RNA–Protein interactions for RNA: ENST00000516405.1

RNU6-542P-201, Transcript of RNA, U6 small nuclear 542, pseudogene, humanhuman

BASIC

Gene RNU6-542P, Length 103 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-542P-201ENST00000516405 MAN1B1Q9UKM7 699 aa-0.4□□□□□ -2.47
RNU6-542P-201ENST00000516405 CDC14AQ9UNH5 594 aa-0.4□□□□□ -2.47
RNU6-542P-201ENST00000516405 SPO11Q9Y5K1 396 aa-0.4□□□□□ -2.47
RNU6-542P-201ENST00000516405 GAKO14976 1311 aa-0.4□□□□□ -2.47
RNU6-542P-201ENST00000516405 TCRBV16S1A1N1A0A5B0 115 aa-0.41□□□□□ -2.48
RNU6-542P-201ENST00000516405 UNCXA6NJT0 531 aa-0.41□□□□□ -2.48
RNU6-542P-201ENST00000516405 C16orf96A6NNT2 1141 aa-0.41□□□□□ -2.48
RNU6-542P-201ENST00000516405 NPIPB11E5RHQ5 1161 aa-0.41□□□□□ -2.48
RNU6-542P-201ENST00000516405 GRM6O15303 877 aa-0.41□□□□□ -2.48
RNU6-542P-201ENST00000516405 LRP3O75074 770 aa-0.41□□□□□ -2.48
RNU6-542P-201ENST00000516405 VNN1O95497 513 aa-0.41□□□□□ -2.48
RNU6-542P-201ENST00000516405 ATP1A1P05023 1023 aaKnown RBP-0.41□□□□□ -2.48
RNU6-542P-201ENST00000516405 PRKCBP05771 671 aa-0.41□□□□□ -2.48
RNU6-542P-201ENST00000516405 LPLP06858 475 aa-0.41□□□□□ -2.48
RNU6-542P-201ENST00000516405 TSHRP16473 764 aa-0.41□□□□□ -2.48
RNU6-542P-201ENST00000516405 CAPN2P17655 700 aa-0.41□□□□□ -2.48
RNU6-542P-201ENST00000516405 DDCP20711 480 aa-0.41□□□□□ -2.48
RNU6-542P-201ENST00000516405 RPS6KB1P23443 525 aa-0.41□□□□□ -2.48
RNU6-542P-201ENST00000516405 CD40P25942 277 aa-0.41□□□□□ -2.48
RNU6-542P-201ENST00000516405 SLC5A2P31639 672 aa-0.41□□□□□ -2.48
RNU6-542P-201ENST00000516405 RASSF2P50749 326 aa-0.41□□□□□ -2.48
RNU6-542P-201ENST00000516405 SLC12A2P55011 1212 aa-0.41□□□□□ -2.48
RNU6-542P-201ENST00000516405 MANFP55145 182 aaKnown RBP-0.41□□□□□ -2.48
RNU6-542P-201ENST00000516405 GAD2Q05329 585 aa-0.41□□□□□ -2.48
RNU6-542P-201ENST00000516405 TEFQ10587 303 aa-0.41□□□□□ -2.48
RNU6-542P-201ENST00000516405 KPNB1Q14974 876 aaKnown RBP-0.41□□□□□ -2.48
RNU6-542P-201ENST00000516405 MFSD13AQ14CX5 517 aa-0.41□□□□□ -2.48
RNU6-542P-201ENST00000516405 SEPT2Q15019 361 aa-0.41□□□□□ -2.48
RNU6-542P-201ENST00000516405 SHHQ15465 462 aa-0.41□□□□□ -2.48
RNU6-542P-201ENST00000516405 LONRF2Q1L5Z9 754 aa-0.41□□□□□ -2.48
RNU6-542P-201ENST00000516405 MINDY4Q4G0A6 757 aa-0.41□□□□□ -2.48
RNU6-542P-201ENST00000516405 PLEKHO1Q53GL0 409 aaPredicted RBP-0.41□□□□□ -2.48
RNU6-542P-201ENST00000516405 TAF1BQ53T94 588 aaPredicted RBP-0.41□□□□□ -2.48
RNU6-542P-201ENST00000516405 DNTTIP2Q5QJE6 756 aaKnown RBP-0.41□□□□□ -2.48
RNU6-542P-201ENST00000516405 LDLRAD1Q5T700 205 aa-0.41□□□□□ -2.48
RNU6-542P-201ENST00000516405 WSCD1Q658N2 575 aa-0.41□□□□□ -2.48
RNU6-542P-201ENST00000516405 LCTLQ6UWM7 567 aa-0.41□□□□□ -2.48
RNU6-542P-201ENST00000516405 ZNF365Q70YC5 407 aa-0.41□□□□□ -2.48
RNU6-542P-201ENST00000516405 CHST14Q8NCH0 376 aa-0.41□□□□□ -2.48
RNU6-542P-201ENST00000516405 GSTCDQ8NEC7 633 aa-0.41□□□□□ -2.48
RNU6-542P-201ENST00000516405 IL17RDQ8NFM7 739 aa-0.41□□□□□ -2.48
RNU6-542P-201ENST00000516405 CCHCR1Q8TD31 782 aa-0.41□□□□□ -2.48
RNU6-542P-201ENST00000516405 PHF10Q8WUB8 498 aaKnown RBP-0.41□□□□□ -2.48
RNU6-542P-201ENST00000516405 BICD1Q96G01 975 aa-0.41□□□□□ -2.48
RNU6-542P-201ENST00000516405 FSD1Q9BTV5 496 aa-0.41□□□□□ -2.48
RNU6-542P-201ENST00000516405 DPCDQ9BVM2 203 aaPredicted RBP-0.41□□□□□ -2.48
RNU6-542P-201ENST00000516405 MS4A5Q9H3V2 200 aa-0.41□□□□□ -2.48
RNU6-542P-201ENST00000516405 PIF1Q9H611 641 aa-0.41□□□□□ -2.48
RNU6-542P-201ENST00000516405 KAT14Q9H8E8 782 aa-0.41□□□□□ -2.48
RNU6-542P-201ENST00000516405 IFT122Q9HBG6 1241 aa-0.41□□□□□ -2.48
RNU6-542P-201ENST00000516405 H2AFY2Q9P0M6 372 aaPredicted RBP-0.41□□□□□ -2.48
RNU6-542P-201ENST00000516405 SCOCQ9UIL1 159 aa-0.41□□□□□ -2.48
RNU6-542P-201ENST00000516405 ZNF711Q9Y462 761 aa-0.41□□□□□ -2.48
RNU6-542P-201ENST00000516405 RAD54BQ9Y620 910 aa-0.41□□□□□ -2.48
RNU6-542P-201ENST00000516405 KIF25-AS1Q9Y6Z4 181 aa-0.41□□□□□ -2.48
RNU6-542P-201ENST00000516405 ZFHX2Q9C0A1 2572 aaPredicted RBP-0.41□□□□□ -2.48
RNU6-542P-201ENST00000516405 MACF1Q9UPN3 7388 aaKnown RBP-0.41□□□□□ -2.48
RNU6-542P-201ENST00000516405 ASTN2O75129 1339 aaPredicted RBP-0.41□□□□□ -2.48
RNU6-542P-201ENST00000516405 KIAA1210Q9ULL0 1709 aa-0.41□□□□□ -2.48
RNU6-542P-201ENST00000516405 TRBV23-1A0A0A0MS06 115 aa-0.42□□□□□ -2.48
RNU6-542P-201ENST00000516405 KCNJ13O60928 360 aa-0.42□□□□□ -2.48
RNU6-542P-201ENST00000516405 DNAJC8O75937 253 aaPredicted RBP-0.42□□□□□ -2.48
RNU6-542P-201ENST00000516405 GLRX3O76003 335 aaKnown RBP-0.42□□□□□ -2.48
RNU6-542P-201ENST00000516405 SRCP12931 536 aa-0.42□□□□□ -2.48
RNU6-542P-201ENST00000516405 SUMO1P63165 101 aaKnown RBP-0.42□□□□□ -2.48
RNU6-542P-201ENST00000516405 NSUN2Q08J23 767 aaKnown RBP eCLIP-0.42□□□□□ -2.48
RNU6-542P-201ENST00000516405 LRRC32Q14392 662 aa-0.42□□□□□ -2.48
RNU6-542P-201ENST00000516405 HNF4GQ14541 408 aa-0.42□□□□□ -2.48
RNU6-542P-201ENST00000516405 FXNQ16595 210 aa-0.42□□□□□ -2.48
RNU6-542P-201ENST00000516405 PFKFB3Q16875 520 aaPredicted RBP-0.42□□□□□ -2.48
RNU6-542P-201ENST00000516405 CPEB4Q17RY0 729 aaKnown RBP eCLIP-0.42□□□□□ -2.48
RNU6-542P-201ENST00000516405 LY6KQ17RY6 165 aa-0.42□□□□□ -2.48
RNU6-542P-201ENST00000516405 SPDYCQ5MJ68 293 aa-0.42□□□□□ -2.48
RNU6-542P-201ENST00000516405 OTUD1Q5VV17 481 aaPredicted RBP-0.42□□□□□ -2.48
RNU6-542P-201ENST00000516405 SFRP4Q6FHJ7 346 aaPredicted RBP-0.42□□□□□ -2.48
RNU6-542P-201ENST00000516405 UNQ6126/PRO20091Q6UXV3 157 aa-0.42□□□□□ -2.48
RNU6-542P-201ENST00000516405 RBM44Q6ZP01 1051 aaKnown RBP-0.42□□□□□ -2.48
RNU6-542P-201ENST00000516405 Q6ZSV7 163 aa-0.42□□□□□ -2.48
RNU6-542P-201ENST00000516405 PNMA8AQ86V59 439 aaPredicted RBP-0.42□□□□□ -2.48
RNU6-542P-201ENST00000516405 CAND1Q86VP6 1230 aaKnown RBP-0.42□□□□□ -2.48
RNU6-542P-201ENST00000516405 GAS2L3Q86XJ1 694 aa-0.42□□□□□ -2.48
RNU6-542P-201ENST00000516405 SIRT6Q8N6T7 355 aa-0.42□□□□□ -2.48
RNU6-542P-201ENST00000516405 ZNF114Q8NC26 417 aa-0.42□□□□□ -2.48
RNU6-542P-201ENST00000516405 HERVK_113Q902F9 699 aa-0.42□□□□□ -2.48
RNU6-542P-201ENST00000516405 MAML1Q92585 1016 aa-0.42□□□□□ -2.48
RNU6-542P-201ENST00000516405 NPIPB3Q92617 1050 aa-0.42□□□□□ -2.48
RNU6-542P-201ENST00000516405 ST6GALNAC6Q969X2 333 aa-0.42□□□□□ -2.48
RNU6-542P-201ENST00000516405 PAWRQ96IZ0 340 aaKnown RBP-0.42□□□□□ -2.48
RNU6-542P-201ENST00000516405 LRR1Q96L50 414 aa-0.42□□□□□ -2.48
RNU6-542P-201ENST00000516405 SPATA32Q96LK8 384 aa-0.42□□□□□ -2.48
RNU6-542P-201ENST00000516405 HS6ST2Q96MM7 605 aa-0.42□□□□□ -2.48
RNU6-542P-201ENST00000516405 BARD1Q99728 777 aaKnown RBP-0.42□□□□□ -2.48
RNU6-542P-201ENST00000516405 PKP2Q99959 881 aa-0.42□□□□□ -2.48
RNU6-542P-201ENST00000516405 SYT11Q9BT88 431 aa-0.42□□□□□ -2.48
RNU6-542P-201ENST00000516405 SORBS1Q9BX66 1292 aaKnown RBP-0.42□□□□□ -2.48
RNU6-542P-201ENST00000516405 KCTD10Q9H3F6 313 aa-0.42□□□□□ -2.48
RNU6-542P-201ENST00000516405 ASIC3Q9UHC3 531 aa-0.42□□□□□ -2.48
RNU6-542P-201ENST00000516405 RASAL2Q9UJF2 1139 aa-0.42□□□□□ -2.48
RNU6-542P-201ENST00000516405 HDAC9Q9UKV0 1011 aa-0.42□□□□□ -2.48
RNU6-542P-201ENST00000516405 SLC8A2Q9UPR5 921 aa-0.42□□□□□ -2.48
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms