RNA–Protein interactions for RNA: ENST00000515572.5

SNF8-215, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 687 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-215ENST00000515572 PLEKHA7Q6IQ23 1121 aa12.39□□□□□ -0.43
SNF8-215ENST00000515572 SND1Q7KZF4 910 aaKnown RBP eCLIP12.39□□□□□ -0.43
SNF8-215ENST00000515572 RALGPS2Q86X27 583 aaPredicted RBP12.39□□□□□ -0.43
SNF8-215ENST00000515572 BBS7Q8IWZ6 715 aa12.39□□□□□ -0.43
SNF8-215ENST00000515572 ADGRG2Q8IZP9 1017 aa12.39□□□□□ -0.43
SNF8-215ENST00000515572 ADAM32Q8TC27 787 aa12.39□□□□□ -0.43
SNF8-215ENST00000515572 WBP2Q969T9 261 aa12.39□□□□□ -0.43
SNF8-215ENST00000515572 EXOC4Q96A65 974 aa12.39□□□□□ -0.43
SNF8-215ENST00000515572 AZIN2Q96A70 460 aa12.39□□□□□ -0.43
SNF8-215ENST00000515572 ZNF653Q96CK0 615 aa12.39□□□□□ -0.43
SNF8-215ENST00000515572 PGAP3Q96FM1 320 aaPredicted RBP12.39□□□□□ -0.43
SNF8-215ENST00000515572 SLC39A13Q96H72 371 aa12.39□□□□□ -0.43
SNF8-215ENST00000515572 FCRL2Q96LA5 508 aaPredicted RBP12.39□□□□□ -0.43
SNF8-215ENST00000515572 LINC00597Q9H2U6 94 aa12.39□□□□□ -0.43
SNF8-215ENST00000515572 C8orf33Q9H7E9 229 aaPredicted RBP12.39□□□□□ -0.43
SNF8-215ENST00000515572 ECT2Q9H8V3 914 aa12.39□□□□□ -0.43
SNF8-215ENST00000515572 HPS4Q9NQG7 708 aa12.39□□□□□ -0.43
SNF8-215ENST00000515572 ARHGEF3Q9NR81 526 aa12.39□□□□□ -0.43
SNF8-215ENST00000515572 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.39□□□□□ -0.43
SNF8-215ENST00000515572 DDIT4Q9NX09 232 aa12.39□□□□□ -0.43
SNF8-215ENST00000515572 CNOT8Q9UFF9 292 aaKnown RBP12.39□□□□□ -0.43
SNF8-215ENST00000515572 AGO1Q9UL18 857 aaKnown RBP12.39□□□□□ -0.43
SNF8-215ENST00000515572 NENFQ9UMX5 172 aa12.39□□□□□ -0.43
SNF8-215ENST00000515572 SCINQ9Y6U3 715 aa12.39□□□□□ -0.43
SNF8-215ENST00000515572 TTC28Q96AY4 2481 aa12.38□□□□□ -0.43
SNF8-215ENST00000515572 C2CD4BA6NLJ0 364 aa12.38□□□□□ -0.43
SNF8-215ENST00000515572 MAN2B1O00754 1011 aa12.38□□□□□ -0.43
SNF8-215ENST00000515572 ARSAP15289 507 aa12.38□□□□□ -0.43
SNF8-215ENST00000515572 PDGFRAP16234 1089 aa12.38□□□□□ -0.43
SNF8-215ENST00000515572 GPD1P21695 349 aa12.38□□□□□ -0.43
SNF8-215ENST00000515572 FECHP22830 423 aa12.38□□□□□ -0.43
SNF8-215ENST00000515572 CCR1P32246 355 aa12.38□□□□□ -0.43
SNF8-215ENST00000515572 RFC1P35251 1148 aaPredicted RBP12.38□□□□□ -0.43
SNF8-215ENST00000515572 PTPN9P43378 593 aa12.38□□□□□ -0.43
SNF8-215ENST00000515572 SULT1E1P49888 294 aa12.38□□□□□ -0.43
SNF8-215ENST00000515572 MRE11P49959 708 aa12.38□□□□□ -0.43
SNF8-215ENST00000515572 GSDMDP57764 484 aa12.38□□□□□ -0.43
SNF8-215ENST00000515572 PITX1P78337 314 aaPredicted RBP12.38□□□□□ -0.43
SNF8-215ENST00000515572 DEUP1Q05D60 604 aa12.38□□□□□ -0.43
SNF8-215ENST00000515572 GFPT1Q06210 699 aaPredicted RBP12.38□□□□□ -0.43
SNF8-215ENST00000515572 TNK2Q07912 1038 aa12.38□□□□□ -0.43
SNF8-215ENST00000515572 NME3Q13232 169 aa12.38□□□□□ -0.43
SNF8-215ENST00000515572 MAMLD1Q13495 774 aa12.38□□□□□ -0.43
SNF8-215ENST00000515572 PPP2R5DQ14738 602 aa12.38□□□□□ -0.43
SNF8-215ENST00000515572 BRMS1LQ5PSV4 323 aa12.38□□□□□ -0.43
SNF8-215ENST00000515572 C10orf76Q5T2E6 689 aa12.38□□□□□ -0.43
SNF8-215ENST00000515572 ADGRF1Q5T601 910 aa12.38□□□□□ -0.43
SNF8-215ENST00000515572 TRNP1Q6NT89 227 aa12.38□□□□□ -0.43
SNF8-215ENST00000515572 DCUN1D2Q6PH85 259 aa12.38□□□□□ -0.43
SNF8-215ENST00000515572 PHLDB2Q86SQ0 1253 aa12.38□□□□□ -0.43
SNF8-215ENST00000515572 TMTC1Q8IUR5 882 aa12.38□□□□□ -0.43
SNF8-215ENST00000515572 DENND1CQ8IV53 801 aa12.38□□□□□ -0.43
SNF8-215ENST00000515572 FAM217AQ8IXS0 508 aa12.38□□□□□ -0.43
SNF8-215ENST00000515572 CCDC170Q8IYT3 715 aa12.38□□□□□ -0.43
SNF8-215ENST00000515572 CPXM2Q8N436 756 aa12.38□□□□□ -0.43
SNF8-215ENST00000515572 EMC1Q8N766 993 aa12.38□□□□□ -0.43
SNF8-215ENST00000515572 SPC24Q8NBT2 197 aa12.38□□□□□ -0.43
SNF8-215ENST00000515572 RXFP2Q8WXD0 754 aa12.38□□□□□ -0.43
SNF8-215ENST00000515572 DDX50Q9BQ39 737 aaKnown RBP12.38□□□□□ -0.43
SNF8-215ENST00000515572 IRX2Q9BZI1 471 aaPredicted RBP12.38□□□□□ -0.43
SNF8-215ENST00000515572 HEBP1Q9NRV9 189 aa12.38□□□□□ -0.43
SNF8-215ENST00000515572 GTSE1Q9NYZ3 720 aa12.38□□□□□ -0.43
SNF8-215ENST00000515572 SLC12A6Q9UHW9 1150 aa12.38□□□□□ -0.43
SNF8-215ENST00000515572 STOML2Q9UJZ1 356 aa12.38□□□□□ -0.43
SNF8-215ENST00000515572 PIAS3Q9Y6X2 628 aa12.38□□□□□ -0.43
SNF8-215ENST00000515572 COL4A3Q01955 1670 aa12.38□□□□□ -0.43
SNF8-215ENST00000515572 KIAA1549LQ6ZVL6 1849 aa12.37□□□□□ -0.43
SNF8-215ENST00000515572 MIA3Q5JRA6 1907 aa12.37□□□□□ -0.43
SNF8-215ENST00000515572 TMEM221A6NGB7 291 aa12.37□□□□□ -0.43
SNF8-215ENST00000515572 SPECC1L-ADORA2AF8WAN1 911 aa12.37□□□□□ -0.43
SNF8-215ENST00000515572 M0R296 226 aa12.37□□□□□ -0.43
SNF8-215ENST00000515572 SCAMP3O14828 347 aaKnown RBP12.37□□□□□ -0.43
SNF8-215ENST00000515572 CYP17A1P05093 508 aa12.37□□□□□ -0.43
SNF8-215ENST00000515572 ABCB4P21439 1286 aa12.37□□□□□ -0.43
SNF8-215ENST00000515572 RDXP35241 583 aaKnown RBP12.37□□□□□ -0.43
SNF8-215ENST00000515572 ZNF143P52747 638 aaPredicted RBP12.37□□□□□ -0.43
SNF8-215ENST00000515572 STARD6P59095 220 aa12.37□□□□□ -0.43
SNF8-215ENST00000515572 GAD2Q05329 585 aa12.37□□□□□ -0.43
SNF8-215ENST00000515572 DHCR24Q15392 516 aa12.37□□□□□ -0.43
SNF8-215ENST00000515572 ACBD5Q5T8D3 534 aaPredicted RBP12.37□□□□□ -0.43
SNF8-215ENST00000515572 ZNF852Q6ZMS4 543 aa12.37□□□□□ -0.43
SNF8-215ENST00000515572 TPRG1Q6ZUI0 275 aa12.37□□□□□ -0.43
SNF8-215ENST00000515572 STRADAQ7RTN6 431 aa12.37□□□□□ -0.43
SNF8-215ENST00000515572 BNIPLQ7Z465 357 aa12.37□□□□□ -0.43
SNF8-215ENST00000515572 SIX5Q8N196 739 aa12.37□□□□□ -0.43
SNF8-215ENST00000515572 ATP6V0D2Q8N8Y2 350 aa12.37□□□□□ -0.43
SNF8-215ENST00000515572 JOSD2Q8TAC2 188 aa12.37□□□□□ -0.43
SNF8-215ENST00000515572 FNIP1Q8TF40 1166 aa12.37□□□□□ -0.43
SNF8-215ENST00000515572 RNF34Q969K3 372 aa12.37□□□□□ -0.43
SNF8-215ENST00000515572 BTN2A3PQ96KV6 586 aa12.37□□□□□ -0.43
SNF8-215ENST00000515572 CFAP57Q96MR6 1250 aa12.37□□□□□ -0.43
SNF8-215ENST00000515572 MCEEQ96PE7 176 aa12.37□□□□□ -0.43
SNF8-215ENST00000515572 TBCBQ99426 244 aa12.37□□□□□ -0.43
SNF8-215ENST00000515572 CNPY3Q9BT09 278 aa12.37□□□□□ -0.43
SNF8-215ENST00000515572 THAP2Q9H0W7 228 aa12.37□□□□□ -0.43
SNF8-215ENST00000515572 WDCPQ9H6R7 721 aa12.37□□□□□ -0.43
SNF8-215ENST00000515572 SPHK2Q9NRA0 654 aa12.37□□□□□ -0.43
SNF8-215ENST00000515572 MARK1Q9P0L2 795 aa12.37□□□□□ -0.43
SNF8-215ENST00000515572 MYO1AQ9UBC5 1043 aa12.37□□□□□ -0.43
SNF8-215ENST00000515572 CA14Q9ULX7 337 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms