RNA–Protein interactions for RNA: ENST00000516665.1

RNU6-539P-201, Transcript of RNA, U6 small nuclear 539, pseudogene, humanhuman

BASIC

Gene RNU6-539P, Length 103 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-539P-201ENST00000516665 NDOR1Q9UHB4 597 aa-0.41□□□□□ -2.48
RNU6-539P-201ENST00000516665 SCOCQ9UIL1 159 aa-0.41□□□□□ -2.48
RNU6-539P-201ENST00000516665 MAN1B1Q9UKM7 699 aa-0.41□□□□□ -2.48
RNU6-539P-201ENST00000516665 TDRD15B5MCY1 1934 aaKnown RBP-0.42□□□□□ -2.48
RNU6-539P-201ENST00000516665 A0A087X002 238 aa-0.42□□□□□ -2.48
RNU6-539P-201ENST00000516665 LINC01553A4QN01 128 aa-0.42□□□□□ -2.48
RNU6-539P-201ENST00000516665 NPIPB11E5RHQ5 1161 aa-0.42□□□□□ -2.48
RNU6-539P-201ENST00000516665 CES2O00748 559 aa-0.42□□□□□ -2.48
RNU6-539P-201ENST00000516665 BCL2L11O43521 198 aa-0.42□□□□□ -2.48
RNU6-539P-201ENST00000516665 DCXO43602 365 aa-0.42□□□□□ -2.48
RNU6-539P-201ENST00000516665 ADCY3O60266 1144 aa-0.42□□□□□ -2.48
RNU6-539P-201ENST00000516665 KCNJ13O60928 360 aa-0.42□□□□□ -2.48
RNU6-539P-201ENST00000516665 PPP6R2O75170 966 aa-0.42□□□□□ -2.48
RNU6-539P-201ENST00000516665 DNAJC8O75937 253 aaPredicted RBP-0.42□□□□□ -2.48
RNU6-539P-201ENST00000516665 IGLV1-44P01699 117 aa-0.42□□□□□ -2.48
RNU6-539P-201ENST00000516665 ATP1A1P05023 1023 aaKnown RBP-0.42□□□□□ -2.48
RNU6-539P-201ENST00000516665 HOXC4P09017 264 aaPredicted RBP-0.42□□□□□ -2.48
RNU6-539P-201ENST00000516665 SLC5A2P31639 672 aa-0.42□□□□□ -2.48
RNU6-539P-201ENST00000516665 RASSF2P50749 326 aa-0.42□□□□□ -2.48
RNU6-539P-201ENST00000516665 NDPQ00604 133 aa-0.42□□□□□ -2.48
RNU6-539P-201ENST00000516665 TEFQ10587 303 aa-0.42□□□□□ -2.48
RNU6-539P-201ENST00000516665 MFSD13AQ14CX5 517 aa-0.42□□□□□ -2.48
RNU6-539P-201ENST00000516665 ACCSLQ4AC99 568 aa-0.42□□□□□ -2.48
RNU6-539P-201ENST00000516665 MINDY4Q4G0A6 757 aa-0.42□□□□□ -2.48
RNU6-539P-201ENST00000516665 OTUD1Q5VV17 481 aaPredicted RBP-0.42□□□□□ -2.48
RNU6-539P-201ENST00000516665 ZCCHC12Q6PEW1 402 aa-0.42□□□□□ -2.48
RNU6-539P-201ENST00000516665 PNMA8AQ86V59 439 aaPredicted RBP-0.42□□□□□ -2.48
RNU6-539P-201ENST00000516665 SIRT6Q8N6T7 355 aa-0.42□□□□□ -2.48
RNU6-539P-201ENST00000516665 NPIPB3Q92617 1050 aa-0.42□□□□□ -2.48
RNU6-539P-201ENST00000516665 GPRASP2Q96D09 838 aa-0.42□□□□□ -2.48
RNU6-539P-201ENST00000516665 MAGEB10Q96LZ2 347 aaPredicted RBP-0.42□□□□□ -2.48
RNU6-539P-201ENST00000516665 CDX2Q99626 313 aaPredicted RBP-0.42□□□□□ -2.48
RNU6-539P-201ENST00000516665 GZF1Q9H116 711 aaPredicted RBP-0.42□□□□□ -2.48
RNU6-539P-201ENST00000516665 OXSMQ9NWU1 459 aa-0.42□□□□□ -2.48
RNU6-539P-201ENST00000516665 DDX41Q9UJV9 622 aaKnown RBP-0.42□□□□□ -2.48
RNU6-539P-201ENST00000516665 CDC14AQ9UNH5 594 aa-0.42□□□□□ -2.48
RNU6-539P-201ENST00000516665 SLC8A2Q9UPR5 921 aa-0.42□□□□□ -2.48
RNU6-539P-201ENST00000516665 RAD54BQ9Y620 910 aa-0.42□□□□□ -2.48
RNU6-539P-201ENST00000516665 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa-0.43□□□□□ -2.48
RNU6-539P-201ENST00000516665 KIR2DS1A0A191URI9 304 aa-0.43□□□□□ -2.48
RNU6-539P-201ENST00000516665 UNCXA6NJT0 531 aa-0.43□□□□□ -2.48
RNU6-539P-201ENST00000516665 C16orf96A6NNT2 1141 aa-0.43□□□□□ -2.48
RNU6-539P-201ENST00000516665 PHOX2AO14813 284 aa-0.43□□□□□ -2.48
RNU6-539P-201ENST00000516665 TRIM27P14373 513 aa-0.43□□□□□ -2.48
RNU6-539P-201ENST00000516665 ST6GAL1P15907 406 aa-0.43□□□□□ -2.48
RNU6-539P-201ENST00000516665 CAPN2P17655 700 aa-0.43□□□□□ -2.48
RNU6-539P-201ENST00000516665 PTGER3P43115 390 aa-0.43□□□□□ -2.48
RNU6-539P-201ENST00000516665 CCT2P78371 535 aaKnown RBP-0.43□□□□□ -2.48
RNU6-539P-201ENST00000516665 NSUN2Q08J23 767 aaKnown RBP eCLIP-0.43□□□□□ -2.48
RNU6-539P-201ENST00000516665 HNF4GQ14541 408 aa-0.43□□□□□ -2.48
RNU6-539P-201ENST00000516665 TMEM187Q14656 261 aa-0.43□□□□□ -2.48
RNU6-539P-201ENST00000516665 KIR2DS1Q14954 304 aa-0.43□□□□□ -2.48
RNU6-539P-201ENST00000516665 PFKFB3Q16875 520 aaPredicted RBP-0.43□□□□□ -2.48
RNU6-539P-201ENST00000516665 LY6KQ17RY6 165 aa-0.43□□□□□ -2.48
RNU6-539P-201ENST00000516665 LONRF2Q1L5Z9 754 aa-0.43□□□□□ -2.48
RNU6-539P-201ENST00000516665 WSCD1Q658N2 575 aa-0.43□□□□□ -2.48
RNU6-539P-201ENST00000516665 KRT39Q6A163 491 aa-0.43□□□□□ -2.48
RNU6-539P-201ENST00000516665 LCTLQ6UWM7 567 aa-0.43□□□□□ -2.48
RNU6-539P-201ENST00000516665 RBM44Q6ZP01 1051 aaKnown RBP-0.43□□□□□ -2.48
RNU6-539P-201ENST00000516665 Q6ZSV7 163 aa-0.43□□□□□ -2.48
RNU6-539P-201ENST00000516665 CAND1Q86VP6 1230 aaKnown RBP-0.43□□□□□ -2.48
RNU6-539P-201ENST00000516665 SLC39A11Q8N1S5 342 aa-0.43□□□□□ -2.48
RNU6-539P-201ENST00000516665 IL17RDQ8NFM7 739 aa-0.43□□□□□ -2.48
RNU6-539P-201ENST00000516665 OR14A16Q8NHC5 309 aa-0.43□□□□□ -2.48
RNU6-539P-201ENST00000516665 PIGKQ92643 395 aa-0.43□□□□□ -2.48
RNU6-539P-201ENST00000516665 ZBTB45Q96K62 511 aaPredicted RBP-0.43□□□□□ -2.48
RNU6-539P-201ENST00000516665 LRR1Q96L50 414 aa-0.43□□□□□ -2.48
RNU6-539P-201ENST00000516665 TASP1Q9H6P5 420 aa-0.43□□□□□ -2.48
RNU6-539P-201ENST00000516665 PTPRHQ9HD43 1115 aa-0.43□□□□□ -2.48
RNU6-539P-201ENST00000516665 MYOZ2Q9NPC6 264 aa-0.43□□□□□ -2.48
RNU6-539P-201ENST00000516665 ZDHHC18Q9NUE0 388 aa-0.43□□□□□ -2.48
RNU6-539P-201ENST00000516665 CCM2LQ9NUG4 571 aaPredicted RBP-0.43□□□□□ -2.48
RNU6-539P-201ENST00000516665 CPNE7Q9UBL6 633 aa-0.43□□□□□ -2.48
RNU6-539P-201ENST00000516665 HDAC9Q9UKV0 1011 aa-0.43□□□□□ -2.48
RNU6-539P-201ENST00000516665 MYBBP1AQ9BQG0 1328 aaKnown RBP-0.43□□□□□ -2.48
RNU6-539P-201ENST00000516665 SRCP12931 536 aa-0.44□□□□□ -2.48
RNU6-539P-201ENST00000516665 ZNF280AP59817 542 aaPredicted RBP-0.44□□□□□ -2.48
RNU6-539P-201ENST00000516665 CTXN1P60606 82 aa-0.44□□□□□ -2.48
RNU6-539P-201ENST00000516665 SHHQ15465 462 aa-0.44□□□□□ -2.48
RNU6-539P-201ENST00000516665 CPEB4Q17RY0 729 aaKnown RBP eCLIP-0.44□□□□□ -2.48
RNU6-539P-201ENST00000516665 TAF1BQ53T94 588 aaPredicted RBP-0.44□□□□□ -2.48
RNU6-539P-201ENST00000516665 ARHGAP40Q5TG30 622 aa-0.44□□□□□ -2.48
RNU6-539P-201ENST00000516665 SFRP4Q6FHJ7 346 aaPredicted RBP-0.44□□□□□ -2.48
RNU6-539P-201ENST00000516665 RGS7BPQ6MZT1 257 aaPredicted RBP-0.44□□□□□ -2.48
RNU6-539P-201ENST00000516665 UNQ6126/PRO20091Q6UXV3 157 aa-0.44□□□□□ -2.48
RNU6-539P-201ENST00000516665 SLC16A12Q6ZSM3 486 aa-0.44□□□□□ -2.48
RNU6-539P-201ENST00000516665 OAFQ86UD1 273 aa-0.44□□□□□ -2.48
RNU6-539P-201ENST00000516665 GAS2L3Q86XJ1 694 aa-0.44□□□□□ -2.48
RNU6-539P-201ENST00000516665 LRRC47Q8N1G4 583 aaKnown RBP-0.44□□□□□ -2.48
RNU6-539P-201ENST00000516665 MAML1Q92585 1016 aa-0.44□□□□□ -2.48
RNU6-539P-201ENST00000516665 PACSIN1Q9BY11 444 aa-0.44□□□□□ -2.48
RNU6-539P-201ENST00000516665 KAT14Q9H8E8 782 aa-0.44□□□□□ -2.48
RNU6-539P-201ENST00000516665 ZNF711Q9Y462 761 aa-0.44□□□□□ -2.48
RNU6-539P-201ENST00000516665 MRVI1Q9Y6F6 885 aa-0.44□□□□□ -2.48
RNU6-539P-201ENST00000516665 GAKO14976 1311 aa-0.44□□□□□ -2.48
RNU6-539P-201ENST00000516665 ASTN2O75129 1339 aaPredicted RBP-0.44□□□□□ -2.48
RNU6-539P-201ENST00000516665 IGLV5-37A0A075B6J1 123 aa-0.45□□□□□ -2.48
RNU6-539P-201ENST00000516665 LOC105378220A0A1B0GUY1 285 aaPredicted RBP-0.45□□□□□ -2.48
RNU6-539P-201ENST00000516665 F2RL2O00254 374 aa-0.45□□□□□ -2.48
RNU6-539P-201ENST00000516665 NEMP1O14524 444 aa-0.45□□□□□ -2.48
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms