29□□□□□ -0.76
CLN8-202ENST00000517514 NNTQ13423 1086 aa10.29□□□□□ -0.76
CLN8-202ENST00000517514 CDO1Q16878 200 aa10.29□□□□□ -0.76
CLN8-202ENST00000517514 TXNRD3NBQ6F5E7 133 aa10.29□□□□□ -0.76
CLN8-202ENST00000517514 NADSYN1Q6IA69 706 aa10.29□□□□□ -0.76
CLN8-202ENST00000517514 DCUN1D2Q6PH85 259 aa10.29□□□□□ -0.76
CLN8-202ENST00000517514 ZNF662Q6ZS27 426 aa10.29□□□□□ -0.76
CLN8-202ENST00000517514 STRADAQ7RTN6 431 aa10.29□□□□□ -0.76
CLN8-202ENST00000517514 CCDC185Q8N715 623 aa10.29□□□□□ -0.76
CLN8-202ENST00000517514 TPCN2Q8NHX9 752 aa10.29□□□□□ -0.76
CLN8-202ENST00000517514 FAM172AQ8WUF8 416 aa10.29□□□□□ -0.76
CLN8-202ENST00000517514 GOLGA1Q92805 767 aa10.29□□□□□ -0.76
CLN8-202ENST00000517514 MYEOVQ96EZ4 313 aa10.29□□□□□ -0.76
CLN8-202ENST00000517514 RPGRIP1Q96KN7 1286 aa10.29□□□□□ -0.76
CLN8-202ENST00000517514 ASB2Q96Q27 587 aa10.29□□□□□ -0.76
CLN8-202ENST00000517514 CDK5RAP1Q96SZ6 601 aaKnown RBP10.29□□□□□ -0.76
CLN8-202ENST00000517514 KXD1Q9BQD3 176 aa10.29□□□□□ -0.76
CLN8-202ENST00000517514 TRIM62Q9BVG3 475 aa10.29□□□□□ -0.76
CLN8-202ENST00000517514 GOLPH3Q9H4A6 298 aa10.29□□□□□ -0.76
CLN8-202ENST00000517514 MRPL47Q9HD33 250 aaKnown RBP10.29□□□□□ -0.76
CLN8-202ENST00000517514 CD320Q9NPF0 282 aa10.29□□□□□ -0.76
CLN8-202ENST00000517514 DDIT4Q9NX09 232 aa10.29□□□□□ -0.76
CLN8-202ENST00000517514 ARHGEF38Q9NXL2 777 aa10.29□□□□□ -0.76
CLN8-202ENST00000517514 RRN3Q9NYV6 651 aa10.29□□□□□ -0.76
CLN8-202ENST00000517514 CFAP97Q9P2B7 532 aa10.29□□□□□ -0.76
CLN8-202ENST00000517514 TLR6Q9Y2C9 796 aa10.29□□□□□ -0.76
CLN8-202ENST00000517514 HBS1LQ9Y450 684 aaKnown RBP10.29□□□□□ -0.76
CLN8-202ENST00000517514 PAXBP1Q9Y5B6 917 aa10.29□□□□□ -0.76
CLN8-202ENST00000517514 SYNJ2BP-COX16A0A087WUM0 186 aa10.28□□□□□ -0.76
CLN8-202ENST00000517514 ARNTLO00327 626 aa10.28□□□□□ -0.76
CLN8-202ENST00000517514 BUB1O43683 1085 aa10.28□□□□□ -0.76
CLN8-202ENST00000517514 BUB1BO60566 1050 aaPredicted RBP10.28□□□□□ -0.76
CLN8-202ENST00000517514 ECI2O75521 394 aa10.28□□□□□ -0.76
CLN8-202ENST00000517514 PROSCO94903 275 aa10.28□□□□□ -0.76
CLN8-202ENST00000517514 ASGR2P07307 311 aa10.28□□□□□ -0.76
CLN8-202ENST00000517514 PSMA2P25787 234 aa10.28□□□□□ -0.76
CLN8-202ENST00000517514 AVPR1AP37288 418 aa10.28□□□□□ -0.76
CLN8-202ENST00000517514 TBX4P57082 545 aa10.28□□□□□ -0.76
CLN8-202ENST00000517514 TAS2R40P59535 323 aa10.28□□□□□ -0.76
CLN8-202ENST00000517514 DEUP1Q05D60 604 aa10.28□□□□□ -0.76
CLN8-202ENST00000517514 NME3Q13232 169 aa10.28□□□□□ -0.76
CLN8-202ENST00000517514 HTR3DQ70Z44 454 aa10.28□□□□□ -0.76
CLN8-202ENST00000517514 KIAA1328Q86T90 577 aa10.28□□□□□ -0.76
CLN8-202ENST00000517514 TADA2BQ86TJ2 420 aa10.28□□□□□ -0.76
CLN8-202ENST00000517514 FAM131BQ86XD5 332 aa10.28□□□□□ -0.76
CLN8-202ENST00000517514 MFSD6LQ8IWD5 586 aa10.28□□□□□ -0.76
CLN8-202ENST00000517514 ADHFE1Q8IWW8 467 aa10.28□□□□□ -0.76
CLN8-202ENST00000517514 RHOT2Q8IXI1 618 aa10.28□□□□□ -0.76
CLN8-202ENST00000517514 ZNF683Q8IZ20 524 aa10.28□□□□□ -0.76
CLN8-202ENST00000517514 CELF5Q8N6W0 485 aaKnown RBP10.28□□□□□ -0.76
CLN8-202ENST00000517514 LRRC57Q8N9N7 239 aa10.28□□□□□ -0.76
CLN8-202ENST00000517514 TDRD5Q8NAT2 981 aaKnown RBP10.28□□□□□ -0.76
CLN8-202ENST00000517514 ATXN2LQ8WWM7 1075 aaKnown RBP10.28□□□□□ -0.76
CLN8-202ENST00000517514 ELSPBP1Q96BH3 223 aa10.28□□□□□ -0.76
CLN8-202ENST00000517514 SERPINB11Q96P15 392 aa10.28□□□□□ -0.76
CLN8-202ENST00000517514 PRMT1Q99873 361 aaKnown RBP10.28□□□□□ -0.76
CLN8-202ENST00000517514 LINC00597Q9H2U6 94 aa10.28□□□□□ -0.76
CLN8-202ENST00000517514 FAM204AQ9H8W3 233 aa10.28□□□□□ -0.76
CLN8-202ENST00000517514 OBP2AQ9NY56 170 aa10.28□□□□□ -0.76
CLN8-202ENST00000517514 COX16Q9P0S2 106 aa10.28□□□□□ -0.76
CLN8-202ENST00000517514 LIMD1Q9UGP4 676 aa10.28□□□□□ -0.76
CLN8-202ENST00000517514 AGO1Q9UL18 857 aaKnown RBP10.28□□□□□ -0.76
CLN8-202ENST00000517514 HYOU1Q9Y4L1 999 aa10.28□□□□□ -0.76
CLN8-202ENST00000517514 SNX10Q9Y5X0 201 aa10.28□□□□□ -0.76
CLN8-202ENST00000517514 NUMBLQ9Y6R0 609 aa10.28□□□□□ -0.76
CLN8-202ENST00000517514 KIAA1549LQ6ZVL6 1849 aa10.28□□□□□ -0.76
CLN8-202ENST00000517514 GOLGA6L7A0A1B0GV03 622 aa10.27□□□□□ -0.77
CLN8-202ENST00000517514 E2F8A0AVK6 867 aa10.27□□□□□ -0.77
CLN8-202ENST00000517514 GRID2IPA4D2P6 1211 aa10.27□□□□□ -0.77
CLN8-202ENST00000517514 OTOL1A6NHN0 477 aaPredicted RBP10.27□□□□□ -0.77
CLN8-202ENST00000517514 MYO1FO00160 1098 aa10.27□□□□□ -0.77
CLN8-202ENST00000517514 MOCS3O95396 460 aa10.27□□□□□ -0.77
CLN8-202ENST00000517514 CCDC175P0C221 793 aa10.27□□□□□ -0.77
CLN8-202ENST00000517514 MIPP30301 263 aa10.27□□□□□ -0.77
CLN8-202ENST00000517514 CORO1AP31146 461 aaKnown RBP10.27□□□□□ -0.77
CLN8-202ENST00000517514 SLC6A4P31645 630 aa10.27□□□□□ -0.77
CLN8-202ENST00000517514 RDXP35241 583 aaKnown RBP10.27□□□□□ -0.77
CLN8-202ENST00000517514 COG7P83436 770 aa10.27□□□□□ -0.77
CLN8-202ENST00000517514 SLC25A11Q02978 314 aaKnown RBP10.27□□□□□ -0.77
CLN8-202ENST00000517514 FCHO2Q0JRZ9 810 aa10.27□□□□□ -0.77
CLN8-202ENST00000517514 GRM2Q14416 872 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms