RNA–Protein interactions for RNA: ENST00000514110.5

SNHG4-208, Transcript of small nucleolar RNA host gene 4, humanhuman

TSL 1 (best)

Gene SNHG4, Length 679 nt, Biotype retained intron, Subcellular localisation Nucleoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG4-208ENST00000514110 FMR1NBQ8N0W7 255 aaPredicted RBP12.79□□□□□ -0.36
SNHG4-208ENST00000514110 TRIML1Q8N9V2 468 aa12.79□□□□□ -0.36
SNHG4-208ENST00000514110 OR2I1PQ8NGU4 316 aa12.79□□□□□ -0.36
SNHG4-208ENST00000514110 CEP76Q8TAP6 659 aa12.79□□□□□ -0.36
SNHG4-208ENST00000514110 ERCC4Q92889 916 aaPredicted RBP12.79□□□□□ -0.36
SNHG4-208ENST00000514110 GTPBP2Q9BX10 602 aaKnown RBP12.79□□□□□ -0.36
SNHG4-208ENST00000514110 ULBP1Q9BZM6 244 aa12.79□□□□□ -0.36
SNHG4-208ENST00000514110 FAM124BQ9H5Z6 455 aaPredicted RBP12.79□□□□□ -0.36
SNHG4-208ENST00000514110 THAP10Q9P2Z0 257 aaPredicted RBP12.79□□□□□ -0.36
SNHG4-208ENST00000514110 TSPAN16Q9UKR8 245 aa12.79□□□□□ -0.36
SNHG4-208ENST00000514110 TRIM49BA6NDI0 452 aa12.78□□□□□ -0.36
SNHG4-208ENST00000514110 C1QTNF9BB2RNN3 333 aa12.78□□□□□ -0.36
SNHG4-208ENST00000514110 XPO1O14980 1071 aaKnown RBP12.78□□□□□ -0.36
SNHG4-208ENST00000514110 SLC16A3O15427 465 aaKnown RBP12.78□□□□□ -0.36
SNHG4-208ENST00000514110 C1QTNF9P0C862 333 aa12.78□□□□□ -0.36
SNHG4-208ENST00000514110 ATXN3P54252 364 aaPredicted RBP12.78□□□□□ -0.36
SNHG4-208ENST00000514110 BCAT1P54687 386 aa12.78□□□□□ -0.36
SNHG4-208ENST00000514110 SLC8A3P57103 927 aa12.78□□□□□ -0.36
SNHG4-208ENST00000514110 FKBP3Q00688 224 aaKnown RBP12.78□□□□□ -0.36
SNHG4-208ENST00000514110 ENPP2Q13822 863 aa12.78□□□□□ -0.36
SNHG4-208ENST00000514110 SGO2Q562F6 1265 aa12.78□□□□□ -0.36
SNHG4-208ENST00000514110 ANKS1BQ7Z6G8 1248 aa12.78□□□□□ -0.36
SNHG4-208ENST00000514110 FMNL3Q8IVF7 1028 aa12.78□□□□□ -0.36
SNHG4-208ENST00000514110 FAM217AQ8IXS0 508 aa12.78□□□□□ -0.36
SNHG4-208ENST00000514110 CPXM2Q8N436 756 aa12.78□□□□□ -0.36
SNHG4-208ENST00000514110 UBR7Q8N806 425 aa12.78□□□□□ -0.36
SNHG4-208ENST00000514110 RBBP8NLQ8NC74 664 aaPredicted RBP12.78□□□□□ -0.36
SNHG4-208ENST00000514110 UBA3Q8TBC4 463 aa12.78□□□□□ -0.36
SNHG4-208ENST00000514110 ZNF419Q96HQ0 510 aaPredicted RBP12.78□□□□□ -0.36
SNHG4-208ENST00000514110 TSG101Q99816 390 aa12.78□□□□□ -0.36
SNHG4-208ENST00000514110 MKRN2Q9H000 416 aaKnown RBP12.78□□□□□ -0.36
SNHG4-208ENST00000514110 PRDM16Q9HAZ2 1276 aa12.78□□□□□ -0.36
SNHG4-208ENST00000514110 RMND1Q9NWS8 449 aa12.78□□□□□ -0.36
SNHG4-208ENST00000514110 STRIP2Q9ULQ0 834 aa12.78□□□□□ -0.36
SNHG4-208ENST00000514110 PI4KAP42356 2102 aa12.77□□□□□ -0.36
SNHG4-208ENST00000514110 ASCC3Q8N3C0 2202 aaKnown RBP12.77□□□□□ -0.36
SNHG4-208ENST00000514110 UPK3BL1B0FP48 263 aa12.77□□□□□ -0.37
SNHG4-208ENST00000514110 KCNJ18B7U540 433 aa12.77□□□□□ -0.37
SNHG4-208ENST00000514110 UPK3BL2E5RIL1 263 aa12.77□□□□□ -0.37
SNHG4-208ENST00000514110 ARHGAP33O14559 1287 aa12.77□□□□□ -0.37
SNHG4-208ENST00000514110 NDUFS2O75306 463 aa12.77□□□□□ -0.37
SNHG4-208ENST00000514110 CYBBP04839 570 aa12.77□□□□□ -0.37
SNHG4-208ENST00000514110 PROS1P07225 676 aa12.77□□□□□ -0.37
SNHG4-208ENST00000514110 CD19P15391 556 aa12.77□□□□□ -0.37
SNHG4-208ENST00000514110 PRKCHP24723 683 aa12.77□□□□□ -0.37
SNHG4-208ENST00000514110 MAOBP27338 520 aa12.77□□□□□ -0.37
SNHG4-208ENST00000514110 CD6P30203 668 aa12.77□□□□□ -0.37
SNHG4-208ENST00000514110 ADIGQ0VDE8 80 aa12.77□□□□□ -0.37
SNHG4-208ENST00000514110 BST2Q10589 180 aaKnown RBP12.77□□□□□ -0.37
SNHG4-208ENST00000514110 LRMPQ12912 555 aa12.77□□□□□ -0.37
SNHG4-208ENST00000514110 ZNF234Q14588 700 aa12.77□□□□□ -0.37
SNHG4-208ENST00000514110 STARD3Q14849 445 aa12.77□□□□□ -0.37
SNHG4-208ENST00000514110 TRIP4Q15650 581 aaPredicted RBP12.77□□□□□ -0.37
SNHG4-208ENST00000514110 TMEM215Q68D42 235 aa12.77□□□□□ -0.37
SNHG4-208ENST00000514110 UNQ6494/PRO21346Q6UXR6 183 aa12.77□□□□□ -0.37
SNHG4-208ENST00000514110 RABEPKQ7Z6M1 372 aa12.77□□□□□ -0.37
SNHG4-208ENST00000514110 METTL3Q86U44 580 aaKnown RBP12.77□□□□□ -0.37
SNHG4-208ENST00000514110 RGL4Q8IZJ4 473 aa12.77□□□□□ -0.37
SNHG4-208ENST00000514110 HDDC3Q8N4P3 179 aa12.77□□□□□ -0.37
SNHG4-208ENST00000514110 MINDY1Q8N5J2 469 aa12.77□□□□□ -0.37
SNHG4-208ENST00000514110 ENGASEQ8NFI3 743 aa12.77□□□□□ -0.37
SNHG4-208ENST00000514110 SPATA20Q8TB22 786 aa12.77□□□□□ -0.37
SNHG4-208ENST00000514110 DDI1Q8WTU0 396 aa12.77□□□□□ -0.37
SNHG4-208ENST00000514110 SORCS1Q8WY21 1168 aa12.77□□□□□ -0.37
SNHG4-208ENST00000514110 EDEM1Q92611 657 aa12.77□□□□□ -0.37
SNHG4-208ENST00000514110 SLC35C1Q96A29 364 aa12.77□□□□□ -0.37
SNHG4-208ENST00000514110 PLD4Q96BZ4 506 aa12.77□□□□□ -0.37
SNHG4-208ENST00000514110 CCDC34Q96HJ3 373 aa12.77□□□□□ -0.37
SNHG4-208ENST00000514110 GSDMAQ96QA5 445 aa12.77□□□□□ -0.37
SNHG4-208ENST00000514110 TMEM121BQ9BXQ6 578 aaPredicted RBP12.77□□□□□ -0.37
SNHG4-208ENST00000514110 SLC32A1Q9H598 525 aa12.77□□□□□ -0.37
SNHG4-208ENST00000514110 ELOVL2Q9NXB9 296 aa12.77□□□□□ -0.37
SNHG4-208ENST00000514110 WSB2Q9NYS7 404 aaPredicted RBP12.77□□□□□ -0.37
SNHG4-208ENST00000514110 USP36Q9P275 1121 aaKnown RBP12.77□□□□□ -0.37
SNHG4-208ENST00000514110 SFMBT1Q9UHJ3 866 aa12.77□□□□□ -0.37
SNHG4-208ENST00000514110 ASPMQ8IZT6 3477 aa12.77□□□□□ -0.37
SNHG4-208ENST00000514110 GON4LQ3T8J9 2241 aa12.77□□□□□ -0.37
SNHG4-208ENST00000514110 CEP295Q9C0D2 2601 aa12.76□□□□□ -0.37
SNHG4-208ENST00000514110 SPAARA0A1B0GVQ0 90 aa12.76□□□□□ -0.37
SNHG4-208ENST00000514110 YJEFN3A6XGL0 299 aa12.76□□□□□ -0.37
SNHG4-208ENST00000514110 E7ENQ6 273 aa12.76□□□□□ -0.37
SNHG4-208ENST00000514110 NPC1O15118 1278 aa12.76□□□□□ -0.37
SNHG4-208ENST00000514110 TSPAN3O60637 253 aa12.76□□□□□ -0.37
SNHG4-208ENST00000514110 OPHN1O60890 802 aa12.76□□□□□ -0.37
SNHG4-208ENST00000514110 GABBR2O75899 941 aa12.76□□□□□ -0.37
SNHG4-208ENST00000514110 HOXD9P28356 352 aaPredicted RBP12.76□□□□□ -0.37
SNHG4-208ENST00000514110 TPMTP51580 245 aa12.76□□□□□ -0.37
SNHG4-208ENST00000514110 COPAP53621 1224 aa12.76□□□□□ -0.37
SNHG4-208ENST00000514110 YWHAEP62258 255 aaKnown RBP12.76□□□□□ -0.37
SNHG4-208ENST00000514110 FAM193AP78312 1265 aa12.76□□□□□ -0.37
SNHG4-208ENST00000514110 MPPE1Q53F39 396 aa12.76□□□□□ -0.37
SNHG4-208ENST00000514110 SYCP2LQ5T4T6 812 aa12.76□□□□□ -0.37
SNHG4-208ENST00000514110 BSPRYQ5W0U4 402 aa12.76□□□□□ -0.37
SNHG4-208ENST00000514110 TMPRSS6Q8IU80 811 aa12.76□□□□□ -0.37
SNHG4-208ENST00000514110 HOMEZQ8IX15 550 aa12.76□□□□□ -0.37
SNHG4-208ENST00000514110 UCMAQ8WVF2 138 aa12.76□□□□□ -0.37
SNHG4-208ENST00000514110 TFAP2BQ92481 460 aa12.76□□□□□ -0.37
SNHG4-208ENST00000514110 SMARCE1Q969G3 411 aa12.76□□□□□ -0.37
SNHG4-208ENST00000514110 TOE1Q96GM8 510 aaKnown RBP12.76□□□□□ -0.37
SNHG4-208ENST00000514110 IPO9Q96P70 1041 aaKnown RBP12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms