RNA–Protein interactions for RNA: ENST00000517325.5

CHMP7-203, Transcript of charged multivesicular body protein 7, humanhuman

TSL 2

Gene CHMP7, Length 2,639 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP7-203ENST00000517325 TNIP3Q96KP6 325 aa17.3■□□□□ 0.36
CHMP7-203ENST00000517325 ZFP42Q96MM3 310 aa17.3■□□□□ 0.36
CHMP7-203ENST00000517325 CACNG4Q9UBN1 327 aa17.3■□□□□ 0.36
CHMP7-203ENST00000517325 NKX1-2Q9UD57 310 aaPredicted RBP17.3■□□□□ 0.36
CHMP7-203ENST00000517325 GTF2IRD1Q9UHL9 959 aa17.3■□□□□ 0.36
CHMP7-203ENST00000517325 NR2E3Q9Y5X4 410 aa17.3■□□□□ 0.36
CHMP7-203ENST00000517325 USP3Q9Y6I4 520 aa17.3■□□□□ 0.36
CHMP7-203ENST00000517325 C17orf102A2RUQ5 167 aa17.3■□□□□ 0.36
CHMP7-203ENST00000517325 XPO1O14980 1071 aaKnown RBP17.3■□□□□ 0.36
CHMP7-203ENST00000517325 SPAG6O75602 509 aa17.3■□□□□ 0.36
CHMP7-203ENST00000517325 BEST1O76090 585 aa17.3■□□□□ 0.36
CHMP7-203ENST00000517325 AMPD1P23109 780 aa17.3■□□□□ 0.36
CHMP7-203ENST00000517325 NCBP2-AS2Q69YL0 99 aa17.3■□□□□ 0.36
CHMP7-203ENST00000517325 TWF2Q6IBS0 349 aaKnown RBP17.3■□□□□ 0.36
CHMP7-203ENST00000517325 ZNF276Q8N554 614 aa17.3■□□□□ 0.36
CHMP7-203ENST00000517325 ZNF75CPQ92670 426 aaPredicted RBP17.3■□□□□ 0.36
CHMP7-203ENST00000517325 ARHGEF3Q9NR81 526 aa17.3■□□□□ 0.36
CHMP7-203ENST00000517325 DTLQ9NZJ0 730 aa17.3■□□□□ 0.36
CHMP7-203ENST00000517325 MEIS3P2A8K0S8 358 aa17.29■□□□□ 0.36
CHMP7-203ENST00000517325 FAM155BO75949 473 aa17.29■□□□□ 0.36
CHMP7-203ENST00000517325 INHBAP08476 426 aa17.29■□□□□ 0.36
CHMP7-203ENST00000517325 LINGO3P0C6S8 592 aa17.29■□□□□ 0.36
CHMP7-203ENST00000517325 WARSP23381 471 aaKnown RBP17.29■□□□□ 0.36
CHMP7-203ENST00000517325 MATKP42679 507 aa17.29■□□□□ 0.36
CHMP7-203ENST00000517325 OTUD1Q5VV17 481 aaPredicted RBP17.29■□□□□ 0.36
CHMP7-203ENST00000517325 ZNF534Q76KX8 674 aa17.29■□□□□ 0.36
CHMP7-203ENST00000517325 STRADAQ7RTN6 431 aa17.29■□□□□ 0.36
CHMP7-203ENST00000517325 RNF217Q8TC41 542 aa17.29■□□□□ 0.36
CHMP7-203ENST00000517325 FAM149B1Q96BN6 582 aa17.29■□□□□ 0.36
CHMP7-203ENST00000517325 QKIQ96PU8 341 aaKnown RBP eCLIP17.29■□□□□ 0.36
CHMP7-203ENST00000517325 FRMD8Q9BZ67 464 aaPredicted RBP17.29■□□□□ 0.36
CHMP7-203ENST00000517325 PNPLA8Q9NP80 782 aa17.29■□□□□ 0.36
CHMP7-203ENST00000517325 ZC3H7BQ9UGR2 993 aaKnown RBP17.29■□□□□ 0.36
CHMP7-203ENST00000517325 IKBKGQ9Y6K9 419 aa17.29■□□□□ 0.36
CHMP7-203ENST00000517325 IQANK1A0A1B0GTG1 560 aa17.29■□□□□ 0.36
CHMP7-203ENST00000517325 WDR91A4D1P6 747 aa17.29■□□□□ 0.36
CHMP7-203ENST00000517325 MT-ND3P03897 115 aa17.29■□□□□ 0.36
CHMP7-203ENST00000517325 SULT1E1P49888 294 aa17.29■□□□□ 0.36
CHMP7-203ENST00000517325 PAQR9Q6ZVX9 377 aa17.29■□□□□ 0.36
CHMP7-203ENST00000517325 HNRNPABQ99729 332 aaKnown RBP17.29■□□□□ 0.36
CHMP7-203ENST00000517325 TRIM56Q9BRZ2 755 aaKnown RBP17.29■□□□□ 0.36
CHMP7-203ENST00000517325 DUSP16Q9BY84 665 aa17.29■□□□□ 0.36
CHMP7-203ENST00000517325 AP5M1Q9H0R1 490 aa17.29■□□□□ 0.36
CHMP7-203ENST00000517325 TMPRSS4Q9NRS4 437 aa17.29■□□□□ 0.36
CHMP7-203ENST00000517325 SPATS2LQ9NUQ6 558 aaKnown RBP17.29■□□□□ 0.36
CHMP7-203ENST00000517325 CXorf49A8MYA2 514 aaPredicted RBP17.28■□□□□ 0.36
CHMP7-203ENST00000517325 TM9SF1O15321 606 aa17.28■□□□□ 0.36
CHMP7-203ENST00000517325 GCATO75600 419 aa17.28■□□□□ 0.36
CHMP7-203ENST00000517325 ZFXP17010 805 aaPredicted RBP17.28■□□□□ 0.36
CHMP7-203ENST00000517325 NR2C2P49116 596 aa17.28■□□□□ 0.36
CHMP7-203ENST00000517325 SLC25A52Q3SY17 297 aa17.28■□□□□ 0.36
CHMP7-203ENST00000517325 EFHC1Q5JVL4 640 aa17.28■□□□□ 0.36
CHMP7-203ENST00000517325 WSCD1Q658N2 575 aa17.28■□□□□ 0.36
CHMP7-203ENST00000517325 SH2D5Q6ZV89 423 aa17.28■□□□□ 0.36
CHMP7-203ENST00000517325 VPS52Q8N1B4 723 aa17.28■□□□□ 0.36
CHMP7-203ENST00000517325 TOP6BLQ8N6T0 577 aa17.28■□□□□ 0.36
CHMP7-203ENST00000517325 ALKBH8Q96BT7 664 aaKnown RBP17.28■□□□□ 0.36
CHMP7-203ENST00000517325 TSPAN18Q96SJ8 248 aa17.28■□□□□ 0.36
CHMP7-203ENST00000517325 HOXC8P31273 242 aa17.28■□□□□ 0.36
CHMP7-203ENST00000517325 MAGEA3P43357 314 aa17.28■□□□□ 0.36
CHMP7-203ENST00000517325 NDUFV1P49821 464 aa17.28■□□□□ 0.36
CHMP7-203ENST00000517325 TAF11Q15544 211 aa17.28■□□□□ 0.36
CHMP7-203ENST00000517325 KIAA0319Q5VV43 1072 aa17.28■□□□□ 0.36
CHMP7-203ENST00000517325 OTOAQ7RTW8 1153 aa17.28■□□□□ 0.36
CHMP7-203ENST00000517325 EGFL6Q8IUX8 553 aa17.28■□□□□ 0.36
CHMP7-203ENST00000517325 MCUQ8NE86 351 aa17.28■□□□□ 0.36
CHMP7-203ENST00000517325 PPP1R10Q96QC0 940 aaKnown RBP17.28■□□□□ 0.36
CHMP7-203ENST00000517325 FZD10Q9ULW2 581 aa17.28■□□□□ 0.36
CHMP7-203ENST00000517325 CYB561D2O14569 222 aa17.27■□□□□ 0.36
CHMP7-203ENST00000517325 KIF3CO14782 793 aa17.27■□□□□ 0.36
CHMP7-203ENST00000517325 MAP3K13O43283 966 aa17.27■□□□□ 0.36
CHMP7-203ENST00000517325 AP1G2O75843 785 aa17.27■□□□□ 0.36
CHMP7-203ENST00000517325 VAV1P15498 845 aa17.27■□□□□ 0.36
CHMP7-203ENST00000517325 NPR3P17342 541 aa17.27■□□□□ 0.36
CHMP7-203ENST00000517325 LRPAP1P30533 357 aa17.27■□□□□ 0.36
CHMP7-203ENST00000517325 PURAQ00577 322 aaKnown RBP17.27■□□□□ 0.36
CHMP7-203ENST00000517325 SEPT7Q16181 437 aaKnown RBP17.27■□□□□ 0.36
CHMP7-203ENST00000517325 FSCN1Q16658 493 aaKnown RBP17.27■□□□□ 0.36
CHMP7-203ENST00000517325 DCAF6Q58WW2 860 aa17.27■□□□□ 0.36
CHMP7-203ENST00000517325 CST9Q5W186 159 aa17.27■□□□□ 0.36
CHMP7-203ENST00000517325 ASRGL1Q7L266 308 aa17.27■□□□□ 0.36
CHMP7-203ENST00000517325 PPM1NQ8N819 430 aa17.27■□□□□ 0.36
CHMP7-203ENST00000517325 NETO2Q8NC67 525 aa17.27■□□□□ 0.36
CHMP7-203ENST00000517325 UTP4Q969X6 686 aaKnown RBP17.27■□□□□ 0.36
CHMP7-203ENST00000517325 SMYD2Q9NRG4 433 aa17.27■□□□□ 0.36
CHMP7-203ENST00000517325 SYNJ2BP-COX16A0A087WUM0 186 aa17.27■□□□□ 0.35
CHMP7-203ENST00000517325 LPXNO60711 386 aa17.27■□□□□ 0.35
CHMP7-203ENST00000517325 PTPN1P18031 435 aaKnown RBP17.27■□□□□ 0.35
CHMP7-203ENST00000517325 GRIA1P42261 906 aa17.27■□□□□ 0.35
CHMP7-203ENST00000517325 BLMHQ13867 455 aa17.27■□□□□ 0.35
CHMP7-203ENST00000517325 HEATR6Q6AI08 1181 aaKnown RBP17.27■□□□□ 0.35
CHMP7-203ENST00000517325 SLC26A11Q86WA9 606 aa17.27■□□□□ 0.35
CHMP7-203ENST00000517325 CTAGE3PQ8IX95 158 aa17.27■□□□□ 0.35
CHMP7-203ENST00000517325 MPP5Q8N3R9 675 aa17.27■□□□□ 0.35
CHMP7-203ENST00000517325 OLFM3Q96PB7 478 aa17.27■□□□□ 0.35
CHMP7-203ENST00000517325 KATNAL1Q9BW62 490 aa17.27■□□□□ 0.35
CHMP7-203ENST00000517325 ALG13Q9NP73 1137 aaKnown RBP17.27■□□□□ 0.35
CHMP7-203ENST00000517325 COX16Q9P0S2 106 aa17.27■□□□□ 0.35
CHMP7-203ENST00000517325 MYADML2A6NDP7 307 aa17.26■□□□□ 0.35
CHMP7-203ENST00000517325 MFSD11O43934 449 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms