RNA–Protein interactions for RNA: ENST00000513988.1

CLDND1-229, Transcript of claudin domain containing 1, humanhuman

TSL 2

Gene CLDND1, Length 598 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-229ENST00000513988 PTPRJQ12913 1337 aa8.08□□□□□ -1.12
CLDND1-229ENST00000513988 PPEF2O14830 753 aa8.08□□□□□ -1.12
CLDND1-229ENST00000513988 XPOTO43592 962 aaKnown RBP8.08□□□□□ -1.12
CLDND1-229ENST00000513988 SLITRK3O94933 977 aa8.08□□□□□ -1.12
CLDND1-229ENST00000513988 C4BPAP04003 597 aaKnown RBP8.08□□□□□ -1.12
CLDND1-229ENST00000513988 EPHX1P07099 455 aa8.08□□□□□ -1.12
CLDND1-229ENST00000513988 ALPPL2P10696 532 aa8.08□□□□□ -1.12
CLDND1-229ENST00000513988 TYRP14679 529 aa8.08□□□□□ -1.12
CLDND1-229ENST00000513988 CYP3A5P20815 502 aa8.08□□□□□ -1.12
CLDND1-229ENST00000513988 PAX3P23760 479 aa8.08□□□□□ -1.12
CLDND1-229ENST00000513988 MCM5P33992 734 aa8.08□□□□□ -1.12
CLDND1-229ENST00000513988 GUCY2FP51841 1108 aa8.08□□□□□ -1.12
CLDND1-229ENST00000513988 ENPP2Q13822 863 aa8.08□□□□□ -1.12
CLDND1-229ENST00000513988 PPP2R5AQ15172 486 aa8.08□□□□□ -1.12
CLDND1-229ENST00000513988 SLC10A6Q3KNW5 377 aa8.08□□□□□ -1.12
CLDND1-229ENST00000513988 SCN4BQ8IWT1 228 aa8.08□□□□□ -1.12
CLDND1-229ENST00000513988 BBS7Q8IWZ6 715 aa8.08□□□□□ -1.12
CLDND1-229ENST00000513988 SLC25A45Q8N413 288 aa8.08□□□□□ -1.12
CLDND1-229ENST00000513988 FBXO39Q8N4B4 442 aa8.08□□□□□ -1.12
CLDND1-229ENST00000513988 OR2T3Q8NH03 318 aa8.08□□□□□ -1.12
CLDND1-229ENST00000513988 UCMAQ8WVF2 138 aa8.08□□□□□ -1.12
CLDND1-229ENST00000513988 APOLD1Q96LR9 279 aa8.08□□□□□ -1.12
CLDND1-229ENST00000513988 CATSPER2Q96P56 530 aa8.08□□□□□ -1.12
CLDND1-229ENST00000513988 ACO2Q99798 780 aaKnown RBP8.08□□□□□ -1.12
CLDND1-229ENST00000513988 KIFC3Q9BVG8 833 aa8.08□□□□□ -1.12
CLDND1-229ENST00000513988 USP29Q9HBJ7 922 aa8.08□□□□□ -1.12
CLDND1-229ENST00000513988 ABCB6Q9NP58 842 aa8.08□□□□□ -1.12
CLDND1-229ENST00000513988 THAP10Q9P2Z0 257 aaPredicted RBP8.08□□□□□ -1.12
CLDND1-229ENST00000513988 COL27A1Q8IZC6 1860 aaPredicted RBP8.08□□□□□ -1.12
CLDND1-229ENST00000513988 ZNF840PA6NDX5 716 aa8.07□□□□□ -1.12
CLDND1-229ENST00000513988 EFCAB7A8K855 629 aa8.07□□□□□ -1.12
CLDND1-229ENST00000513988 K7ERI5 159 aa8.07□□□□□ -1.12
CLDND1-229ENST00000513988 WNT9AO14904 365 aa8.07□□□□□ -1.12
CLDND1-229ENST00000513988 SLC37A4O43826 429 aa8.07□□□□□ -1.12
CLDND1-229ENST00000513988 TCEA3O75764 348 aa8.07□□□□□ -1.12
CLDND1-229ENST00000513988 LYPLA2O95372 231 aa8.07□□□□□ -1.12
CLDND1-229ENST00000513988 OLFM2O95897 454 aa8.07□□□□□ -1.12
CLDND1-229ENST00000513988 DNTTP04053 509 aa8.07□□□□□ -1.12
CLDND1-229ENST00000513988 CD46P15529 392 aa8.07□□□□□ -1.12
CLDND1-229ENST00000513988 PRKCHP24723 683 aa8.07□□□□□ -1.12
CLDND1-229ENST00000513988 UGT1A5P35504 534 aa8.07□□□□□ -1.12
CLDND1-229ENST00000513988 E2F5Q15329 346 aa8.07□□□□□ -1.12
CLDND1-229ENST00000513988 TTC31Q49AM3 519 aaPredicted RBP8.07□□□□□ -1.12
CLDND1-229ENST00000513988 BRICD5Q6PL45 260 aa8.07□□□□□ -1.12
CLDND1-229ENST00000513988 MOXD1Q6UVY6 613 aa8.07□□□□□ -1.12
CLDND1-229ENST00000513988 DSG4Q86SJ6 1040 aa8.07□□□□□ -1.12
CLDND1-229ENST00000513988 ZFAND4Q86XD8 727 aa8.07□□□□□ -1.12
CLDND1-229ENST00000513988 SPATS2Q86XZ4 545 aaKnown RBP8.07□□□□□ -1.12
CLDND1-229ENST00000513988 TP53INP2Q8IXH6 220 aa8.07□□□□□ -1.12
CLDND1-229ENST00000513988 TPCN2Q8NHX9 752 aa8.07□□□□□ -1.12
CLDND1-229ENST00000513988 LEO1Q8WVC0 666 aaPredicted RBP8.07□□□□□ -1.12
CLDND1-229ENST00000513988 SERAC1Q96JX3 654 aa8.07□□□□□ -1.12
CLDND1-229ENST00000513988 C5orf34Q96MH7 638 aa8.07□□□□□ -1.12
CLDND1-229ENST00000513988 C22orf23Q9BZE7 217 aa8.07□□□□□ -1.12
CLDND1-229ENST00000513988 EBF2Q9HAK2 575 aa8.07□□□□□ -1.12
CLDND1-229ENST00000513988 WDR35Q9P2L0 1181 aa8.07□□□□□ -1.12
CLDND1-229ENST00000513988 LRWD1Q9UFC0 647 aa8.07□□□□□ -1.12
CLDND1-229ENST00000513988 TP53TG5Q9Y2B4 290 aa8.07□□□□□ -1.12
CLDND1-229ENST00000513988 RTTNQ86VV8 2226 aa8.07□□□□□ -1.12
CLDND1-229ENST00000513988 COL6A5A8TX70 2615 aa8.07□□□□□ -1.12
CLDND1-229ENST00000513988 DCHS2Q6V1P9 2916 aa8.06□□□□□ -1.12
CLDND1-229ENST00000513988 SHANK1Q9Y566 2161 aa8.06□□□□□ -1.12
CLDND1-229ENST00000513988 CPED1A4D0V7 1026 aa8.06□□□□□ -1.12
CLDND1-229ENST00000513988 CYB561D2O14569 222 aa8.06□□□□□ -1.12
CLDND1-229ENST00000513988 NVLO15381 856 aaKnown RBP8.06□□□□□ -1.12
CLDND1-229ENST00000513988 MAGEC1O60732 1142 aa8.06□□□□□ -1.12
CLDND1-229ENST00000513988 CNTN5O94779 1100 aa8.06□□□□□ -1.12
CLDND1-229ENST00000513988 OAS1P00973 400 aaKnown RBP8.06□□□□□ -1.12
CLDND1-229ENST00000513988 CISD3P0C7P0 127 aa8.06□□□□□ -1.12
CLDND1-229ENST00000513988 CXCL8P10145 99 aa8.06□□□□□ -1.12
CLDND1-229ENST00000513988 DGKAP23743 735 aa8.06□□□□□ -1.12
CLDND1-229ENST00000513988 PPP3CCP48454 512 aa8.06□□□□□ -1.12
CLDND1-229ENST00000513988 HARS2P49590 506 aaKnown RBP8.06□□□□□ -1.12
CLDND1-229ENST00000513988 ZBTB16Q05516 673 aa8.06□□□□□ -1.12
CLDND1-229ENST00000513988 EIF3IQ13347 325 aaKnown RBP8.06□□□□□ -1.12
CLDND1-229ENST00000513988 ZNF234Q14588 700 aa8.06□□□□□ -1.12
CLDND1-229ENST00000513988 SMTNL2Q2TAL5 461 aa8.06□□□□□ -1.12
CLDND1-229ENST00000513988 SEZ6Q53EL9 994 aa8.06□□□□□ -1.12
CLDND1-229ENST00000513988 ANKRD45Q5TZF3 282 aa8.06□□□□□ -1.12
CLDND1-229ENST00000513988 WSCD1Q658N2 575 aa8.06□□□□□ -1.12
CLDND1-229ENST00000513988 APOA5Q6Q788 366 aa8.06□□□□□ -1.12
CLDND1-229ENST00000513988 MPZL3Q6UWV2 235 aa8.06□□□□□ -1.12
CLDND1-229ENST00000513988 SERPINA13PQ6UXR4 307 aa8.06□□□□□ -1.12
CLDND1-229ENST00000513988 TPGS1Q6ZTW0 290 aa8.06□□□□□ -1.12
CLDND1-229ENST00000513988 TAOK1Q7L7X3 1001 aa8.06□□□□□ -1.12
CLDND1-229ENST00000513988 RAB11FIP2Q7L804 512 aa8.06□□□□□ -1.12
CLDND1-229ENST00000513988 GDF7Q7Z4P5 450 aa8.06□□□□□ -1.12
CLDND1-229ENST00000513988 CCDC148Q8NFR7 591 aa8.06□□□□□ -1.12
CLDND1-229ENST00000513988 SPATA3Q8NHX4 192 aa8.06□□□□□ -1.12
CLDND1-229ENST00000513988 GANCQ8TET4 914 aa8.06□□□□□ -1.12
CLDND1-229ENST00000513988 IFT74Q96LB3 600 aa8.06□□□□□ -1.12
CLDND1-229ENST00000513988 MDFIQ99750 246 aa8.06□□□□□ -1.12
CLDND1-229ENST00000513988 PYM1Q9BRP8 204 aaKnown RBP8.06□□□□□ -1.12
CLDND1-229ENST00000513988 MRPL4Q9BYD3 311 aaKnown RBP8.06□□□□□ -1.12
CLDND1-229ENST00000513988 PLEKHA5Q9HAU0 1116 aa8.06□□□□□ -1.12
CLDND1-229ENST00000513988 EPB41L5Q9HCM4 733 aa8.06□□□□□ -1.12
CLDND1-229ENST00000513988 KCNMB3Q9NPA1 279 aa8.06□□□□□ -1.12
CLDND1-229ENST00000513988 UCKL1Q9NWZ5 548 aa8.06□□□□□ -1.12
CLDND1-229ENST00000513988 PPM1HQ9ULR3 514 aa8.06□□□□□ -1.12
CLDND1-229ENST00000513988 NCKAP1Q9Y2A7 1128 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms