RNA–Protein interactions for RNA: ENST00000515459.5

LMNA-223, Transcript of lamin A/C, humanhuman

TSL 5

Gene LMNA, Length 757 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-223ENST00000515459 CLIC5Q9NZA1 410 aa16.55■□□□□ 0.24
LMNA-223ENST00000515459 FNDC3AQ9Y2H6 1198 aaKnown RBP16.55■□□□□ 0.24
LMNA-223ENST00000515459 RAXQ9Y2V3 346 aa16.55■□□□□ 0.24
LMNA-223ENST00000515459 PCDHGB2Q9Y5G2 931 aa16.55■□□□□ 0.24
LMNA-223ENST00000515459 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.54■□□□□ 0.24
LMNA-223ENST00000515459 PIK3CAP42336 1068 aa16.54■□□□□ 0.24
LMNA-223ENST00000515459 AFMP43652 599 aa16.54■□□□□ 0.24
LMNA-223ENST00000515459 COPAP53621 1224 aa16.54■□□□□ 0.24
LMNA-223ENST00000515459 BNC1Q01954 994 aa16.54■□□□□ 0.24
LMNA-223ENST00000515459 INCA1Q0VD86 236 aa16.54■□□□□ 0.24
LMNA-223ENST00000515459 CUL4BQ13620 913 aa16.54■□□□□ 0.24
LMNA-223ENST00000515459 ZNF234Q14588 700 aa16.54■□□□□ 0.24
LMNA-223ENST00000515459 SUZ12Q15022 739 aaKnown RBP16.54■□□□□ 0.24
LMNA-223ENST00000515459 EIF4HQ15056 248 aaKnown RBP16.54■□□□□ 0.24
LMNA-223ENST00000515459 SCD5Q86SK9 330 aa16.54■□□□□ 0.24
LMNA-223ENST00000515459 SLC9A9Q8IVB4 645 aa16.54■□□□□ 0.24
LMNA-223ENST00000515459 TMC2Q8TDI7 906 aa16.54■□□□□ 0.24
LMNA-223ENST00000515459 RHBDD1Q8TEB9 315 aa16.54■□□□□ 0.24
LMNA-223ENST00000515459 TMEM174Q8WUU8 243 aa16.54■□□□□ 0.24
LMNA-223ENST00000515459 PIWIL1Q96J94 861 aaKnown RBP16.54■□□□□ 0.24
LMNA-223ENST00000515459 TWNKQ96RR1 684 aa16.54■□□□□ 0.24
LMNA-223ENST00000515459 PCED1AQ9H1Q7 454 aa16.54■□□□□ 0.24
LMNA-223ENST00000515459 ELOVL2Q9NXB9 296 aa16.54■□□□□ 0.24
LMNA-223ENST00000515459 TOR4AQ9NXH8 423 aa16.54■□□□□ 0.24
LMNA-223ENST00000515459 DKK4Q9UBT3 224 aa16.54■□□□□ 0.24
LMNA-223ENST00000515459 TMEM131Q92545 1883 aa16.53■□□□□ 0.24
LMNA-223ENST00000515459 IKBKBO14920 756 aa16.53■□□□□ 0.24
LMNA-223ENST00000515459 YEATS4O95619 227 aa16.53■□□□□ 0.24
LMNA-223ENST00000515459 HLA-DRAP01903 254 aa16.53■□□□□ 0.24
LMNA-223ENST00000515459 CYBBP04839 570 aa16.53■□□□□ 0.24
LMNA-223ENST00000515459 EPHX1P07099 455 aa16.53■□□□□ 0.24
LMNA-223ENST00000515459 ATXN1LP0C7T5 689 aaKnown RBP16.53■□□□□ 0.24
LMNA-223ENST00000515459 CORO1AP31146 461 aaKnown RBP16.53■□□□□ 0.24
LMNA-223ENST00000515459 EFEMP1Q12805 493 aa16.53■□□□□ 0.24
LMNA-223ENST00000515459 SERPINA13PQ6UXR4 307 aa16.53■□□□□ 0.24
LMNA-223ENST00000515459 CACUL1Q86Y37 369 aa16.53■□□□□ 0.24
LMNA-223ENST00000515459 C1orf216Q8TAB5 229 aa16.53■□□□□ 0.24
LMNA-223ENST00000515459 BACH2Q9BYV9 841 aa16.53■□□□□ 0.24
LMNA-223ENST00000515459 IMPG2Q9BZV3 1241 aa16.53■□□□□ 0.24
LMNA-223ENST00000515459 CIPCQ9C0C6 399 aa16.53■□□□□ 0.24
LMNA-223ENST00000515459 DNAI2Q9GZS0 605 aa16.53■□□□□ 0.24
LMNA-223ENST00000515459 SCUBE2Q9NQ36 999 aa16.53■□□□□ 0.24
LMNA-223ENST00000515459 RASAL2Q9UJF2 1139 aa16.53■□□□□ 0.24
LMNA-223ENST00000515459 USP3Q9Y6I4 520 aa16.53■□□□□ 0.24
LMNA-223ENST00000515459 ACACAQ13085 2346 aa16.53■□□□□ 0.24
LMNA-223ENST00000515459 A0A1B0GVT2 93 aa16.52■□□□□ 0.24
LMNA-223ENST00000515459 TIMM44O43615 452 aa16.52■□□□□ 0.24
LMNA-223ENST00000515459 DKK1O94907 266 aa16.52■□□□□ 0.24
LMNA-223ENST00000515459 KIF20AO95235 890 aa16.52■□□□□ 0.24
LMNA-223ENST00000515459 HMBSP08397 361 aa16.52■□□□□ 0.24
LMNA-223ENST00000515459 PRKCHP24723 683 aa16.52■□□□□ 0.24
LMNA-223ENST00000515459 CSNK1EP49674 416 aaKnown RBP16.52■□□□□ 0.24
LMNA-223ENST00000515459 AFF3P51826 1226 aaKnown RBP16.52■□□□□ 0.24
LMNA-223ENST00000515459 ARID5AQ03989 594 aa16.52■□□□□ 0.24
LMNA-223ENST00000515459 STK4Q13043 487 aa16.52■□□□□ 0.24
LMNA-223ENST00000515459 FAM124AQ86V42 546 aa16.52■□□□□ 0.24
LMNA-223ENST00000515459 DENND1CQ8IV53 801 aa16.52■□□□□ 0.24
LMNA-223ENST00000515459 GALNT15Q8N3T1 639 aa16.52■□□□□ 0.24
LMNA-223ENST00000515459 SNX19Q92543 992 aa16.52■□□□□ 0.24
LMNA-223ENST00000515459 DUSP16Q9BY84 665 aa16.52■□□□□ 0.24
LMNA-223ENST00000515459 SLC2A11Q9BYW1 496 aa16.52■□□□□ 0.24
LMNA-223ENST00000515459 CYP3A43Q9HB55 503 aa16.52■□□□□ 0.24
LMNA-223ENST00000515459 FOXD4L1Q9NU39 408 aa16.52■□□□□ 0.24
LMNA-223ENST00000515459 FAM13BQ9NYF5 915 aa16.52■□□□□ 0.24
LMNA-223ENST00000515459 AGO1Q9UL18 857 aaKnown RBP16.52■□□□□ 0.24
LMNA-223ENST00000515459 PDXKO00764 312 aa16.51■□□□□ 0.23
LMNA-223ENST00000515459 NR3C1P04150 777 aa16.51■□□□□ 0.23
LMNA-223ENST00000515459 CEP135Q66GS9 1140 aa16.51■□□□□ 0.23
LMNA-223ENST00000515459 CPXM2Q8N436 756 aa16.51■□□□□ 0.23
LMNA-223ENST00000515459 RBBP8NLQ8NC74 664 aaPredicted RBP16.51■□□□□ 0.23
LMNA-223ENST00000515459 KIAA0895Q8NCT3 520 aa16.51■□□□□ 0.23
LMNA-223ENST00000515459 DDI1Q8WTU0 396 aa16.51■□□□□ 0.23
LMNA-223ENST00000515459 SORCS1Q8WY21 1168 aa16.51■□□□□ 0.23
LMNA-223ENST00000515459 LRIG1Q96JA1 1093 aa16.51■□□□□ 0.23
LMNA-223ENST00000515459 KCTD10Q9H3F6 313 aa16.51■□□□□ 0.23
LMNA-223ENST00000515459 CLEC4EQ9ULY5 219 aa16.51■□□□□ 0.23
LMNA-223ENST00000515459 FRMD4BQ9Y2L6 1034 aa16.51■□□□□ 0.23
LMNA-223ENST00000515459 APC2O95996 2303 aa16.51■□□□□ 0.23
LMNA-223ENST00000515459 GOLGA8CPA6NN73 597 aa16.5■□□□□ 0.23
LMNA-223ENST00000515459 CD58P19256 250 aa16.5■□□□□ 0.23
LMNA-223ENST00000515459 TEAD4Q15561 434 aa16.5■□□□□ 0.23
LMNA-223ENST00000515459 KIF19Q2TAC6 998 aa16.5■□□□□ 0.23
LMNA-223ENST00000515459 C1orf220Q5T0J3 134 aa16.5■□□□□ 0.23
LMNA-223ENST00000515459 PPP1R26Q5T8A7 1209 aaPredicted RBP16.5■□□□□ 0.23
LMNA-223ENST00000515459 TMEM215Q68D42 235 aa16.5■□□□□ 0.23
LMNA-223ENST00000515459 RSRC2Q7L4I2 434 aaKnown RBP16.5■□□□□ 0.23
LMNA-223ENST00000515459 GRAMD1CQ8IYS0 662 aa16.5■□□□□ 0.23
LMNA-223ENST00000515459 CEP57L1Q8IYX8 460 aa16.5■□□□□ 0.23
LMNA-223ENST00000515459 ARHGAP18Q8N392 663 aa16.5■□□□□ 0.23
LMNA-223ENST00000515459 OR2T3Q8NH03 318 aa16.5■□□□□ 0.23
LMNA-223ENST00000515459 NIF3L1Q9GZT8 377 aa16.5■□□□□ 0.23
LMNA-223ENST00000515459 LHX5Q9H2C1 402 aa16.5■□□□□ 0.23
LMNA-223ENST00000515459 C6orf106Q9H6K1 298 aaPredicted RBP16.5■□□□□ 0.23
LMNA-223ENST00000515459 EXOC1Q9NV70 894 aa16.5■□□□□ 0.23
LMNA-223ENST00000515459 MARCH2Q9P0N8 246 aa16.5■□□□□ 0.23
LMNA-223ENST00000515459 STRIP2Q9ULQ0 834 aa16.5■□□□□ 0.23
LMNA-223ENST00000515459 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.5■□□□□ 0.23
LMNA-223ENST00000515459 BTBD3Q9Y2F9 522 aa16.5■□□□□ 0.23
LMNA-223ENST00000515459 IGSF10Q6WRI0 2623 aa16.5■□□□□ 0.23
LMNA-223ENST00000515459 TRABD2BA6NFA1 517 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms